BLASTX nr result

ID: Ophiopogon27_contig00047641 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00047641
         (465 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|POG82574.1| hypothetical protein GLOIN_2v785540 [Rhizophagus ...   299   e-102
dbj|GBC24190.1| mediator of RNA polymerase II transcription subu...   299   2e-94
gb|EXX68703.1| hypothetical protein RirG_102790 [Rhizophagus irr...   283   6e-91

>gb|POG82574.1| hypothetical protein GLOIN_2v785540 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 191

 Score =  299 bits (766), Expect = e-102
 Identities = 150/154 (97%), Positives = 152/154 (98%)
 Frame = +2

Query: 2   MFYEIKINMLSLQVSCRPIANVHLTNPSLSVERSPVLHLKLISNTQSHGVRLIIVTAEKK 181
           MFYEIKINMLSLQVSCRPIANVHLTNPSLSVERSPVLHLKLISNTQSHGVRLIIVTAEKK
Sbjct: 1   MFYEIKINMLSLQVSCRPIANVHLTNPSLSVERSPVLHLKLISNTQSHGVRLIIVTAEKK 60

Query: 182 GNNVFNSSIATWEIDKITPPLLDSLTENAMEIDMPLPSIHLVASKHLDQKLVTNIWIQDD 361
           GNNVFNSSIATWEIDKITP  LDSLTENAMEIDMPLPSIHLVAS+HLDQKLVTNIWIQDD
Sbjct: 61  GNNVFNSSIATWEIDKITPQPLDSLTENAMEIDMPLPSIHLVASEHLDQKLVTNIWIQDD 120

Query: 362 ELFLGLSDGQVQFRNCNTLEVLSQEQIGLKHFKD 463
           ELFLGLSDGQVQFRNCNTL+VLSQEQIGLKHFKD
Sbjct: 121 ELFLGLSDGQVQFRNCNTLQVLSQEQIGLKHFKD 154


>dbj|GBC24190.1| mediator of RNA polymerase II transcription subunit 16 [Rhizophagus
           irregularis DAOM 181602]
          Length = 831

 Score =  299 bits (766), Expect = 2e-94
 Identities = 150/154 (97%), Positives = 152/154 (98%)
 Frame = +2

Query: 2   MFYEIKINMLSLQVSCRPIANVHLTNPSLSVERSPVLHLKLISNTQSHGVRLIIVTAEKK 181
           MFYEIKINMLSLQVSCRPIANVHLTNPSLSVERSPVLHLKLISNTQSHGVRLIIVTAEKK
Sbjct: 260 MFYEIKINMLSLQVSCRPIANVHLTNPSLSVERSPVLHLKLISNTQSHGVRLIIVTAEKK 319

Query: 182 GNNVFNSSIATWEIDKITPPLLDSLTENAMEIDMPLPSIHLVASKHLDQKLVTNIWIQDD 361
           GNNVFNSSIATWEIDKITP  LDSLTENAMEIDMPLPSIHLVAS+HLDQKLVTNIWIQDD
Sbjct: 320 GNNVFNSSIATWEIDKITPQPLDSLTENAMEIDMPLPSIHLVASEHLDQKLVTNIWIQDD 379

Query: 362 ELFLGLSDGQVQFRNCNTLEVLSQEQIGLKHFKD 463
           ELFLGLSDGQVQFRNCNTL+VLSQEQIGLKHFKD
Sbjct: 380 ELFLGLSDGQVQFRNCNTLQVLSQEQIGLKHFKD 413


>gb|EXX68703.1| hypothetical protein RirG_102790 [Rhizophagus irregularis DAOM
           197198w]
          Length = 541

 Score =  283 bits (724), Expect = 6e-91
 Identities = 142/146 (97%), Positives = 144/146 (98%)
 Frame = +2

Query: 26  MLSLQVSCRPIANVHLTNPSLSVERSPVLHLKLISNTQSHGVRLIIVTAEKKGNNVFNSS 205
           MLSLQVSCRPIANVHLTNPSLSVERSPVLHLKLISNTQSHGVRLIIVTAEKKGNNVFNSS
Sbjct: 1   MLSLQVSCRPIANVHLTNPSLSVERSPVLHLKLISNTQSHGVRLIIVTAEKKGNNVFNSS 60

Query: 206 IATWEIDKITPPLLDSLTENAMEIDMPLPSIHLVASKHLDQKLVTNIWIQDDELFLGLSD 385
           IATWEIDKITP  LDSLTENAMEIDMPLPSIHLVAS+HLDQKLVTNIWIQDDELFLGLSD
Sbjct: 61  IATWEIDKITPQPLDSLTENAMEIDMPLPSIHLVASEHLDQKLVTNIWIQDDELFLGLSD 120

Query: 386 GQVQFRNCNTLEVLSQEQIGLKHFKD 463
           GQVQFRNCNTL+VLSQEQIGLKHFKD
Sbjct: 121 GQVQFRNCNTLQVLSQEQIGLKHFKD 146


Top