BLASTX nr result
ID: Ophiopogon27_contig00052121
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00052121
(612 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67821.1| hypothetical protein VITISV_025855, partial [Vit... 65 2e-26
emb|CAN81238.1| hypothetical protein VITISV_031073 [Vitis vinifera] 64 4e-26
emb|CAN78154.1| hypothetical protein VITISV_032622 [Vitis vinifera] 63 5e-26
emb|CAN61065.1| hypothetical protein VITISV_004411 [Vitis vinifera] 64 5e-26
emb|CAN62431.1| hypothetical protein VITISV_015835 [Vitis vinifera] 63 1e-25
emb|CAN74511.1| hypothetical protein VITISV_011891 [Vitis vinifera] 67 1e-25
emb|CAN64073.1| hypothetical protein VITISV_038270 [Vitis vinifera] 67 2e-25
emb|CAN64450.1| hypothetical protein VITISV_023114 [Vitis vinifera] 67 2e-25
gb|PRQ52817.1| putative RNA-directed DNA polymerase [Rosa chinen... 69 2e-25
dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Gl... 66 4e-25
emb|CAN62045.1| hypothetical protein VITISV_040357 [Vitis vinifera] 65 4e-25
gb|PRQ27363.1| putative RNA-directed DNA polymerase [Rosa chinen... 69 4e-25
emb|CAN73613.1| hypothetical protein VITISV_023299 [Vitis vinifera] 62 9e-25
gb|PNY13361.1| putative retrotransposon Ty1-copia subclass prote... 65 9e-25
gb|PRQ35129.1| putative RNA-directed DNA polymerase [Rosa chinen... 63 2e-24
emb|CAN80961.1| hypothetical protein VITISV_021825 [Vitis vinifera] 58 2e-24
gb|PNX82538.1| putative retrotransposon Ty1-copia subclass prote... 61 2e-24
gb|KYP31265.1| Retrovirus-related Pol polyprotein from transposo... 67 3e-24
gb|KZV24002.1| hypothetical protein F511_44258 [Dorcoceras hygro... 64 3e-24
gb|PRQ60635.1| putative RNA-directed DNA polymerase [Rosa chinen... 59 3e-24
>emb|CAN67821.1| hypothetical protein VITISV_025855, partial [Vitis vinifera]
Length = 1356
Score = 64.7 bits (156), Expect(3) = 2e-26
Identities = 32/71 (45%), Positives = 46/71 (64%)
Frame = +1
Query: 400 QCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH*KAIKKV 579
QCP+N ++ + + Y A+ SLMYA R DI++IV +L R NP + H KA K+V
Sbjct: 1114 QCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKAAKRV 1173
Query: 580 LRYLQRTNDYL 612
+RYLQRT +Y+
Sbjct: 1174 MRYLQRTKEYM 1184
Score = 60.1 bits (144), Expect(3) = 2e-26
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = +2
Query: 227 FLTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDIQFLTP 385
FL+KHF+MK L D VLG++I R+R++ +LGLS RTYI+K LQRY +Q P
Sbjct: 1047 FLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKP 1099
Score = 42.7 bits (99), Expect(3) = 2e-26
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +3
Query: 57 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 209
+++ + GF N +D C V K SGS++I LV YVDDILL +NDI +
Sbjct: 996 QIIVSYGFEANLMDEC------VYHKFSGSKYIFLVLYVDDILLATNDISI 1040
>emb|CAN81238.1| hypothetical protein VITISV_031073 [Vitis vinifera]
Length = 1354
Score = 63.5 bits (153), Expect(3) = 4e-26
Identities = 31/71 (43%), Positives = 46/71 (64%)
Frame = +1
Query: 400 QCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH*KAIKKV 579
QCP+N ++ + + Y A+ SLMYA R DI++IV +L R NP + H +A K+V
Sbjct: 1112 QCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRV 1171
Query: 580 LRYLQRTNDYL 612
+RYLQRT +Y+
Sbjct: 1172 MRYLQRTKEYM 1182
Score = 60.1 bits (144), Expect(3) = 4e-26
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = +2
Query: 227 FLTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDIQFLTP 385
FL+KHF+MK L D VLG++I R+R++ +LGLS RTYI+K LQRY +Q P
Sbjct: 1045 FLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKP 1097
Score = 42.7 bits (99), Expect(3) = 4e-26
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +3
Query: 57 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 209
+++ + GF N +D C V K SGS++I LV YVDDILL +NDI +
Sbjct: 994 QIIVSYGFEANLMDEC------VYHKFSGSKYIFLVLYVDDILLATNDISI 1038
>emb|CAN78154.1| hypothetical protein VITISV_032622 [Vitis vinifera]
Length = 1250
Score = 63.2 bits (152), Expect(3) = 5e-26
Identities = 31/71 (43%), Positives = 46/71 (64%)
Frame = +1
Query: 400 QCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH*KAIKKV 579
QCP+N ++ + + Y A+ SLMYA R DI++IV +L R NP + H +A K+V
Sbjct: 1008 QCPKNXLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRV 1067
Query: 580 LRYLQRTNDYL 612
+RYLQRT +Y+
Sbjct: 1068 MRYLQRTKEYM 1078
Score = 60.1 bits (144), Expect(3) = 5e-26
Identities = 30/53 (56%), Positives = 40/53 (75%)
Frame = +2
Query: 227 FLTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDIQFLTP 385
FL+KHF+MK L D VLG++I R+R++ +LGLS RTYI+K LQRY +Q P
Sbjct: 941 FLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKP 993
Score = 42.7 bits (99), Expect(3) = 5e-26
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +3
Query: 57 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 209
+++ + GF N +D C V K SGS++I LV YVDDILL +NDI +
Sbjct: 890 QIIVSYGFEANLMDEC------VYHKFSGSKYIFLVLYVDDILLATNDIXI 934
>emb|CAN61065.1| hypothetical protein VITISV_004411 [Vitis vinifera]
Length = 872
Score = 63.5 bits (153), Expect(3) = 5e-26
Identities = 31/71 (43%), Positives = 46/71 (64%)
Frame = +1
Query: 400 QCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH*KAIKKV 579
QCP+N ++ + + Y A+ SLMYA R DI++IV +L R NP + H +A K+V
Sbjct: 651 QCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWRAAKRV 710
Query: 580 LRYLQRTNDYL 612
+RYLQRT +Y+
Sbjct: 711 MRYLQRTKEYM 721
Score = 59.7 bits (143), Expect(3) = 5e-26
Identities = 29/49 (59%), Positives = 39/49 (79%)
Frame = +2
Query: 227 FLTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDIQ 373
FL+KHF+MK L D VLG++I R+R++ +LGLS RTYI+K LQRY +Q
Sbjct: 584 FLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQ 632
Score = 42.7 bits (99), Expect(3) = 5e-26
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +3
Query: 57 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 209
+++ + GF N +D C V K SGS++I LV YVDDILL +NDI +
Sbjct: 533 QIIVSYGFEANLMDEC------VYHKFSGSKYIFLVLYVDDILLATNDISI 577
>emb|CAN62431.1| hypothetical protein VITISV_015835 [Vitis vinifera]
Length = 1217
Score = 63.2 bits (152), Expect(3) = 1e-25
Identities = 31/71 (43%), Positives = 46/71 (64%)
Frame = +1
Query: 400 QCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH*KAIKKV 579
QCP+N ++ + + Y A+ SLMYA R DI++IV +L R NP + H +A K+V
Sbjct: 1018 QCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPRMDHWRAAKRV 1077
Query: 580 LRYLQRTNDYL 612
+RYLQRT +Y+
Sbjct: 1078 MRYLQRTKEYM 1088
Score = 58.9 bits (141), Expect(3) = 1e-25
Identities = 28/53 (52%), Positives = 40/53 (75%)
Frame = +2
Query: 227 FLTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDIQFLTP 385
FL+KHF+MK + D +LG++I R+R++ +LGLS RTYI+K LQRY +Q P
Sbjct: 951 FLSKHFEMKDIGDASFILGIQIHRDRSRGILGLSQRTYIDKVLQRYGMQNSKP 1003
Score = 42.7 bits (99), Expect(3) = 1e-25
Identities = 23/51 (45%), Positives = 32/51 (62%)
Frame = +3
Query: 57 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 209
+++ + GF N +D C V K SGS++I LV YVDDILL +NDI +
Sbjct: 900 QIIVSYGFEANLMDEC------VYHKFSGSKYIFLVLYVDDILLATNDISI 944
>emb|CAN74511.1| hypothetical protein VITISV_011891 [Vitis vinifera]
Length = 1283
Score = 66.6 bits (161), Expect(3) = 1e-25
Identities = 33/71 (46%), Positives = 47/71 (66%)
Frame = +1
Query: 400 QCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH*KAIKKV 579
QCP+N++++K + Y A+ SLMYA R DI++IV +L R NP + H K K+V
Sbjct: 1041 QCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRV 1100
Query: 580 LRYLQRTNDYL 612
+RYLQRT DY+
Sbjct: 1101 MRYLQRTKDYM 1111
Score = 51.2 bits (121), Expect(3) = 1e-25
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +3
Query: 57 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 209
+V+T+ GF +N VD CI + K SGS+FIILV YVDDILL S+D+ L
Sbjct: 923 QVITSFGFKENTVDQCIYL------KFSGSKFIILVLYVDDILLASSDVXL 967
Score = 46.6 bits (109), Expect(3) = 1e-25
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +2
Query: 227 FLTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDIQFLTP 385
FL+ FDMK L + VLG++I R+R++ +LGLS + YI+K L R+ + P
Sbjct: 974 FLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSNCAP 1026
>emb|CAN64073.1| hypothetical protein VITISV_038270 [Vitis vinifera]
Length = 1181
Score = 66.6 bits (161), Expect(3) = 2e-25
Identities = 33/71 (46%), Positives = 47/71 (66%)
Frame = +1
Query: 400 QCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH*KAIKKV 579
QCP+N++++K + Y A+ SLMYA R DI++IV +L R NP + H K K+V
Sbjct: 939 QCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRV 998
Query: 580 LRYLQRTNDYL 612
+RYLQRT DY+
Sbjct: 999 MRYLQRTKDYM 1009
Score = 50.8 bits (120), Expect(3) = 2e-25
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +3
Query: 57 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 209
+V+T+ GF +N VD CI + K SGS+FIILV YVDDILL S+D+ L
Sbjct: 821 QVITSFGFKENTVDQCIYL------KFSGSKFIILVLYVDDILLASSDVGL 865
Score = 46.6 bits (109), Expect(3) = 2e-25
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +2
Query: 227 FLTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDIQFLTP 385
FL+ FDMK L + VLG++I R+R++ +LGLS + YI+K L R+ + P
Sbjct: 872 FLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSNCAP 924
>emb|CAN64450.1| hypothetical protein VITISV_023114 [Vitis vinifera]
Length = 738
Score = 66.6 bits (161), Expect(3) = 2e-25
Identities = 33/71 (46%), Positives = 47/71 (66%)
Frame = +1
Query: 400 QCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH*KAIKKV 579
QCP+N++++K + Y A+ SLMYA R DI++IV +L R NP + H K K+V
Sbjct: 653 QCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRV 712
Query: 580 LRYLQRTNDYL 612
+RYLQRT DY+
Sbjct: 713 MRYLQRTKDYM 723
Score = 50.8 bits (120), Expect(3) = 2e-25
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +3
Query: 57 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 209
+V+T+ GF +N VD CI + K SGS+FIILV YVDDILL S+D+ L
Sbjct: 535 QVITSFGFKENTVDQCIYL------KFSGSKFIILVLYVDDILLASSDVGL 579
Score = 46.6 bits (109), Expect(3) = 2e-25
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +2
Query: 227 FLTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDIQFLTP 385
FL+ FDMK L + VLG++I R+R++ +LGLS + YI+K L R+ + P
Sbjct: 586 FLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSNCAP 638
>gb|PRQ52817.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 538
Score = 68.6 bits (166), Expect(3) = 2e-25
Identities = 35/71 (49%), Positives = 47/71 (66%)
Frame = +1
Query: 400 QCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH*KAIKKV 579
QCPQN+++RK + Y A+ SL+YA + R DIS V +L R Q NP + H KA KKV
Sbjct: 300 QCPQNELERKGMERIPYASAVGSLVYAQTCTRPDISFAVGMLGRYQSNPGMDHWKATKKV 359
Query: 580 LRYLQRTNDYL 612
+RYLQ T +Y+
Sbjct: 360 MRYLQGTKEYM 370
Score = 49.7 bits (117), Expect(3) = 2e-25
Identities = 22/53 (41%), Positives = 39/53 (73%)
Frame = +2
Query: 227 FLTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDIQFLTP 385
FL+K F+MK + + V+G++I R+R++ LLGLS + YIE+ L+R+ ++ +P
Sbjct: 233 FLSKKFEMKDMGEASYVIGIEIFRDRSRGLLGLSQKAYIERVLERFGMEKCSP 285
Score = 45.4 bits (106), Expect(3) = 2e-25
Identities = 25/49 (51%), Positives = 33/49 (67%)
Frame = +3
Query: 63 VTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 209
V + GF +N VD CI + K+SGS+FI L+ YVDDILL S+D+ L
Sbjct: 184 VVSFGFKENIVDRCIYL------KVSGSKFIFLILYVDDILLASSDLGL 226
>dbj|BAG72096.1| Gag-protease-integrase-RT-RNaseH polyprotein [Glycine max]
Length = 1321
Score = 66.2 bits (160), Expect(3) = 4e-25
Identities = 34/74 (45%), Positives = 45/74 (60%)
Frame = +1
Query: 391 NFIQCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH*KAI 570
N QCP+N +R+ + + Y + SLMYA R DI+ V +L R Q NP + H +A
Sbjct: 1080 NLNQCPKNDFEREQMKNIPYASVVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGIDHWRAA 1139
Query: 571 KKVLRYLQRTNDYL 612
KKVLRYLQ T DY+
Sbjct: 1140 KKVLRYLQGTKDYM 1153
Score = 52.8 bits (125), Expect(3) = 4e-25
Identities = 25/53 (47%), Positives = 39/53 (73%)
Frame = +2
Query: 227 FLTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDIQFLTP 385
FL+K+FDMK + D V+G+KI R+R++ +LGLS TYI K L+R+ ++ +P
Sbjct: 1016 FLSKNFDMKDMGDASYVIGIKIHRDRSRGILGLSQETYINKILERFRMKDCSP 1068
Score = 43.9 bits (102), Expect(3) = 4e-25
Identities = 22/47 (46%), Positives = 31/47 (65%)
Frame = +3
Query: 60 VVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSND 200
++++ GF +NP+D CI K+SGS+ LV YVDDILL +ND
Sbjct: 966 IISSFGFDENPMDQCIY------HKVSGSKICFLVLYVDDILLAAND 1006
>emb|CAN62045.1| hypothetical protein VITISV_040357 [Vitis vinifera]
Length = 1290
Score = 64.7 bits (156), Expect(3) = 4e-25
Identities = 34/71 (47%), Positives = 45/71 (63%)
Frame = +1
Query: 400 QCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH*KAIKKV 579
QCP+NK++ K + Y AI SLMYA R DI++IV +L R P + H K K+V
Sbjct: 1065 QCPKNKLENKDMERFPYASAIGSLMYAQVCTRPDIAYIVGMLGRYLSYPGMDHWKKAKRV 1124
Query: 580 LRYLQRTNDYL 612
+RYLQRT DY+
Sbjct: 1125 MRYLQRTKDYM 1135
Score = 51.6 bits (122), Expect(3) = 4e-25
Identities = 29/51 (56%), Positives = 36/51 (70%)
Frame = +3
Query: 57 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 209
+V+T+ GF KN VD CI + K SGS+FIILV YVDDILL S+D+ L
Sbjct: 947 QVITSFGFKKNIVDQCIYL------KFSGSKFIILVLYVDDILLASSDVGL 991
Score = 46.6 bits (109), Expect(3) = 4e-25
Identities = 23/53 (43%), Positives = 35/53 (66%)
Frame = +2
Query: 227 FLTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDIQFLTP 385
FL+ FDMK L + VLG++I R+R++ +LGLS + YI+K L R+ + P
Sbjct: 998 FLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSNCAP 1050
>gb|PRQ27363.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 1046
Score = 69.3 bits (168), Expect(3) = 4e-25
Identities = 35/71 (49%), Positives = 46/71 (64%)
Frame = +1
Query: 400 QCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH*KAIKKV 579
QCPQN ++R+ + +K Y + SLMYA R D+++ V IL R Q NP H A KK+
Sbjct: 804 QCPQNDIERENMKTKPYAQLVGSLMYAQVCTRPDLAYAVGILSRFQSNPGPEHWIAGKKI 863
Query: 580 LRYLQRTNDYL 612
LRYLQRT D+L
Sbjct: 864 LRYLQRTKDHL 874
Score = 53.1 bits (126), Expect(3) = 4e-25
Identities = 27/49 (55%), Positives = 36/49 (73%)
Frame = +2
Query: 227 FLTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDIQ 373
FL+K FDMK L + VLG++I R+R K LLGLS + YI K L+R+D+Q
Sbjct: 737 FLSKKFDMKDLGEASYVLGIEIKRDRTKCLLGLSQQGYINKVLKRFDMQ 785
Score = 40.4 bits (93), Expect(3) = 4e-25
Identities = 23/50 (46%), Positives = 29/50 (58%)
Frame = +3
Query: 60 VVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 209
VV+ GF +N VD C+ + KI G FI L+ YVDDILL S + L
Sbjct: 687 VVSNFGFKENQVDECVYM------KIEGKNFIFLILYVDDILLASTSLKL 730
>emb|CAN73613.1| hypothetical protein VITISV_023299 [Vitis vinifera]
Length = 1815
Score = 61.6 bits (148), Expect(3) = 9e-25
Identities = 30/71 (42%), Positives = 45/71 (63%)
Frame = +1
Query: 400 QCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH*KAIKKV 579
QCP+N ++ + + Y A+ SLMYA R DI++I +L R NP + H +A K+V
Sbjct: 1070 QCPKNSLESQEMQKIPYASAVGSLMYAQVCTRPDIAYIXGMLGRYLSNPGMDHWRAAKRV 1129
Query: 580 LRYLQRTNDYL 612
+RYLQRT +Y+
Sbjct: 1130 MRYLQRTKEYM 1140
Score = 57.8 bits (138), Expect(3) = 9e-25
Identities = 29/53 (54%), Positives = 39/53 (73%)
Frame = +2
Query: 227 FLTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDIQFLTP 385
FL+KHF+MK L D VLG++I R+R++ +LGLS RTYI+K LQ Y +Q P
Sbjct: 1003 FLSKHFEMKDLGDASFVLGIQIHRDRSRGILGLSQRTYIDKVLQXYGMQNSKP 1055
Score = 42.4 bits (98), Expect(3) = 9e-25
Identities = 20/33 (60%), Positives = 25/33 (75%)
Frame = +3
Query: 111 VDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 209
+D CV K SGS++I LV YVDDILL +NDI +
Sbjct: 964 MDECVYHKFSGSKYIFLVLYVDDILLATNDISI 996
>gb|PNY13361.1| putative retrotransposon Ty1-copia subclass protein [Trifolium
pratense]
Length = 1385
Score = 65.5 bits (158), Expect(3) = 9e-25
Identities = 33/69 (47%), Positives = 45/69 (65%)
Frame = +1
Query: 400 QCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH*KAIKKV 579
QCP+N+V++ +N + + A+ SLMYA R DI+ +V +L R Q NP H KA KKV
Sbjct: 1143 QCPKNEVEQAEMNDRPFASALGSLMYAQVCTRPDIAFVVGVLGRYQANPGNDHWKAAKKV 1202
Query: 580 LRYLQRTND 606
+RYLQ T D
Sbjct: 1203 MRYLQGTKD 1211
Score = 48.9 bits (115), Expect(3) = 9e-25
Identities = 23/52 (44%), Positives = 37/52 (71%)
Frame = +2
Query: 230 LTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDIQFLTP 385
LT+ FDMK L + VLG++I R+R+++ LGLS + YI + L+R+++Q P
Sbjct: 1077 LTRFFDMKDLGEASFVLGIEIHRDRSRHTLGLSQKAYINRVLERFNMQNCRP 1128
Score = 47.4 bits (111), Expect(3) = 9e-25
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = +3
Query: 60 VVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDI 203
VVT+ GF +N VD CI K+SGS++I LV YVDDILL SN++
Sbjct: 1026 VVTSLGFEENKVDQCIYF------KVSGSKYIFLVLYVDDILLASNNL 1067
>gb|PRQ35129.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 718
Score = 62.8 bits (151), Expect(3) = 2e-24
Identities = 33/71 (46%), Positives = 44/71 (61%)
Frame = +1
Query: 400 QCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH*KAIKKV 579
QCP+N ++++ + K Y + SLMYA R DI++ V +L R Q NP H A KKV
Sbjct: 472 QCPRNNLEQESMKDKPYASLVGSLMYAQVCTRPDIAYSVGMLGRFQTNPGHAHWVAGKKV 531
Query: 580 LRYLQRTNDYL 612
LRYLQ T D+L
Sbjct: 532 LRYLQGTRDHL 542
Score = 49.3 bits (116), Expect(3) = 2e-24
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +2
Query: 227 FLTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDIQFLTP 385
FL+++F+MK L + VLG++I R+R K LLGLS + YI+K L+R+ + P
Sbjct: 405 FLSRNFEMKDLGEASYVLGIEICRDRKKGLLGLSQKNYIDKVLKRFKMDKCAP 457
Score = 48.9 bits (115), Expect(3) = 2e-24
Identities = 25/50 (50%), Positives = 36/50 (72%)
Frame = +3
Query: 60 VVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 209
V+ ++GF +NP+D C+ + KISGS+FI LV YVDDILL ++D+ L
Sbjct: 355 VMVSHGFVENPLDECVYL------KISGSKFIFLVLYVDDILLANSDLSL 398
>emb|CAN80961.1| hypothetical protein VITISV_021825 [Vitis vinifera]
Length = 849
Score = 58.2 bits (139), Expect(3) = 2e-24
Identities = 33/71 (46%), Positives = 42/71 (59%)
Frame = +1
Query: 400 QCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH*KAIKKV 579
QCPQN +R+ + + Y + SLMYA R DI+ +V +L R N H KA KKV
Sbjct: 669 QCPQNDDEREEMRTIPYSSVVGSLMYAQVCTRPDIAFVVGMLGRSLSNLGSQHWKAAKKV 728
Query: 580 LRYLQRTNDYL 612
LRYLQRT D +
Sbjct: 729 LRYLQRTKDLM 739
Score = 51.6 bits (122), Expect(3) = 2e-24
Identities = 26/47 (55%), Positives = 35/47 (74%)
Frame = +2
Query: 230 LTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDI 370
L+ HFDMK L + VLG+KILR+RA +L LS R YIEK L+R+++
Sbjct: 603 LSTHFDMKDLGETSYVLGIKILRDRANGVLKLSQRAYIEKILKRFNM 649
Score = 50.8 bits (120), Expect(3) = 2e-24
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = +3
Query: 57 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSND 200
R++T NGF +N VD CI + ++SGS +I LV YVDDILL SND
Sbjct: 551 RIITQNGFKENTVDRCIYL------RVSGSSYIFLVLYVDDILLASND 592
>gb|PNX82538.1| putative retrotransposon Ty1-copia subclass protein, partial
[Trifolium pratense]
Length = 620
Score = 61.2 bits (147), Expect(3) = 2e-24
Identities = 36/78 (46%), Positives = 43/78 (55%)
Frame = +1
Query: 379 DTLKNFIQCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH 558
D L N CPQN + + Y A+ SLMYA R DI+ V L R NP + H
Sbjct: 514 DKLSNS-NCPQNDKETVEMEKVPYASAVGSLMYAQVCTRPDIAFAVNYLGRYLSNPGLGH 572
Query: 559 *KAIKKVLRYLQRTNDYL 612
KA+KKVLRYLQ T DY+
Sbjct: 573 WKAVKKVLRYLQGTKDYM 590
Score = 53.5 bits (127), Expect(3) = 2e-24
Identities = 25/52 (48%), Positives = 38/52 (73%)
Frame = +2
Query: 230 LTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDIQFLTP 385
L+ HFDMK L D VLG++I R+R++ +LGLS + YIEK L+R+++ +P
Sbjct: 454 LSSHFDMKDLGDASVVLGIQIFRDRSRGVLGLSQKGYIEKILKRFNMHSCSP 505
Score = 45.8 bits (107), Expect(3) = 2e-24
Identities = 28/51 (54%), Positives = 34/51 (66%)
Frame = +3
Query: 57 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 209
+VVT+ GF +N D CI + K SGS FIILV YVDDILL S+ I+L
Sbjct: 402 QVVTSFGFKENASDQCIYL------KTSGSNFIILVLYVDDILLASSCINL 446
>gb|KYP31265.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 425
Score = 67.4 bits (163), Expect(3) = 3e-24
Identities = 34/71 (47%), Positives = 46/71 (64%)
Frame = +1
Query: 400 QCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH*KAIKKV 579
QCP+N ++R+ + + Y A+ SLMYA R DI+ V +L R Q NP V H KA KKV
Sbjct: 187 QCPKNNLEREHMKNIPYASAVGSLMYAQVCTRPDIAFAVGVLGRYQSNPGVDHWKAAKKV 246
Query: 580 LRYLQRTNDYL 612
+RYLQ T D++
Sbjct: 247 MRYLQGTKDFM 257
Score = 52.0 bits (123), Expect(3) = 3e-24
Identities = 24/53 (45%), Positives = 39/53 (73%)
Frame = +2
Query: 227 FLTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDIQFLTP 385
FL+K+FDMK + + V+G+KI R R++ +LGLS TYI K L+R++++ +P
Sbjct: 120 FLSKNFDMKDMGEASYVIGIKIHRERSRGILGLSQETYINKVLERFNMKDCSP 172
Score = 40.4 bits (93), Expect(3) = 3e-24
Identities = 22/47 (46%), Positives = 30/47 (63%)
Frame = +3
Query: 60 VVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSND 200
V+++ GF +N +D C V K+SGS+ LV YVDDILL +ND
Sbjct: 70 VISSFGFEENIMDQC------VYQKVSGSKICFLVLYVDDILLATND 110
>gb|KZV24002.1| hypothetical protein F511_44258 [Dorcoceras hygrometricum]
Length = 410
Score = 63.9 bits (154), Expect(3) = 3e-24
Identities = 32/69 (46%), Positives = 44/69 (63%)
Frame = +1
Query: 400 QCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH*KAIKKV 579
QCP+N ++K I Y A+ SLMYA R DI+++ +L R NP + H KA+K+V
Sbjct: 187 QCPKNDFEKKEIEKIPYASAVGSLMYAQVCTRPDIAYVTGMLGRYLSNPGMEHWKAVKRV 246
Query: 580 LRYLQRTND 606
LRYLQRT +
Sbjct: 247 LRYLQRTKN 255
Score = 52.8 bits (125), Expect(3) = 3e-24
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +2
Query: 227 FLTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDIQFLTP 385
FL+KHF+MK L D VLG++I R R+ +LGLS + YIEK L+RY + P
Sbjct: 120 FLSKHFEMKDLGDASFVLGIQIHRARSHGILGLSQKNYIEKVLKRYGMHDCKP 172
Score = 43.1 bits (100), Expect(3) = 3e-24
Identities = 26/51 (50%), Positives = 31/51 (60%)
Frame = +3
Query: 57 RVVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSNDIHL 209
+V+ + GF N VD C V K +GS+ I LV YVDDILL SNDI L
Sbjct: 69 QVIISFGFEMNMVDDC------VYHKFNGSKHIFLVLYVDDILLASNDIEL 113
>gb|PRQ60635.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 260
Score = 58.9 bits (141), Expect(3) = 3e-24
Identities = 30/70 (42%), Positives = 45/70 (64%)
Frame = +1
Query: 400 QCPQNKVDRKLINSKEYVYAIDSLMYAMSYIRSDISHIVEILRRLQ*NPDVIH*KAIKKV 579
QCP+N+++++ + +K Y + SLMYA R D+++ V +L R Q NP H A KKV
Sbjct: 187 QCPKNELEKEDMKTKPYSRLVGSLMYAQVCTRPDLAYAVGMLARFQSNPGHEHWIAGKKV 246
Query: 580 LRYLQRTNDY 609
LRYLQ++ Y
Sbjct: 247 LRYLQKSKGY 256
Score = 55.5 bits (132), Expect(3) = 3e-24
Identities = 26/53 (49%), Positives = 40/53 (75%)
Frame = +2
Query: 227 FLTKHFDMKVLSDDHTVLGVKILRNRAKYLLGLSLRTYIEKDLQRYDIQFLTP 385
FL+++FDMK L D VLG++I R+R+K+LLGLS + YI K L+R+++ +P
Sbjct: 120 FLSENFDMKDLGDASYVLGIEITRDRSKHLLGLSQQAYISKVLKRFEMHTCSP 172
Score = 45.4 bits (106), Expect(3) = 3e-24
Identities = 26/47 (55%), Positives = 31/47 (65%)
Frame = +3
Query: 60 VVTANGFGKNPVDLCINVDLCVCPKISGSRFIILV*YVDDILLVSND 200
VVT++GF +N VD C+ + KISG FI LV YVDDILL S D
Sbjct: 70 VVTSSGFVENLVDECVYM------KISGRNFIFLVLYVDDILLASTD 110