BLASTX nr result
ID: Ophiopogon27_contig00050115
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00050115
(382 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|GBC11943.1| Replication factor A2 [Rhizophagus irregularis D... 156 6e-45
dbj|GAP86369.1| putative replication factor A2 [Rosellinia necat... 60 4e-08
emb|CDP10584.1| unnamed protein product [Coffea canephora] 59 8e-08
gb|ORX70231.1| nucleic acid-binding protein [Linderina pennispora] 59 1e-07
ref|XP_011069920.1| replication protein A 32 kDa subunit A isofo... 58 3e-07
ref|XP_011069919.1| replication protein A 32 kDa subunit A isofo... 58 3e-07
ref|XP_012837580.1| PREDICTED: replication protein A 32 kDa subu... 58 3e-07
gb|EYU37327.1| hypothetical protein MIMGU_mgv1a009917mg [Erythra... 58 3e-07
dbj|GAW10714.1| hypothetical protein ANO14919_000490 [fungal sp.... 57 4e-07
ref|XP_018740450.1| uncharacterized protein MSY001_1893 [Malasse... 56 4e-07
ref|XP_016475019.1| PREDICTED: replication protein A 32 kDa subu... 57 6e-07
ref|XP_016475015.1| PREDICTED: replication protein A 32 kDa subu... 57 6e-07
ref|XP_016475008.1| PREDICTED: replication protein A 32 kDa subu... 57 7e-07
ref|XP_016475001.1| PREDICTED: replication protein A 32 kDa subu... 57 7e-07
gb|PIN06588.1| Single-stranded DNA-binding replication protein A... 57 8e-07
ref|XP_016515849.1| PREDICTED: replication protein A 32 kDa subu... 55 9e-07
emb|CCX04445.1| Similar to Replication factor A protein 2; acc. ... 56 1e-06
ref|XP_009589406.1| PREDICTED: replication protein A 32 kDa subu... 56 1e-06
ref|XP_009589405.1| PREDICTED: replication protein A 32 kDa subu... 56 1e-06
emb|SHO78437.1| Similar to S.cerevisiae protein RFA2 (Subunit of... 55 2e-06
>dbj|GBC11943.1| Replication factor A2 [Rhizophagus irregularis DAOM 181602]
gb|PKC10237.1| replication protein A, subunit RPA32 [Rhizophagus irregularis]
gb|PKC66030.1| replication protein A, subunit RPA32 [Rhizophagus irregularis]
gb|PKK74592.1| replication protein A, subunit RPA32 [Rhizophagus irregularis]
gb|PKY21724.1| replication protein A, subunit RPA32 [Rhizophagus irregularis]
gb|PKY46284.1| replication protein A, subunit RPA32 [Rhizophagus irregularis]
gb|POG72407.1| hypothetical protein GLOIN_2v1477780 [Rhizophagus irregularis DAOM
181602=DAOM 197198]
Length = 283
Score = 156 bits (395), Expect = 6e-45
Identities = 80/102 (78%), Positives = 82/102 (80%)
Frame = +3
Query: 75 GGAYSAGEYSNVTXXXXXXXXXXXXXXXXXXXXNERRNNNNLRPVTIKQLHEATPVNDNS 254
GGAYSAGEYSNVT NERRNN+NLRPVTIKQLHEATPVNDNS
Sbjct: 19 GGAYSAGEYSNVTSGGGFIKSEEGSSFSKGSQGNERRNNHNLRPVTIKQLHEATPVNDNS 78
Query: 255 TLMDGLELRVVKIVGVVKEKTPRHQGIDYVVDDGTGFIDVKV 380
TL+DGLELRVVKIVGVVKEKTPRHQGIDYVVDDGTGFIDVKV
Sbjct: 79 TLIDGLELRVVKIVGVVKEKTPRHQGIDYVVDDGTGFIDVKV 120
>dbj|GAP86369.1| putative replication factor A2 [Rosellinia necatrix]
Length = 279
Score = 60.1 bits (144), Expect = 4e-08
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 2/66 (3%)
Frame = +3
Query: 186 NNNNLRPVTIKQLHEATPV--NDNSTLMDGLELRVVKIVGVVKEKTPRHQGIDYVVDDGT 359
N+ +LRPVTIKQ+ +A P D S +DGL+++ V +VG+V+ P+ I Y +DDGT
Sbjct: 36 NDESLRPVTIKQIIDAEPAYAGDASFRIDGLDVKQVTVVGMVRAINPQTTNITYKLDDGT 95
Query: 360 GFIDVK 377
G ++VK
Sbjct: 96 GVVEVK 101
>emb|CDP10584.1| unnamed protein product [Coffea canephora]
Length = 281
Score = 59.3 bits (142), Expect = 8e-08
Identities = 31/67 (46%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Frame = +3
Query: 177 ERRNNNNLRPVTIKQLHEATPVNDN--STLMDGLELRVVKIVGVVKEKTPRHQGIDYVVD 350
+ R+ L P+T+KQ+ EA +D+ + L+DG+E+ VK+VG++K KT R I +VVD
Sbjct: 37 KNRDTQTLIPLTVKQISEAFHSSDDKMNLLVDGVEVNNVKMVGLLKNKTERVTDIQFVVD 96
Query: 351 DGTGFID 371
DGTG ID
Sbjct: 97 DGTGCID 103
>gb|ORX70231.1| nucleic acid-binding protein [Linderina pennispora]
Length = 321
Score = 59.3 bits (142), Expect = 1e-07
Identities = 31/65 (47%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +3
Query: 189 NNNLRPVTIKQLHEATPVN-DNSTLMDGLELRVVKIVGVVKEKTPRHQGIDYVVDDGTGF 365
N +LRPVTIKQL + VN D ++DG E++ V VGV++ TP+ I Y ++DGTG
Sbjct: 63 NQSLRPVTIKQLLDIPVVNTDMPIVLDGEEIKQVTFVGVIRTITPQAINITYGIEDGTGL 122
Query: 366 IDVKV 380
ID++V
Sbjct: 123 IDLRV 127
>ref|XP_011069920.1| replication protein A 32 kDa subunit A isoform X2 [Sesamum indicum]
Length = 266
Score = 57.8 bits (138), Expect = 3e-07
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Frame = +3
Query: 183 RNNNNLRPVTIKQLHEATPVNDNST--LMDGLELRVVKIVGVVKEKTPRHQGIDYVVDDG 356
R+N + PVT+KQ+ EATP D+ L+DG+++ VK++G+V +K+ R + +V+DDG
Sbjct: 32 RDNQPMYPVTVKQIIEATPSTDDKPNFLIDGVDVYNVKLIGMVFDKSERLTDVSFVIDDG 91
Query: 357 TGFI 368
TG I
Sbjct: 92 TGRI 95
>ref|XP_011069919.1| replication protein A 32 kDa subunit A isoform X1 [Sesamum indicum]
Length = 268
Score = 57.8 bits (138), Expect = 3e-07
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Frame = +3
Query: 183 RNNNNLRPVTIKQLHEATPVNDNST--LMDGLELRVVKIVGVVKEKTPRHQGIDYVVDDG 356
R+N + PVT+KQ+ EATP D+ L+DG+++ VK++G+V +K+ R + +V+DDG
Sbjct: 32 RDNQPMYPVTVKQIIEATPSTDDKPNFLIDGVDVYNVKLIGMVFDKSERLTDVSFVIDDG 91
Query: 357 TGFI 368
TG I
Sbjct: 92 TGRI 95
>ref|XP_012837580.1| PREDICTED: replication protein A 32 kDa subunit A-like [Erythranthe
guttata]
Length = 269
Score = 57.8 bits (138), Expect = 3e-07
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = +3
Query: 183 RNNNNLRPVTIKQLHEATPVNDNST-LMDGLELRVVKIVGVVKEKTPRHQGIDYVVDDGT 359
R+N + PVT+KQ+ EA+ +D S L+DG+++ VK+VG+V EK+ R+ +V+DDGT
Sbjct: 34 RDNQPMCPVTVKQIVEASSADDKSNFLIDGIDVYNVKLVGMVFEKSARNTDASFVIDDGT 93
Query: 360 GFI 368
G I
Sbjct: 94 GRI 96
>gb|EYU37327.1| hypothetical protein MIMGU_mgv1a009917mg [Erythranthe guttata]
Length = 327
Score = 57.8 bits (138), Expect = 3e-07
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = +3
Query: 183 RNNNNLRPVTIKQLHEATPVNDNST-LMDGLELRVVKIVGVVKEKTPRHQGIDYVVDDGT 359
R+N + PVT+KQ+ EA+ +D S L+DG+++ VK+VG+V EK+ R+ +V+DDGT
Sbjct: 92 RDNQPMCPVTVKQIVEASSADDKSNFLIDGIDVYNVKLVGMVFEKSARNTDASFVIDDGT 151
Query: 360 GFI 368
G I
Sbjct: 152 GRI 154
>dbj|GAW10714.1| hypothetical protein ANO14919_000490 [fungal sp. No.14919]
Length = 275
Score = 57.4 bits (137), Expect = 4e-07
Identities = 30/66 (45%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Frame = +3
Query: 186 NNNNLRPVTIKQLHEATP--VNDNSTLMDGLELRVVKIVGVVKEKTPRHQGIDYVVDDGT 359
+ +LRPVTIKQ+ +A P D S +DG +++ V IVG+V+ +P+ I Y +DDGT
Sbjct: 43 SEESLRPVTIKQIIDAEPSYAGDASFKIDGSDVKQVTIVGMVRTISPQTTNITYKIDDGT 102
Query: 360 GFIDVK 377
G I+VK
Sbjct: 103 GVIEVK 108
>ref|XP_018740450.1| uncharacterized protein MSY001_1893 [Malassezia sympodialis ATCC
42132]
emb|CCU99187.1| unnamed protein product [Malassezia sympodialis ATCC 42132]
Length = 182
Score = 56.2 bits (134), Expect = 4e-07
Identities = 30/68 (44%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 177 ERRNNNNLRPVTIKQ-LHEATPVNDNSTLMDGLELRVVKIVGVVKEKTPRHQGIDYVVDD 353
+R +LRPVT++Q LH + P +D DG EL V IV V+ T I Y +DD
Sbjct: 39 QRMGTQSLRPVTVRQVLHASQPHSDAPFTFDGAELSQVSIVAWVRSATKNATNIQYTIDD 98
Query: 354 GTGFIDVK 377
GTG IDV+
Sbjct: 99 GTGQIDVR 106
>ref|XP_016475019.1| PREDICTED: replication protein A 32 kDa subunit B-like isoform X4
[Nicotiana tabacum]
Length = 253
Score = 56.6 bits (135), Expect = 6e-07
Identities = 27/68 (39%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Frame = +3
Query: 174 NERRNNNNLRPVTIKQLHEATPVNDNST--LMDGLELRVVKIVGVVKEKTPRHQGIDYVV 347
++ R++ +L P+++KQ+ EA +D+ T L+DG+++ VK+VG++ K+ R + +VV
Sbjct: 9 SQNRDSQSLLPLSVKQISEAFQSSDDKTNFLIDGVDVNNVKVVGILFNKSERVTEVSFVV 68
Query: 348 DDGTGFID 371
DDGTG ID
Sbjct: 69 DDGTGRID 76
>ref|XP_016475015.1| PREDICTED: replication protein A 32 kDa subunit A-like isoform X3
[Nicotiana tabacum]
Length = 253
Score = 56.6 bits (135), Expect = 6e-07
Identities = 27/68 (39%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Frame = +3
Query: 174 NERRNNNNLRPVTIKQLHEATPVNDNST--LMDGLELRVVKIVGVVKEKTPRHQGIDYVV 347
++ R++ +L P+++KQ+ EA +D+ T L+DG+++ VK+VG++ K+ R + +VV
Sbjct: 9 SQNRDSQSLLPLSVKQISEAFQSSDDKTNFLIDGVDVNNVKVVGILFNKSERVTEVSFVV 68
Query: 348 DDGTGFID 371
DDGTG ID
Sbjct: 69 DDGTGRID 76
>ref|XP_016475008.1| PREDICTED: replication protein A 32 kDa subunit A-like isoform X2
[Nicotiana tabacum]
Length = 255
Score = 56.6 bits (135), Expect = 7e-07
Identities = 27/68 (39%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Frame = +3
Query: 174 NERRNNNNLRPVTIKQLHEATPVNDNST--LMDGLELRVVKIVGVVKEKTPRHQGIDYVV 347
++ R++ +L P+++KQ+ EA +D+ T L+DG+++ VK+VG++ K+ R + +VV
Sbjct: 9 SQNRDSQSLLPLSVKQISEAFQSSDDKTNFLIDGVDVNNVKVVGILFNKSERVTEVSFVV 68
Query: 348 DDGTGFID 371
DDGTG ID
Sbjct: 69 DDGTGRID 76
>ref|XP_016475001.1| PREDICTED: replication protein A 32 kDa subunit A-like isoform X1
[Nicotiana tabacum]
Length = 255
Score = 56.6 bits (135), Expect = 7e-07
Identities = 27/68 (39%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Frame = +3
Query: 174 NERRNNNNLRPVTIKQLHEATPVNDNST--LMDGLELRVVKIVGVVKEKTPRHQGIDYVV 347
++ R++ +L P+++KQ+ EA +D+ T L+DG+++ VK+VG++ K+ R + +VV
Sbjct: 9 SQNRDSQSLLPLSVKQISEAFQSSDDKTNFLIDGVDVNNVKVVGILFNKSERVTEVSFVV 68
Query: 348 DDGTGFID 371
DDGTG ID
Sbjct: 69 DDGTGRID 76
>gb|PIN06588.1| Single-stranded DNA-binding replication protein A (RPA), medium (30
kD) subunit [Handroanthus impetiginosus]
Length = 279
Score = 56.6 bits (135), Expect = 8e-07
Identities = 28/67 (41%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Frame = +3
Query: 177 ERRNNNNLRPVTIKQLHEATPVNDNST--LMDGLELRVVKIVGVVKEKTPRHQGIDYVVD 350
+ R+ L P+T+KQ+ EA +D+ L+DG+++ VK+VG++ EKT R + +V+D
Sbjct: 35 KNRDTQALLPLTVKQISEAFQASDDKANFLIDGVDVNNVKLVGMLYEKTERVTDVSFVLD 94
Query: 351 DGTGFID 371
DGTG ID
Sbjct: 95 DGTGRID 101
>ref|XP_016515849.1| PREDICTED: replication protein A 32 kDa subunit A-like [Nicotiana
tabacum]
Length = 165
Score = 55.1 bits (131), Expect = 9e-07
Identities = 27/67 (40%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Frame = +3
Query: 177 ERRNNNNLRPVTIKQLHEATPVNDNST--LMDGLELRVVKIVGVVKEKTPRHQGIDYVVD 350
+ R++ L P+++KQ+ EA +D+ T L+DG+++ VK+VG++ K R + +VVD
Sbjct: 37 KNRDSQTLLPLSVKQISEAFQSSDDKTNFLIDGVDVNNVKVVGILFNKAERVTEVSFVVD 96
Query: 351 DGTGFID 371
DGTG ID
Sbjct: 97 DGTGRID 103
>emb|CCX04445.1| Similar to Replication factor A protein 2; acc. no. Q92373
[Pyronema omphalodes CBS 100304]
Length = 270
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/66 (46%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +3
Query: 183 RNNNNLRPVTIKQLHEATP-VNDNSTLMDGLELRVVKIVGVVKEKTPRHQGIDYVVDDGT 359
R++ LRPVTIKQ+ EA V D ++D +EL ++ VG V+ T + I YV+DDGT
Sbjct: 39 RSSETLRPVTIKQILEARQEVGDGPFMIDSVELGLLTFVGRVQGVTEQATNITYVLDDGT 98
Query: 360 GFIDVK 377
G +DVK
Sbjct: 99 GTLDVK 104
>ref|XP_009589406.1| PREDICTED: replication protein A 32 kDa subunit B-like isoform X2
[Nicotiana tomentosiformis]
Length = 280
Score = 55.8 bits (133), Expect = 1e-06
Identities = 27/67 (40%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Frame = +3
Query: 177 ERRNNNNLRPVTIKQLHEATPVNDNST--LMDGLELRVVKIVGVVKEKTPRHQGIDYVVD 350
+ R++ +L P+++KQ+ EA +D+ T L+DG+++ VK+VG++ K+ R + +VVD
Sbjct: 37 KNRDSQSLLPLSVKQISEAFQSSDDKTNFLIDGVDVNNVKVVGILFNKSERVTEVSFVVD 96
Query: 351 DGTGFID 371
DGTG ID
Sbjct: 97 DGTGRID 103
>ref|XP_009589405.1| PREDICTED: replication protein A 32 kDa subunit B-like isoform X1
[Nicotiana tomentosiformis]
Length = 282
Score = 55.8 bits (133), Expect = 1e-06
Identities = 27/67 (40%), Positives = 47/67 (70%), Gaps = 2/67 (2%)
Frame = +3
Query: 177 ERRNNNNLRPVTIKQLHEATPVNDNST--LMDGLELRVVKIVGVVKEKTPRHQGIDYVVD 350
+ R++ +L P+++KQ+ EA +D+ T L+DG+++ VK+VG++ K+ R + +VVD
Sbjct: 37 KNRDSQSLLPLSVKQISEAFQSSDDKTNFLIDGVDVNNVKVVGILFNKSERVTEVSFVVD 96
Query: 351 DGTGFID 371
DGTG ID
Sbjct: 97 DGTGRID 103
>emb|SHO78437.1| Similar to S.cerevisiae protein RFA2 (Subunit of heterotrimeric
Replication Protein A (RPA)) [Malassezia sympodialis
ATCC 42132]
Length = 268
Score = 55.5 bits (132), Expect = 2e-06
Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Frame = +3
Query: 180 RRNNNNLRPVTIKQ-LHEATPVNDNSTLMDGLELRVVKIVGVVKEKTPRHQGIDYVVDDG 356
R +LRPVT++Q LH + P +D DG EL V IV V+ T I Y +DDG
Sbjct: 32 RMGTQSLRPVTVRQVLHASQPHSDAPFTFDGAELSQVSIVAWVRSATKNATNIQYTIDDG 91
Query: 357 TGFIDVK 377
TG IDV+
Sbjct: 92 TGQIDVR 98