BLASTX nr result

ID: Ophiopogon27_contig00050893 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00050893
         (503 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX70576.1| Utp18p [Rhizophagus irregularis DAOM 197198w] >gi...   213   4e-63
gb|POG79453.1| hypothetical protein GLOIN_2v506596 [Rhizophagus ...   139   3e-39
gb|EXX70577.1| Utp18p [Rhizophagus irregularis DAOM 197198w]           72   2e-11

>gb|EXX70576.1| Utp18p [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC20921.1| U3 small nucleolar RNA-associated protein 18 [Rhizophagus
           irregularis DAOM 181602]
          Length = 605

 Score =  213 bits (543), Expect = 4e-63
 Identities = 111/144 (77%), Positives = 111/144 (77%)
 Frame = +2

Query: 71  IEKDERYNPLDALADKFIDLSELRQKHRGSPPKGVXXXXXXXXXXXXXYKSESGVRQNVR 250
           IEKDERYNPLDALADKFIDLSELRQKHRGSPPKGV             YKSE G RQNVR
Sbjct: 31  IEKDERYNPLDALADKFIDLSELRQKHRGSPPKGVLELELEALVFEDLYKSEGGARQNVR 90

Query: 251 QKDNVSKQVESSAKEGEEFETPTENAENNLHAFDTVSPVPYSIDISPXXXXXXXXXXXXX 430
           QKDNVSKQVESSAKEGEEFETPTENAENNLHAFDTVSPVPYSIDISP             
Sbjct: 91  QKDNVSKQVESSAKEGEEFETPTENAENNLHAFDTVSPVPYSIDISPETYENINDNMNTE 150

Query: 431 XXXHLGDDSNSKESEMKNRKTNSE 502
              HL DD NSKESEMKNRKTNSE
Sbjct: 151 ENDHLVDDCNSKESEMKNRKTNSE 174


>gb|POG79453.1| hypothetical protein GLOIN_2v506596 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 151

 Score =  139 bits (351), Expect = 3e-39
 Identities = 70/84 (83%), Positives = 70/84 (83%)
 Frame = -3

Query: 336 LFSAFSVGVSNSSPSLADDSTCFDTLSFCLTFCLTPLSDLYRXXXXXXXXXXXXTPFGGE 157
           LFSAFSVGVSNSSPSLADDSTCFDTLSFCLTFCL P SDLYR            TPFGGE
Sbjct: 6   LFSAFSVGVSNSSPSLADDSTCFDTLSFCLTFCLAPPSDLYRSSNTNASSSNSNTPFGGE 65

Query: 156 PLCFCRNSLKSMNLSANASRGLYR 85
           PLCFCRNSLKSMNLSANASRGLYR
Sbjct: 66  PLCFCRNSLKSMNLSANASRGLYR 89


>gb|EXX70577.1| Utp18p [Rhizophagus irregularis DAOM 197198w]
          Length = 491

 Score = 71.6 bits (174), Expect = 2e-11
 Identities = 37/55 (67%), Positives = 37/55 (67%)
 Frame = +2

Query: 338 LHAFDTVSPVPYSIDISPXXXXXXXXXXXXXXXXHLGDDSNSKESEMKNRKTNSE 502
           LHAFDTVSPVPYSIDISP                HL DD NSKESEMKNRKTNSE
Sbjct: 6   LHAFDTVSPVPYSIDISPETYENINDNMNTEENDHLVDDCNSKESEMKNRKTNSE 60


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