BLASTX nr result

ID: Ophiopogon27_contig00050550 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00050550
         (685 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY58214.1| hypothetical protein RhiirA4_479940 [Rhizophagus ...    37   9e-06

>gb|PKY58214.1| hypothetical protein RhiirA4_479940 [Rhizophagus irregularis]
          Length = 111

 Score = 37.0 bits (84), Expect(3) = 9e-06
 Identities = 15/16 (93%), Positives = 16/16 (100%)
 Frame = -3

Query: 326 NATHQADLAEMPIDPK 279
           NATHQADLAEMP+DPK
Sbjct: 50  NATHQADLAEMPVDPK 65



 Score = 33.5 bits (75), Expect(3) = 9e-06
 Identities = 16/28 (57%), Positives = 22/28 (78%), Gaps = 4/28 (14%)
 Frame = -2

Query: 285 PQGFHYFLVMV----EQVDEEPLKNKTS 214
           P+GFHYFLV+V    ++VD EP K+KT+
Sbjct: 64  PKGFHYFLVVVKIAGKKVDVEPPKDKTA 91



 Score = 26.9 bits (58), Expect(3) = 9e-06
 Identities = 11/19 (57%), Positives = 16/19 (84%)
 Frame = -2

Query: 93  VKEPQNKTAEKVLNGFDRI 37
           V+ P++KTA +VLNGF +I
Sbjct: 83  VEPPKDKTANRVLNGFVKI 101


Top