BLASTX nr result

ID: Ophiopogon27_contig00047906 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00047906
         (717 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX74530.1| hypothetical protein RirG_050280 [Rhizophagus irr...   143   1e-37

>gb|EXX74530.1| hypothetical protein RirG_050280 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC52123.1| hypothetical protein RIR_3353300 [Rhizophagus irregularis DAOM
           181602]
 gb|PKC14145.1| hypothetical protein RhiirA5_409753 [Rhizophagus irregularis]
 gb|PKC73135.1| hypothetical protein RhiirA1_451512 [Rhizophagus irregularis]
 gb|PKY15236.1| hypothetical protein RhiirB3_427401 [Rhizophagus irregularis]
 gb|POG59512.1| hypothetical protein GLOIN_2v1789038 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 324

 Score =  143 bits (361), Expect = 1e-37
 Identities = 68/109 (62%), Positives = 88/109 (80%)
 Frame = +3

Query: 198 QSQLKEQTTSQPSVLKTSEGGSNSFNSKTPEQQLEIMKYWLDEYYKHNRFDPTISDLTSG 377
           Q++++E + S P   + ++  S S   +T EQQLEIMKYWLD+Y+K NRFDP ISDLTSG
Sbjct: 209 QTKVQETSDSSPDSPENTKSWSRS---QTREQQLEIMKYWLDKYHKKNRFDPVISDLTSG 265

Query: 378 RPWNEIEGKLLSQFMPVFKRYLSDNYVNTRTGDFYSLFFAALKDKHKVS 524
           +PWNEIEGKLLS+FMPVFKRYL DN +++RT +FY LFF AL+DKHK++
Sbjct: 266 KPWNEIEGKLLSRFMPVFKRYLLDNGLSSRTSEFYFLFFTALRDKHKIA 314


Top