BLASTX nr result

ID: Ophiopogon27_contig00048457 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00048457
         (681 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKC18064.1| hypothetical protein RhiirA5_345445 [Rhizophagus ...   158   1e-45
gb|EXX69317.1| CCR4-NOT core ubiquitin-protein ligase subunit MO...   161   7e-42
dbj|GBC37745.1| CCR4-NOT transcription complex subunit 4 [Rhizop...   137   2e-33

>gb|PKC18064.1| hypothetical protein RhiirA5_345445 [Rhizophagus irregularis]
          Length = 166

 Score =  158 bits (400), Expect = 1e-45
 Identities = 97/176 (55%), Positives = 103/176 (58%), Gaps = 13/176 (7%)
 Frame = +3

Query: 18  IPEDFKFAFLSS-------------KKDQNDESGSNLSAFENSSLDLKTLTSPTFDFSSA 158
           +P DFKF F SS             K  QNDESG NLSAFE+SSLD K+ TS TF     
Sbjct: 1   MPADFKFDFESSPLFISLPPSISGPKNYQNDESGPNLSAFESSSLDFKSPTSTTF----- 55

Query: 159 DLFSKDFNFNTSPIFNLQTXXXXXXXXXXXXXXXXXXXXXILMNGNTNLWTDPNPSNADT 338
           DLFSKDFN NTS IFNLQT                      L NGN NLWTDPNPSN+DT
Sbjct: 56  DLFSKDFNINTSSIFNLQT----SFSSAFGSSNNNPPGSPTLNNGNANLWTDPNPSNSDT 111

Query: 339 MINNYSNGSSGVRTTTASVEDLERQXXXXXXXXXXXXXXXXXXIKKNTHHLQDAWK 506
           MIN  SNGS+GV+TTTASVEDLERQ                  IKKNTHHLQDAWK
Sbjct: 112 MIN--SNGSNGVKTTTASVEDLERQVANARREAEVLELRLRAVIKKNTHHLQDAWK 165


>gb|EXX69317.1| CCR4-NOT core ubiquitin-protein ligase subunit MOT2 [Rhizophagus
            irregularis DAOM 197198w]
          Length = 1335

 Score =  161 bits (408), Expect = 7e-42
 Identities = 101/182 (55%), Positives = 107/182 (58%), Gaps = 14/182 (7%)
 Frame = +3

Query: 3    EIKN-KIPEDFKFAFLSS-------------KKDQNDESGSNLSAFENSSLDLKTLTSPT 140
            EI N K+P DFKF F SS             K  QNDESG NLSAFE+SSLD K+ TS T
Sbjct: 1164 EINNSKMPADFKFDFESSPLFISLPPSISGPKNYQNDESGPNLSAFESSSLDFKSPTSTT 1223

Query: 141  FDFSSADLFSKDFNFNTSPIFNLQTXXXXXXXXXXXXXXXXXXXXXILMNGNTNLWTDPN 320
            F     DLFSKDFN NTS IFNLQT                      L NGN NLWTDPN
Sbjct: 1224 F-----DLFSKDFNINTSSIFNLQT----SFSSAFGSSNNNPPGSPTLNNGNANLWTDPN 1274

Query: 321  PSNADTMINNYSNGSSGVRTTTASVEDLERQXXXXXXXXXXXXXXXXXXIKKNTHHLQDA 500
            PSN+DTMIN  SNGS+GV+TTTASVEDLERQ                  IKKNTHHLQDA
Sbjct: 1275 PSNSDTMIN--SNGSNGVKTTTASVEDLERQVANARREAEVLELRLRAVIKKNTHHLQDA 1332

Query: 501  WK 506
            WK
Sbjct: 1333 WK 1334


>dbj|GBC37745.1| CCR4-NOT transcription complex subunit 4 [Rhizophagus irregularis
            DAOM 181602]
          Length = 1270

 Score =  137 bits (345), Expect = 2e-33
 Identities = 87/150 (58%), Positives = 93/150 (62%), Gaps = 14/150 (9%)
 Frame = +3

Query: 3    EIKN-KIPEDFKFAFLSS-------------KKDQNDESGSNLSAFENSSLDLKTLTSPT 140
            EI N K+P DFKF F SS             K  QNDESG NLSAFE+SSLD K+ TS T
Sbjct: 1101 EINNSKMPADFKFDFESSPLFISLPPSISGPKNYQNDESGPNLSAFESSSLDFKSPTSTT 1160

Query: 141  FDFSSADLFSKDFNFNTSPIFNLQTXXXXXXXXXXXXXXXXXXXXXILMNGNTNLWTDPN 320
            F     DLFSKDFN NTS IFNLQT                      L NGN NLWTDPN
Sbjct: 1161 F-----DLFSKDFNINTSSIFNLQT----SFSSAFGSSNNNPPGSPTLNNGNANLWTDPN 1211

Query: 321  PSNADTMINNYSNGSSGVRTTTASVEDLER 410
            PSN+DTMIN  SNGS+GV+TTTASVEDLER
Sbjct: 1212 PSNSDTMIN--SNGSNGVKTTTASVEDLER 1239


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