BLASTX nr result

ID: Ophiopogon27_contig00047242 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00047242
         (457 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX50740.1| hypothetical protein RirG_267940 [Rhizophagus irr...   157   1e-43
dbj|GBC46313.1| ran protein binding protein [Rhizophagus irregul...   157   1e-41

>gb|EXX50740.1| hypothetical protein RirG_267940 [Rhizophagus irregularis DAOM
           197198w]
          Length = 391

 Score =  157 bits (397), Expect = 1e-43
 Identities = 88/151 (58%), Positives = 101/151 (66%)
 Frame = +3

Query: 3   CVGASAHTRKNRDKGLIRXXXXXXXXXXXXXXXXXIVDFTLFNNEIVKPINNKAGSVYLA 182
           CVGA AHTRKNRD+GLIR                 IVDF LFNN IVKPINNKAGSVYLA
Sbjct: 117 CVGAFAHTRKNRDRGLIRVAAQSSALAFVFVLFAFIVDFILFNNGIVKPINNKAGSVYLA 176

Query: 183 EFDIAYYLVIACLVSSGLATISFFIGKVMNSRRRKKGLEKESFESEENDDFYSEVRANEG 362
           EFDIAYYLVIACLVSSGLATISFF+G++MN RRRK   E  SF+  +++DF SE R + G
Sbjct: 177 EFDIAYYLVIACLVSSGLATISFFVGRIMNKRRRKSE-ESSSFDDSKSEDFRSEQRIS-G 234

Query: 363 SREQNQNQNQHIPKYAXXXXXXXXXDAVKPS 455
            R+QN      +PK+A         D +K S
Sbjct: 235 FRDQN------VPKFAEFEEDVVEADPIKQS 259


>dbj|GBC46313.1| ran protein binding protein [Rhizophagus irregularis DAOM 181602]
          Length = 847

 Score =  157 bits (397), Expect = 1e-41
 Identities = 88/151 (58%), Positives = 101/151 (66%)
 Frame = +3

Query: 3    CVGASAHTRKNRDKGLIRXXXXXXXXXXXXXXXXXIVDFTLFNNEIVKPINNKAGSVYLA 182
            CVGA AHTRKNRD+GLIR                 IVDF LFNN IVKPINNKAGSVYLA
Sbjct: 573  CVGAFAHTRKNRDRGLIRVAAQSSALAFVFVLFAFIVDFILFNNGIVKPINNKAGSVYLA 632

Query: 183  EFDIAYYLVIACLVSSGLATISFFIGKVMNSRRRKKGLEKESFESEENDDFYSEVRANEG 362
            EFDIAYYLVIACLVSSGLATISFF+G++MN RRRK   E  SF+  +++DF SE R + G
Sbjct: 633  EFDIAYYLVIACLVSSGLATISFFVGRIMNKRRRKSE-ESSSFDDSKSEDFRSEQRIS-G 690

Query: 363  SREQNQNQNQHIPKYAXXXXXXXXXDAVKPS 455
             R+QN      +PK+A         D +K S
Sbjct: 691  FRDQN------VPKFAEFEEDVVEADPIKQS 715


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