BLASTX nr result

ID: Ophiopogon27_contig00052171 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00052171
         (479 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKK58548.1| hypothetical protein RhiirC2_796134 [Rhizophagus ...    50   9e-14

>gb|PKK58548.1| hypothetical protein RhiirC2_796134 [Rhizophagus irregularis]
          Length = 102

 Score = 50.1 bits (118), Expect(3) = 9e-14
 Identities = 23/30 (76%), Positives = 26/30 (86%)
 Frame = +1

Query: 214 GKKVDSLKPIAKKRLEPLFDHIPSTQIDFV 303
           GKKVDSLKPI KKRL PLFD IPST+I+ +
Sbjct: 33  GKKVDSLKPIVKKRLAPLFDRIPSTKINLL 62



 Score = 41.6 bits (96), Expect(3) = 9e-14
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = +3

Query: 306 NHPRDERSMQPTTSISDYFQQAPNPNDINIFVYP 407
           NHP DE+ MQ TT IS+YF +  + N I+IFV P
Sbjct: 64  NHPNDEKRMQATTPISNYFTENLDENMIHIFVSP 97



 Score = 32.3 bits (72), Expect(3) = 9e-14
 Identities = 15/23 (65%), Positives = 18/23 (78%)
 Frame = +2

Query: 173 HQNDNEIFVIEISREKRLIHSSP 241
           +QNDNEIFVIEISR K++    P
Sbjct: 19  NQNDNEIFVIEISRGKKVDSLKP 41


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