BLASTX nr result

ID: Ophiopogon27_contig00048553 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00048553
         (440 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKC74187.1| hypothetical protein RhiirA1_214443 [Rhizophagus ...    52   4e-06
gb|EXX76781.1| hypothetical protein RirG_029860 [Rhizophagus irr...    52   5e-06

>gb|PKC74187.1| hypothetical protein RhiirA1_214443 [Rhizophagus irregularis]
          Length = 90

 Score = 52.4 bits (124), Expect = 4e-06
 Identities = 36/83 (43%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
 Frame = -2

Query: 433 VFIFAHQATRKLGISSDTLHRWLEQGKITAKC--XXXXXXXXXXXTSQIADNNNATT--- 269
           +++ AHQAT+KL ISSDTL RWL+QGKITAK                ++   N  TT   
Sbjct: 1   MYLSAHQATKKLDISSDTLRRWLKQGKITAKTSPSGTRLYNISYIFPELTSQNVETTPPP 60

Query: 268 ----KKGSSMLGSSVKSVKQKEN 212
               KK SS L S V S K+  N
Sbjct: 61  PPPPKKVSSTLESLVPSKKKTLN 83


>gb|EXX76781.1| hypothetical protein RirG_029860 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC31680.1| JEMT01011831.1_cds_EXX76781.1_3242 [Rhizophagus irregularis DAOM
           181602]
          Length = 73

 Score = 51.6 bits (122), Expect = 5e-06
 Identities = 23/31 (74%), Positives = 28/31 (90%)
 Frame = -2

Query: 433 VFIFAHQATRKLGISSDTLHRWLEQGKITAK 341
           +++ AHQAT+KL ISSDTL RWL+QGKITAK
Sbjct: 1   MYLSAHQATKKLDISSDTLRRWLKQGKITAK 31


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