BLASTX nr result

ID: Ophiopogon27_contig00050276 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00050276
         (524 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX74882.1| hypothetical protein RirG_046940 [Rhizophagus irr...   108   1e-27
dbj|GBC45866.1| hypothetical protein RIR_2836000 [Rhizophagus ir...    97   6e-23

>gb|EXX74882.1| hypothetical protein RirG_046940 [Rhizophagus irregularis DAOM
           197198w]
 gb|POG77744.1| hypothetical protein GLOIN_2v1767322 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 107

 Score =  108 bits (271), Expect = 1e-27
 Identities = 73/115 (63%), Positives = 83/115 (72%), Gaps = 7/115 (6%)
 Frame = -1

Query: 491 MAFHSRNFFISAIIVMITFSFLIDKFQDTKSN----LFLLETSPQSQQDIFAIELYE-IF 327
           MAFH RNF I  II++I   FLIDKFQDT +N    LFLLETS QSQ+D+F  E++E  F
Sbjct: 1   MAFH-RNFLI--IIMIIMLGFLIDKFQDTTTNNLNNLFLLETS-QSQEDLF--EIFERYF 54

Query: 326 KQEQE-PSMELVSARAYPPASVILPDVFYEIFSDEFVDQYWQQFAAT-HEQTPLI 168
           KQEQE PS EL     YP   VIL DV YE+FSDEF+DQYWQ+FAA  HE TPLI
Sbjct: 55  KQEQEQPSTELAVRPNYP---VILSDVLYEMFSDEFLDQYWQKFAAAHHEPTPLI 106


>dbj|GBC45866.1| hypothetical protein RIR_2836000 [Rhizophagus irregularis DAOM
           181602]
          Length = 93

 Score = 96.7 bits (239), Expect = 6e-23
 Identities = 62/95 (65%), Positives = 70/95 (73%), Gaps = 7/95 (7%)
 Frame = -1

Query: 431 FLIDKFQDTKSN----LFLLETSPQSQQDIFAIELYE-IFKQEQE-PSMELVSARAYPPA 270
           FLIDKFQDT +N    LFLLETS QSQ+D+F  E++E  FKQEQE PS EL     YP  
Sbjct: 4   FLIDKFQDTTTNNLNNLFLLETS-QSQEDLF--EIFERYFKQEQEQPSTELAVRPNYP-- 58

Query: 269 SVILPDVFYEIFSDEFVDQYWQQFAAT-HEQTPLI 168
            VIL DV YE+FSDEF+DQYWQ+FAA  HE TPLI
Sbjct: 59  -VILSDVLYEMFSDEFLDQYWQKFAAAHHEPTPLI 92


Top