BLASTX nr result

ID: Ophiopogon27_contig00049542 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00049542
         (669 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKC70149.1| hypothetical protein RhiirA1_455158, partial [Rhi...   183   2e-50
dbj|GBC17338.1| serine/arginine-rich splicing factor 6 [Rhizopha...   183   2e-49
gb|EXX70485.1| hypothetical protein RirG_087010 [Rhizophagus irr...   183   2e-49

>gb|PKC70149.1| hypothetical protein RhiirA1_455158, partial [Rhizophagus
            irregularis]
          Length = 660

 Score =  183 bits (464), Expect = 2e-50
 Identities = 130/297 (43%), Positives = 168/297 (56%), Gaps = 86/297 (28%)
 Frame = -3

Query: 667  NMTRAENPERFIEKAVESDSEKYSP-IGENSFELNLRNENSNKVSGKLKSMSQWENLRKY 491
            N+ RA+ PERF EK ++SD + YS   GENS ELN   E++NKVS + +S++QWENLRK+
Sbjct: 333  NLLRAKYPERF-EKTIKSDDKLYSEKSGENSTELN---ESNNKVSERRRSINQWENLRKH 388

Query: 490  VRTS----KSDDNLLGLIS--GLKKKES--------NATNGS---------TLLNFNEK- 383
            VR S    K ++N L LI+  GLKKKES        N T+ S         +LL++NEK 
Sbjct: 389  VRNSTLYGKIENNSLRLITNPGLKKKESDNGIKDSLNNTSASSGDQKFKEGSLLDYNEKI 448

Query: 382  --NQQSFKQQSEFVKGSLLGS---------------------------NNFHLVQIENGI 290
               +Q   +   FVKGSLL S                           N+   V +   +
Sbjct: 449  PSPKQVEPESKAFVKGSLLASNDALFEQATEREKLRKAIGGVGIIRDQNSLTFVNLNTSV 508

Query: 289  QFNKGSLLTK----SNEKNNN----------------------------TQRSYKNSSGT 206
            +F++GSLL K    +NE NNN                            TQRS+KN SGT
Sbjct: 509  KFSQGSLLDKNNDTTNENNNNSNNSPTGRLVQIENGVQFNKGSLLTKSKTQRSHKNPSGT 568

Query: 205  LLRIDATLSRSASAQNLTTPNGKTLLELDLKPDAAHTLALRNTKIKPLLSFVPGESN 35
            LL+IDA LS+SA  Q++ +PNGKTLLE+DLKPDAAHT+ALRNT +KPLLSFVPGE+N
Sbjct: 569  LLKIDAPLSKSAPVQSILSPNGKTLLEIDLKPDAAHTIALRNTNVKPLLSFVPGENN 625


>dbj|GBC17338.1| serine/arginine-rich splicing factor 6 [Rhizophagus irregularis DAOM
            181602]
          Length = 1317

 Score =  183 bits (464), Expect = 2e-49
 Identities = 130/297 (43%), Positives = 168/297 (56%), Gaps = 86/297 (28%)
 Frame = -3

Query: 667  NMTRAENPERFIEKAVESDSEKYSP-IGENSFELNLRNENSNKVSGKLKSMSQWENLRKY 491
            N+ RA+ PERF EK ++SD + YS   GENS ELN   E++NKVS + +S++QWENLRK+
Sbjct: 990  NLLRAKYPERF-EKTIKSDDKLYSEKSGENSTELN---ESNNKVSERRRSINQWENLRKH 1045

Query: 490  VRTS----KSDDNLLGLIS--GLKKKES--------NATNGS---------TLLNFNEK- 383
            VR S    K ++N L LI+  GLKKKES        N T+ S         +LL++NEK 
Sbjct: 1046 VRNSTLYGKIENNSLRLITNPGLKKKESDNGIKDSLNNTSASSGDQKFKEGSLLDYNEKI 1105

Query: 382  --NQQSFKQQSEFVKGSLLGS---------------------------NNFHLVQIENGI 290
               +Q   +   FVKGSLL S                           N+   V +   +
Sbjct: 1106 PSPKQVEPESKAFVKGSLLASNDALFEQAKEREKLRKAIGGVGIIRDQNSLTFVNLNTSV 1165

Query: 289  QFNKGSLLTK----SNEKNNN----------------------------TQRSYKNSSGT 206
            +F++GSLL K    +NE NNN                            TQRS+KN SGT
Sbjct: 1166 KFSQGSLLDKNNDTTNENNNNSNNSPTGRLVQIENGVQFNKGSLLTKSKTQRSHKNPSGT 1225

Query: 205  LLRIDATLSRSASAQNLTTPNGKTLLELDLKPDAAHTLALRNTKIKPLLSFVPGESN 35
            LL+IDA LS+SA  Q++ +PNGKTLLE+DLKPDAAHT+ALRNT +KPLLSFVPGE+N
Sbjct: 1226 LLKIDAPLSKSAPVQSILSPNGKTLLEIDLKPDAAHTIALRNTNVKPLLSFVPGENN 1282


>gb|EXX70485.1| hypothetical protein RirG_087010 [Rhizophagus irregularis DAOM
            197198w]
          Length = 1382

 Score =  183 bits (464), Expect = 2e-49
 Identities = 130/297 (43%), Positives = 168/297 (56%), Gaps = 86/297 (28%)
 Frame = -3

Query: 667  NMTRAENPERFIEKAVESDSEKYSP-IGENSFELNLRNENSNKVSGKLKSMSQWENLRKY 491
            N+ RA+ PERF EK ++SD + YS   GENS ELN   E++NKVS + +S++QWENLRK+
Sbjct: 1055 NLLRAKYPERF-EKTIKSDDKLYSEKSGENSTELN---ESNNKVSERRRSINQWENLRKH 1110

Query: 490  VRTS----KSDDNLLGLIS--GLKKKES--------NATNGS---------TLLNFNEK- 383
            VR S    K ++N L LI+  GLKKKES        N T+ S         +LL++NEK 
Sbjct: 1111 VRNSTLYGKIENNSLRLITNPGLKKKESDNGIKDSLNNTSASSGDQKFKEGSLLDYNEKI 1170

Query: 382  --NQQSFKQQSEFVKGSLLGS---------------------------NNFHLVQIENGI 290
               +Q   +   FVKGSLL S                           N+   V +   +
Sbjct: 1171 PSPKQVEPESKAFVKGSLLASNDALFEQAKEREKLRKAIGGVGIIRDQNSLTFVNLNTSV 1230

Query: 289  QFNKGSLLTK----SNEKNNN----------------------------TQRSYKNSSGT 206
            +F++GSLL K    +NE NNN                            TQRS+KN SGT
Sbjct: 1231 KFSQGSLLDKNNDTTNENNNNSNNSPTGRLVQIENGVQFNKGSLLTKSKTQRSHKNPSGT 1290

Query: 205  LLRIDATLSRSASAQNLTTPNGKTLLELDLKPDAAHTLALRNTKIKPLLSFVPGESN 35
            LL+IDA LS+SA  Q++ +PNGKTLLE+DLKPDAAHT+ALRNT +KPLLSFVPGE+N
Sbjct: 1291 LLKIDAPLSKSAPVQSILSPNGKTLLEIDLKPDAAHTIALRNTNVKPLLSFVPGENN 1347


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