BLASTX nr result

ID: Ophiopogon27_contig00049853 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00049853
         (373 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX55013.1| hypothetical protein RirG_229130 [Rhizophagus irr...   162   1e-43
dbj|GBC51120.1| fg-nucleoporin nup159 [Rhizophagus irregularis D...   162   1e-43

>gb|EXX55013.1| hypothetical protein RirG_229130 [Rhizophagus irregularis DAOM
            197198w]
          Length = 1402

 Score =  162 bits (409), Expect = 1e-43
 Identities = 81/119 (68%), Positives = 100/119 (84%)
 Frame = -2

Query: 369  KQLDMLHEQIKDHKANRFAGQPPLEYIDRSIRNISKGLYSNASQIEELNTQLDLITEQLA 190
            KQLDML+EQIKDHKANRFAGQPPLEYIDRSI+NISKGLYSNASQIE+LNTQLD ITE+L+
Sbjct: 733  KQLDMLYEQIKDHKANRFAGQPPLEYIDRSIQNISKGLYSNASQIEQLNTQLDSITERLS 792

Query: 189  SVSFNENADDFVSQQIEYETRKSIIPVKCSDEAEEKN*SVNEERMEIIQTFKYKQKQEK 13
            S++FNE+++DFVSQQIE+ETRKS IPV  S EAEEK   + ++  ++ +     + + K
Sbjct: 793  SMNFNEHSNDFVSQQIEHETRKSTIPVNFSAEAEEKTNQIIKKEWKLFKFSNINKSKRK 851


>dbj|GBC51120.1| fg-nucleoporin nup159 [Rhizophagus irregularis DAOM 181602]
          Length = 1422

 Score =  162 bits (409), Expect = 1e-43
 Identities = 81/119 (68%), Positives = 100/119 (84%)
 Frame = -2

Query: 369  KQLDMLHEQIKDHKANRFAGQPPLEYIDRSIRNISKGLYSNASQIEELNTQLDLITEQLA 190
            KQLDML+EQIKDHKANRFAGQPPLEYIDRSI+NISKGLYSNASQIE+LNTQLD ITE+L+
Sbjct: 733  KQLDMLYEQIKDHKANRFAGQPPLEYIDRSIQNISKGLYSNASQIEQLNTQLDSITERLS 792

Query: 189  SVSFNENADDFVSQQIEYETRKSIIPVKCSDEAEEKN*SVNEERMEIIQTFKYKQKQEK 13
            S++FNE+++DFVSQQIE+ETRKS IPV  S EAEEK   + ++  ++ +     + + K
Sbjct: 793  SMNFNEHSNDFVSQQIEHETRKSTIPVNFSAEAEEKTNQIIKKEWKLFKFSNINKSKRK 851


Top