BLASTX nr result
ID: Ophiopogon27_contig00047574
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00047574
(556 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKY37962.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz... 360 e-112
gb|PKY17591.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz... 360 e-112
gb|PKK78623.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz... 360 e-112
dbj|GBC35266.1| DNA-directed RNA polymerase II subunit RPB1 [Rhi... 360 e-112
gb|PKC14123.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz... 358 e-111
gb|ABM26996.1| RNA polymerase II largest subunit, partial [Funne... 306 8e-95
gb|ABM26997.1| RNA polymerase II largest subunit, partial [Gigas... 239 4e-70
emb|CEI98631.1| Putative DNA-directed RNA polymerase (Fragment) ... 221 1e-63
emb|CEG73711.1| Putative DNA-directed RNA polymerase (Fragment) ... 221 1e-63
ref|XP_013026009.1| RNA polymerase II large subunit Rpb1 [Schizo... 220 4e-63
emb|CDS13468.1| Putative DNA-directed RNA polymerase(Fragment) [... 219 9e-63
ref|XP_013017875.1| RNA polymerase II large subunit Rpb1 [Schizo... 219 1e-62
gb|OZJ04949.1| DNA-directed RNA polymerase II subunit rpb1 [Bifi... 218 2e-62
emb|CDH50425.1| beta and beta-prime subunits of dna dependentrna... 217 4e-62
gb|ORZ25825.1| hypothetical protein BCR42DRAFT_401008 [Absidia r... 217 6e-62
gb|ORZ19705.1| RNA polymerase II [Absidia repens] 217 6e-62
ref|NP_595673.1| RNA polymerase II large subunit Rpb1 [Schizosac... 216 2e-61
gb|ORY95842.1| hypothetical protein BCR43DRAFT_525499 [Syncephal... 216 2e-61
emb|SAL97750.1| hypothetical protein [Absidia glauca] 215 2e-61
emb|SAM02467.1| hypothetical protein [Absidia glauca] 215 2e-61
>gb|PKY37962.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
Length = 1860
Score = 360 bits (925), Expect = e-112
Identities = 184/185 (99%), Positives = 185/185 (100%)
Frame = +1
Query: 1 VKIKSHDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKII 180
VKIKSHDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVN+KRLIKNAQQKFKII
Sbjct: 974 VKIKSHDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNLKRLIKNAQQKFKII 1033
Query: 181 PSQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVI 360
PSQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVI
Sbjct: 1034 PSQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVI 1093
Query: 361 DEFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSK 540
DEFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSK
Sbjct: 1094 DEFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSK 1153
Query: 541 NVTLG 555
NVTLG
Sbjct: 1154 NVTLG 1158
>gb|PKY17591.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
Length = 1861
Score = 360 bits (925), Expect = e-112
Identities = 184/185 (99%), Positives = 185/185 (100%)
Frame = +1
Query: 1 VKIKSHDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKII 180
VKIKSHDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVN+KRLIKNAQQKFKII
Sbjct: 974 VKIKSHDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNLKRLIKNAQQKFKII 1033
Query: 181 PSQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVI 360
PSQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVI
Sbjct: 1034 PSQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVI 1093
Query: 361 DEFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSK 540
DEFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSK
Sbjct: 1094 DEFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSK 1153
Query: 541 NVTLG 555
NVTLG
Sbjct: 1154 NVTLG 1158
>gb|PKK78623.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
Length = 1861
Score = 360 bits (925), Expect = e-112
Identities = 184/185 (99%), Positives = 185/185 (100%)
Frame = +1
Query: 1 VKIKSHDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKII 180
VKIKSHDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVN+KRLIKNAQQKFKII
Sbjct: 974 VKIKSHDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNLKRLIKNAQQKFKII 1033
Query: 181 PSQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVI 360
PSQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVI
Sbjct: 1034 PSQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVI 1093
Query: 361 DEFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSK 540
DEFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSK
Sbjct: 1094 DEFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSK 1153
Query: 541 NVTLG 555
NVTLG
Sbjct: 1154 NVTLG 1158
>dbj|GBC35266.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis
DAOM 181602]
gb|PKC73289.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
gb|POG69694.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis
DAOM 181602=DAOM 197198]
Length = 1861
Score = 360 bits (925), Expect = e-112
Identities = 184/185 (99%), Positives = 185/185 (100%)
Frame = +1
Query: 1 VKIKSHDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKII 180
VKIKSHDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVN+KRLIKNAQQKFKII
Sbjct: 974 VKIKSHDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNLKRLIKNAQQKFKII 1033
Query: 181 PSQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVI 360
PSQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVI
Sbjct: 1034 PSQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVI 1093
Query: 361 DEFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSK 540
DEFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSK
Sbjct: 1094 DEFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSK 1153
Query: 541 NVTLG 555
NVTLG
Sbjct: 1154 NVTLG 1158
>gb|PKC14123.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
Length = 1861
Score = 358 bits (918), Expect = e-111
Identities = 183/185 (98%), Positives = 184/185 (99%)
Frame = +1
Query: 1 VKIKSHDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKII 180
VKIKSHDEIVKEKIRAEYEQLKTDRFLLQTF FPKGDNRWPLPVN+KRLIKNAQQKFKII
Sbjct: 974 VKIKSHDEIVKEKIRAEYEQLKTDRFLLQTFNFPKGDNRWPLPVNLKRLIKNAQQKFKII 1033
Query: 181 PSQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVI 360
PSQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVI
Sbjct: 1034 PSQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVI 1093
Query: 361 DEFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSK 540
DEFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSK
Sbjct: 1094 DEFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSK 1153
Query: 541 NVTLG 555
NVTLG
Sbjct: 1154 NVTLG 1158
>gb|ABM26996.1| RNA polymerase II largest subunit, partial [Funneliformis mosseae]
Length = 1054
Score = 306 bits (784), Expect = 8e-95
Identities = 154/165 (93%), Positives = 162/165 (98%)
Frame = +1
Query: 4 KIKSHDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKIIP 183
KIKSHDEIVK+KI+AEYEQLK DR LLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKIIP
Sbjct: 890 KIKSHDEIVKDKIKAEYEQLKEDRHLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKIIP 949
Query: 184 SQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVID 363
SQRTKSDLQFVDVID+++ELLSKLE+VKGKDRISVEAQSNATLLFKIL+RSWLASKRVID
Sbjct: 950 SQRTKSDLQFVDVIDSIDELLSKLEVVKGKDRISVEAQSNATLLFKILIRSWLASKRVID 1009
Query: 364 EFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQ 498
EFHLNQQALKWILGEIE RF+RSLVSPGEMVGTVAAQSIGEPATQ
Sbjct: 1010 EFHLNQQALKWILGEIESRFRRSLVSPGEMVGTVAAQSIGEPATQ 1054
>gb|ABM26997.1| RNA polymerase II largest subunit, partial [Gigaspora gigantea]
Length = 1039
Score = 239 bits (610), Expect = 4e-70
Identities = 119/164 (72%), Positives = 142/164 (86%)
Frame = +1
Query: 4 KIKSHDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKIIP 183
K K+ EI++EKI EY QLK DR +LQ IF GDN+WPLPVNIKRLIKNAQQKF I P
Sbjct: 876 KPKTQQEIIREKIVEEYVQLKRDREMLQRDIFTNGDNKWPLPVNIKRLIKNAQQKFNIRP 935
Query: 184 SQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVID 363
S+ T +DLQ++DVI++VEE++S+L +VKG D+IS EAQ+NAT LFKILLRSWLAS+RVI+
Sbjct: 936 SRWTTTDLQYIDVINSVEEVMSRLVVVKGNDQISHEAQTNATTLFKILLRSWLASRRVIE 995
Query: 364 EFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPAT 495
EFHLN QALKW+LGE+E RF++SLVSPGEMVGTVAAQSIGEPAT
Sbjct: 996 EFHLNSQALKWVLGEVESRFRKSLVSPGEMVGTVAAQSIGEPAT 1039
>emb|CEI98631.1| Putative DNA-directed RNA polymerase (Fragment) [Rhizopus
microsporus]
Length = 1765
Score = 221 bits (564), Expect = 1e-63
Identities = 113/172 (65%), Positives = 134/172 (77%)
Frame = +1
Query: 40 IRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKIIPSQRTKSDLQFVD 219
+ E+ QL+ DR LQT IF G+++WPLPVN+ RLI NAQQ F I P RT SD+
Sbjct: 482 LEQEFAQLQEDRHKLQTTIFKNGEDKWPLPVNLSRLIVNAQQIFHIDP--RTPSDINPFQ 539
Query: 220 VIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVIDEFHLNQQALKWI 399
VID V ++ +L +V+GKD+IS E Q NATLLF ILLRS LA KRV++E+HL QA WI
Sbjct: 540 VIDGVSSIVDRLHVVRGKDKISAETQKNATLLFGILLRSTLAVKRVVEEYHLTSQAFDWI 599
Query: 400 LGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 555
LGEIE RF +S+V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLG
Sbjct: 600 LGEIEARFLQSVVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 651
Score = 221 bits (564), Expect = 1e-63
Identities = 113/172 (65%), Positives = 134/172 (77%)
Frame = +1
Query: 40 IRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKIIPSQRTKSDLQFVD 219
+ E+ QL+ DR LQT IF G+++WPLPVN+ RLI NAQQ F I P RT SD+
Sbjct: 990 LEQEFAQLQEDRHKLQTTIFKNGEDKWPLPVNLSRLIVNAQQIFHIDP--RTPSDINPFQ 1047
Query: 220 VIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVIDEFHLNQQALKWI 399
VID V ++ +L +V+GKD+IS E Q NATLLF ILLRS LA KRV++E+HL QA WI
Sbjct: 1048 VIDGVSSIVDRLHVVRGKDKISAETQKNATLLFGILLRSTLAVKRVVEEYHLTSQAFDWI 1107
Query: 400 LGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 555
LGEIE RF +S+V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLG
Sbjct: 1108 LGEIEARFLQSVVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 1159
>emb|CEG73711.1| Putative DNA-directed RNA polymerase (Fragment) [Rhizopus
microsporus]
Length = 1692
Score = 221 bits (564), Expect = 1e-63
Identities = 113/172 (65%), Positives = 134/172 (77%)
Frame = +1
Query: 40 IRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKIIPSQRTKSDLQFVD 219
+ E+ QL+ DR LQT IF G+++WPLPVN+ RLI NAQQ F I P RT SD+
Sbjct: 943 LEQEFAQLQEDRHKLQTTIFKNGEDKWPLPVNLSRLIVNAQQIFHIDP--RTPSDINPFQ 1000
Query: 220 VIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVIDEFHLNQQALKWI 399
VID V ++ +L +V+GKD+IS E Q NATLLF ILLRS LA KRV++E+HL QA WI
Sbjct: 1001 VIDGVSSIVDRLHVVRGKDKISAETQKNATLLFGILLRSTLAVKRVVEEYHLTSQAFDWI 1060
Query: 400 LGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 555
LGEIE RF +S+V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLG
Sbjct: 1061 LGEIEARFLQSVVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 1112
>ref|XP_013026009.1| RNA polymerase II large subunit Rpb1 [Schizosaccharomyces cryophilus
OY26]
gb|EPY49167.1| RNA polymerase II large subunit Rpb1 [Schizosaccharomyces cryophilus
OY26]
Length = 1686
Score = 220 bits (561), Expect = 4e-63
Identities = 111/180 (61%), Positives = 143/180 (79%)
Frame = +1
Query: 16 HDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKIIPSQRT 195
+D +V++ + AE+ QL DR LL FIFPKGD RWP+PVN++R+I+NA Q F + R
Sbjct: 923 NDPVVQDLLDAEFTQLSKDRDLLCNFIFPKGDARWPMPVNVQRIIQNACQIFHL--ESRK 980
Query: 196 KSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVIDEFHL 375
SDL D+I + EL++KL+I +G DRI+ + Q+NATLLF+I LRS A KRVI E+HL
Sbjct: 981 PSDLLPGDIIQGLNELINKLKIFRGDDRITQDVQNNATLLFQIHLRSKFAVKRVITEYHL 1040
Query: 376 NQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 555
N+ A +W++GE+E RFQ+++VSPGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLG
Sbjct: 1041 NKVAFEWVMGEVESRFQQAVVSPGEMVGTLAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 1100
>emb|CDS13468.1| Putative DNA-directed RNA polymerase(Fragment) [Lichtheimia ramosa]
Length = 1743
Score = 219 bits (558), Expect = 9e-63
Identities = 108/185 (58%), Positives = 143/185 (77%)
Frame = +1
Query: 1 VKIKSHDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKII 180
+K ++E+++ ++ E+ +L+ DR LL+ +IF G+++WPLPVN++RLI NAQQ F I
Sbjct: 900 LKAVENNEMLQNQLDQEFARLEEDRHLLREYIFKDGEDKWPLPVNLQRLITNAQQIFHID 959
Query: 181 PSQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVI 360
P R SD+ + VID + L +L +V+G D+IS EAQ NAT LF+ LLRS A KRV+
Sbjct: 960 P--RKPSDIHPLQVIDGISSLADRLLVVRGNDKISAEAQKNATCLFRALLRSTFAVKRVV 1017
Query: 361 DEFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSK 540
+E+HL QA +WILGE+E RFQ ++V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSK
Sbjct: 1018 EEYHLTSQAFEWILGEVESRFQTAMVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSK 1077
Query: 541 NVTLG 555
NVTLG
Sbjct: 1078 NVTLG 1082
>ref|XP_013017875.1| RNA polymerase II large subunit Rpb1 [Schizosaccharomyces octosporus
yFS286]
gb|EPX72235.1| RNA polymerase II large subunit Rpb1 [Schizosaccharomyces octosporus
yFS286]
Length = 1759
Score = 219 bits (557), Expect = 1e-62
Identities = 112/180 (62%), Positives = 142/180 (78%)
Frame = +1
Query: 16 HDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKIIPSQRT 195
+D V++ + AE+ QL DR LL FIFPKGD RWP+PVN++R+I+NA Q F + R
Sbjct: 923 NDPDVQDLLDAEFAQLSNDRDLLCNFIFPKGDARWPMPVNVQRIIQNACQIFHL--ESRK 980
Query: 196 KSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVIDEFHL 375
SDL D+I + EL++KL+I +G DRI+ + Q+NATLLF+I LRS A KRVI E+HL
Sbjct: 981 PSDLLPGDIIQGLNELINKLKIFRGDDRITQDVQNNATLLFQIHLRSKFAVKRVITEYHL 1040
Query: 376 NQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 555
N+ A +WI+GE+E RFQ+++VSPGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLG
Sbjct: 1041 NKVAFEWIMGEVESRFQQAVVSPGEMVGTLAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 1100
>gb|OZJ04949.1| DNA-directed RNA polymerase II subunit rpb1 [Bifiguratus adelaidae]
Length = 2059
Score = 218 bits (556), Expect = 2e-62
Identities = 109/179 (60%), Positives = 143/179 (79%)
Frame = +1
Query: 19 DEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKIIPSQRTK 198
+E V+ + AEY QL +R LL+ FIF G+++WPLP N++RL+ NAQQ F I +R
Sbjct: 936 NEEVQAILDAEYRQLAEERSLLREFIFTTGEDKWPLPTNLQRLVTNAQQIFHI--DRRKP 993
Query: 199 SDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVIDEFHLN 378
SDL ++ +V+EL +L +V+G D+IS EAQSNATLLF+ILLRS ++KRV+DEFHL+
Sbjct: 994 SDLHPSHIVQSVKELSERLTVVRGSDKISYEAQSNATLLFQILLRSTFSAKRVLDEFHLD 1053
Query: 379 QQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 555
+++ +W+LGE+E RF S+V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLG
Sbjct: 1054 KKSFEWLLGEVESRFLMSIVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 1112
>emb|CDH50425.1| beta and beta-prime subunits of dna dependentrna-polymerase
[Lichtheimia corymbifera JMRC:FSU:9682]
Length = 1774
Score = 217 bits (553), Expect = 4e-62
Identities = 109/185 (58%), Positives = 142/185 (76%)
Frame = +1
Query: 1 VKIKSHDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKII 180
+K +E+++ ++ E+ +L+ DR LL+ +IF G+++WPLPVN++RLI NAQQ F I
Sbjct: 931 LKAVEGNEMLQNQLDQEFLRLEEDRHLLREYIFKDGEDKWPLPVNLQRLITNAQQIFHID 990
Query: 181 PSQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVI 360
P R SD+ + VID + L +L +V+G D+IS EAQ NAT LF+ LLRS A KRV+
Sbjct: 991 P--RKPSDIHPLQVIDGISSLADRLLVVRGSDKISAEAQKNATCLFRSLLRSTFAVKRVV 1048
Query: 361 DEFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSK 540
+E+HL QA +WILGEIE RFQ ++V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSK
Sbjct: 1049 EEYHLTSQAFEWILGEIESRFQTAMVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSK 1108
Query: 541 NVTLG 555
NVTLG
Sbjct: 1109 NVTLG 1113
>gb|ORZ25825.1| hypothetical protein BCR42DRAFT_401008 [Absidia repens]
Length = 1633
Score = 217 bits (552), Expect = 6e-62
Identities = 106/179 (59%), Positives = 140/179 (78%)
Frame = +1
Query: 19 DEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKIIPSQRTK 198
+E ++ + E+ QL+ DR +++ FIF +GD++WPLPVN++RLI NAQQ F I P R
Sbjct: 859 NETAQQYLDQEFLQLQEDRDIMRRFIFKQGDDKWPLPVNLQRLITNAQQIFHIDP--RKA 916
Query: 199 SDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVIDEFHLN 378
SD+ + ++D + L +L +V+G D+IS E Q NATLLF++LLRS A KRV++EFHL+
Sbjct: 917 SDVHPLQIVDGISSLAERLVVVRGSDKISAETQRNATLLFQMLLRSTFAVKRVVEEFHLS 976
Query: 379 QQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 555
QA +W+LGE+E RF S+V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLG
Sbjct: 977 SQAFEWVLGEVESRFLTSVVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 1035
>gb|ORZ19705.1| RNA polymerase II [Absidia repens]
Length = 1585
Score = 217 bits (552), Expect = 6e-62
Identities = 106/179 (59%), Positives = 140/179 (78%)
Frame = +1
Query: 19 DEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKIIPSQRTK 198
+E ++ + E+ QL+ DR +++ FIF +GD++WPLPVN++RLI NAQQ F I P R
Sbjct: 923 NETAQQYLDQEFLQLREDRDIMRRFIFKQGDDKWPLPVNLQRLITNAQQIFHIDP--RKA 980
Query: 199 SDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVIDEFHLN 378
SD+ + ++D + L +L +V+G D+IS E Q NATLLF++LLRS A KRV++EFHL+
Sbjct: 981 SDVHPLQIVDGISSLAERLVVVRGTDKISAETQRNATLLFQMLLRSTFAVKRVVEEFHLS 1040
Query: 379 QQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 555
QA +W+LGE+E RF S+V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLG
Sbjct: 1041 SQAFEWVLGEVESRFLTSVVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 1099
>ref|NP_595673.1| RNA polymerase II large subunit Rpb1 [Schizosaccharomyces pombe]
sp|P36594.1|RPB1_SCHPO RecName: Full=DNA-directed RNA polymerase II subunit rpb1; Short=RNA
polymerase II subunit 1; Short=RNA polymerase II subunit
B1; AltName: Full=DNA-directed RNA polymerase III largest
subunit
pdb|3H0G|A Chain A, Rna Polymerase Ii From Schizosaccharomyces Pombe
pdb|3H0G|M Chain M, Rna Polymerase Ii From Schizosaccharomyces Pombe
pdb|5U0S|AA Chain a, Cryo-em Structure Of The Mediator-rnapii Complex
emb|CAA39916.1| RNA polymerase II large subunit [Schizosaccharomyces pombe]
emb|CAB57941.1| RNA polymerase II large subunit Rpb1 [Schizosaccharomyces pombe]
Length = 1752
Score = 216 bits (549), Expect = 2e-61
Identities = 112/180 (62%), Positives = 141/180 (78%)
Frame = +1
Query: 16 HDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKIIPSQRT 195
+D V++ + EY QL DR LL FIFPKGD RWPLPVN++R+I+NA Q F + + T
Sbjct: 923 NDSSVQDLLDEEYTQLVADRELLCKFIFPKGDARWPLPVNVQRIIQNALQIFHLEAKKPT 982
Query: 196 KSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVIDEFHL 375
DL D+I+ + EL++KL I +G DRI+ + Q+NATLLF+ILLRS A KRVI E+ L
Sbjct: 983 --DLLPSDIINGLNELIAKLTIFRGSDRITRDVQNNATLLFQILLRSKFAVKRVIMEYRL 1040
Query: 376 NQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 555
N+ A +WI+GE+E RFQ+++VSPGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLG
Sbjct: 1041 NKVAFEWIMGEVEARFQQAVVSPGEMVGTLAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 1100
>gb|ORY95842.1| hypothetical protein BCR43DRAFT_525499 [Syncephalastrum racemosum]
Length = 1745
Score = 216 bits (549), Expect = 2e-61
Identities = 110/185 (59%), Positives = 140/185 (75%)
Frame = +1
Query: 1 VKIKSHDEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKII 180
+K +D + ++ E+ +L DR LL+ IF G+++WPLPVN++RLI NAQQ F I
Sbjct: 927 LKSIENDADLPDEFAKEFTRLADDRELLRNHIFKNGEDKWPLPVNLQRLITNAQQIFHID 986
Query: 181 PSQRTKSDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVI 360
P R SD+ + V+D V L +L +V+G D+IS+EAQ NAT LF+ LLRS A+KRVI
Sbjct: 987 P--RKPSDIHPMQVLDGVASLADRLLVVRGNDKISLEAQRNATTLFQALLRSTFATKRVI 1044
Query: 361 DEFHLNQQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSK 540
+E+HL QA +W+LGE+E RFQ SLV+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSK
Sbjct: 1045 EEYHLTSQAFEWVLGELETRFQTSLVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSK 1104
Query: 541 NVTLG 555
NVTLG
Sbjct: 1105 NVTLG 1109
>emb|SAL97750.1| hypothetical protein [Absidia glauca]
Length = 1682
Score = 215 bits (548), Expect = 2e-61
Identities = 105/179 (58%), Positives = 139/179 (77%)
Frame = +1
Query: 19 DEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKIIPSQRTK 198
+E ++ + E+ QL DR +++ FIF GD++WPLPVN++RLI NAQQ F I P R
Sbjct: 956 NETAQQLLDQEFLQLNEDRDIMRRFIFKHGDDKWPLPVNLQRLITNAQQMFHIDP--RRP 1013
Query: 199 SDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVIDEFHLN 378
SD+ + ++D++ L +L +V+G D+IS E Q NATLLF+++LRS + KRV++EFHL+
Sbjct: 1014 SDVHPLQIVDSISSLADRLIVVRGSDKISAETQRNATLLFQMMLRSTFSVKRVVEEFHLS 1073
Query: 379 QQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 555
QA +W+LGEIE RF S+V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLG
Sbjct: 1074 SQAFEWVLGEIESRFLTSIVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 1132
>emb|SAM02467.1| hypothetical protein [Absidia glauca]
Length = 1583
Score = 215 bits (548), Expect = 2e-61
Identities = 106/179 (59%), Positives = 139/179 (77%)
Frame = +1
Query: 19 DEIVKEKIRAEYEQLKTDRFLLQTFIFPKGDNRWPLPVNIKRLIKNAQQKFKIIPSQRTK 198
+E ++ + E+ QL DR +++ FIF +GD++WPLPVN++RLI NAQQ F I P R
Sbjct: 935 NETAQQLLDQEFLQLSEDRDIMRRFIFKQGDDKWPLPVNLQRLITNAQQMFHIDP--RKP 992
Query: 199 SDLQFVDVIDNVEELLSKLEIVKGKDRISVEAQSNATLLFKILLRSWLASKRVIDEFHLN 378
SD+ + ++D + L +L +V+G D+IS E Q NATLLF++LLRS + KRV++EFHL+
Sbjct: 993 SDVHPLQILDCISSLADRLVVVRGSDKISAETQRNATLLFQMLLRSTFSVKRVVEEFHLS 1052
Query: 379 QQALKWILGEIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 555
QA +W+LGEIE RF S+V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLG
Sbjct: 1053 SQAFEWVLGEIESRFLTSIVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLG 1111