BLASTX nr result

ID: Ophiopogon27_contig00052106 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00052106
         (390 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKC66575.1| hypothetical protein RhiirA1_394379 [Rhizophagus ...   101   9e-23
gb|PKY56681.1| hypothetical protein RhiirA4_103565 [Rhizophagus ...   101   9e-23
gb|EXX54268.1| hypothetical protein RirG_236180 [Rhizophagus irr...   101   9e-23
dbj|GBC53865.1| coiled-coil domain-containing protein r3hcc1l [R...    69   5e-11

>gb|PKC66575.1| hypothetical protein RhiirA1_394379 [Rhizophagus irregularis]
 gb|POG75105.1| hypothetical protein GLOIN_2v1770712 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 418

 Score =  101 bits (252), Expect = 9e-23
 Identities = 54/106 (50%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
 Frame = +3

Query: 39  NNISDEVAKVAVSLXXXXXXXXXXXXRPAAQSTTNDSTLSTSQGQQTVEEWEKYTDGDVK 218
           NN+SD+V KV  SL             P +QSTTNDST S SQGQQ VEEWEK+ D +VK
Sbjct: 142 NNVSDDVTKVTASLENITIGENKNESNPTSQSTTNDSTSSASQGQQIVEEWEKHADSEVK 201

Query: 219 VKNAAN-XXXXXXXXXXXDGNSNPFDWQNRQKEGQKNDISPKNENR 353
           +K+  +            DGN NPFDW NRQKEG      PKNENR
Sbjct: 202 IKSPVSPVSPVSSVASPADGNPNPFDWSNRQKEG------PKNENR 241


>gb|PKY56681.1| hypothetical protein RhiirA4_103565 [Rhizophagus irregularis]
          Length = 419

 Score =  101 bits (252), Expect = 9e-23
 Identities = 54/106 (50%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
 Frame = +3

Query: 39  NNISDEVAKVAVSLXXXXXXXXXXXXRPAAQSTTNDSTLSTSQGQQTVEEWEKYTDGDVK 218
           NN+SD+V KV  SL             P +QSTTNDST S SQGQQ VEEWEK+ D +VK
Sbjct: 143 NNVSDDVTKVTASLENITIGENKNESNPTSQSTTNDSTSSASQGQQIVEEWEKHADSEVK 202

Query: 219 VKNAAN-XXXXXXXXXXXDGNSNPFDWQNRQKEGQKNDISPKNENR 353
           +K+  +            DGN NPFDW NRQKEG      PKNENR
Sbjct: 203 IKSPVSPVSPVSSVASPADGNPNPFDWSNRQKEG------PKNENR 242


>gb|EXX54268.1| hypothetical protein RirG_236180 [Rhizophagus irregularis DAOM
           197198w]
 gb|PKC09810.1| hypothetical protein RhiirA5_151605 [Rhizophagus irregularis]
 gb|PKY19328.1| hypothetical protein RhiirB3_129005 [Rhizophagus irregularis]
          Length = 419

 Score =  101 bits (252), Expect = 9e-23
 Identities = 54/106 (50%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
 Frame = +3

Query: 39  NNISDEVAKVAVSLXXXXXXXXXXXXRPAAQSTTNDSTLSTSQGQQTVEEWEKYTDGDVK 218
           NN+SD+V KV  SL             P +QSTTNDST S SQGQQ VEEWEK+ D +VK
Sbjct: 143 NNVSDDVTKVTASLENITIGENKNESNPTSQSTTNDSTSSASQGQQIVEEWEKHADSEVK 202

Query: 219 VKNAAN-XXXXXXXXXXXDGNSNPFDWQNRQKEGQKNDISPKNENR 353
           +K+  +            DGN NPFDW NRQKEG      PKNENR
Sbjct: 203 IKSPVSPVSPVSSVASPADGNPNPFDWSNRQKEG------PKNENR 242


>dbj|GBC53865.1| coiled-coil domain-containing protein r3hcc1l [Rhizophagus
           irregularis DAOM 181602]
          Length = 394

 Score = 68.9 bits (167), Expect = 5e-11
 Identities = 42/106 (39%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
 Frame = +3

Query: 39  NNISDEVAKVAVSLXXXXXXXXXXXXRPAAQSTTNDSTLSTSQGQQTVEEWEKYTDGDVK 218
           NN+SD+V KV  SL                         + + GQQ VEEWEK+ D +VK
Sbjct: 142 NNVSDDVTKVTASLE------------------------NITIGQQIVEEWEKHADSEVK 177

Query: 219 VKNAANXXXXXXXXXXX-DGNSNPFDWQNRQKEGQKNDISPKNENR 353
           +K+  +            DGN NPFDW NRQKEG      PKNENR
Sbjct: 178 IKSPVSPVSPVSSVASPADGNPNPFDWSNRQKEG------PKNENR 217


Top