BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00051039
         (448 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC10903.1| DNA-directed RNA polymerase III subunit RPC8 [Rh...   288   1e-96
gb|PKC08887.1| DNA-directed RNA polymerase III subunit RPC8 [Rhi...   120   2e-31

>dbj|GBC10903.1| DNA-directed RNA polymerase III subunit RPC8 [Rhizophagus
           irregularis DAOM 181602]
 gb|PKK74418.1| hypothetical protein RhiirC2_738862 [Rhizophagus irregularis]
 gb|POG62732.1| hypothetical protein GLOIN_2v1693406 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 278

 Score =  288 bits (738), Expect = 1e-96
 Identities = 142/143 (99%), Positives = 143/143 (100%)
 Frame = -1

Query: 448 ENLWKSAEDKYLYMYMDKDQSIKFRVIEENFTDIGTKGPPPKRTGAVAGQKVPQPGSSSL 269
           ENLWKSAEDKYLYMYMDKDQSIKFRVIEENFTDIGTKGPPPKRTGAVAGQKVPQPGSSSL
Sbjct: 136 ENLWKSAEDKYLYMYMDKDQSIKFRVIEENFTDIGTKGPPPKRTGAVAGQKVPQPGSSSL 195

Query: 268 PSDVMIVGNNKSVTNIQPPNIVNADTTTGSNVIGGANATSVQQESKLLGAATTSSTYKLK 89
           PSDVMIVGNNKSVTNIQPPNIVNADTTTGSNVIGGANATSVQQESKLLGAATTSSTYKLK
Sbjct: 196 PSDVMIVGNNKSVTNIQPPNIVNADTTTGSNVIGGANATSVQQESKLLGAATTSSTYKLK 255

Query: 88  QAPYEIIGSIAEVGLGLTSWAWD 20
           QAPYEI+GSIAEVGLGLTSWAWD
Sbjct: 256 QAPYEIVGSIAEVGLGLTSWAWD 278


>gb|PKC08887.1| DNA-directed RNA polymerase III subunit RPC8 [Rhizophagus
           irregularis]
 gb|PKC72085.1| DNA-directed RNA polymerase III subunit RPC8 [Rhizophagus
           irregularis]
 gb|PKY18180.1| DNA-directed RNA polymerase III subunit RPC8 [Rhizophagus
           irregularis]
 gb|PKY46783.1| DNA-directed RNA polymerase III subunit RPC8 [Rhizophagus
           irregularis]
          Length = 212

 Score =  120 bits (302), Expect = 2e-31
 Identities = 57/68 (83%), Positives = 59/68 (86%)
 Frame = -1

Query: 448 ENLWKSAEDKYLYMYMDKDQSIKFRVIEENFTDIGTKGPPPKRTGAVAGQKVPQPGSSSL 269
           ENLWKSAEDKYLYMYMDKDQSIKFRVIEENFTDIGTKGPPPKRTGAVAGQKVPQP    +
Sbjct: 136 ENLWKSAEDKYLYMYMDKDQSIKFRVIEENFTDIGTKGPPPKRTGAVAGQKVPQPAPYEI 195

Query: 268 PSDVMIVG 245
              +  VG
Sbjct: 196 VGSIAEVG 203