BLASTX nr result

ID: Ophiopogon27_contig00047630 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00047630
         (399 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX78363.1| Swi5p [Rhizophagus irregularis DAOM 197198w] >gi|...   235   5e-74
gb|PKK75183.1| hypothetical protein RhiirC2_737199 [Rhizophagus ...   130   6e-34

>gb|EXX78363.1| Swi5p [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC42416.1| c2h2 transcription factor [Rhizophagus irregularis DAOM 181602]
          Length = 429

 Score =  235 bits (600), Expect = 5e-74
 Identities = 119/127 (93%), Positives = 120/127 (94%)
 Frame = -2

Query: 383 MATTQYVRRKGDIEEPNAMNDDNLEATMSISIRQPNPQLVPIRPPSLKPESSRPKVSKIM 204
           MATTQYVRRKGDIEE NAMNDDNLEATM ISIRQPNPQLVPIRPPSLK ESSR KVSKIM
Sbjct: 1   MATTQYVRRKGDIEESNAMNDDNLEATMPISIRQPNPQLVPIRPPSLKSESSRSKVSKIM 60

Query: 203 RHANFSTVPPRSNLTKFHNSDFQEEFNRATTGSYVKLETKNFSHGVDKSSQIISGTASAV 24
           RHANFSTVPPRSNLTKFHNSDFQEEFNR TT SYVKLET NFSHGV+KSSQIISGTASAV
Sbjct: 61  RHANFSTVPPRSNLTKFHNSDFQEEFNRVTTVSYVKLETNNFSHGVNKSSQIISGTASAV 120

Query: 23  IPPAVVP 3
           IPPAVVP
Sbjct: 121 IPPAVVP 127


>gb|PKK75183.1| hypothetical protein RhiirC2_737199 [Rhizophagus irregularis]
          Length = 374

 Score =  130 bits (328), Expect = 6e-34
 Identities = 64/68 (94%), Positives = 65/68 (95%)
 Frame = -2

Query: 206 MRHANFSTVPPRSNLTKFHNSDFQEEFNRATTGSYVKLETKNFSHGVDKSSQIISGTASA 27
           MRHANFSTVPPRSNLTKFHNSDFQEEFNR TT SYVKLET NFSHGV+KSSQIISGTASA
Sbjct: 1   MRHANFSTVPPRSNLTKFHNSDFQEEFNRVTTVSYVKLETNNFSHGVNKSSQIISGTASA 60

Query: 26  VIPPAVVP 3
           VIPPAVVP
Sbjct: 61  VIPPAVVP 68


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