BLASTX nr result

ID: Ophiopogon27_contig00047214 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00047214
         (578 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKK74972.1| hypothetical protein RhiirC2_266299 [Rhizophagus ...   115   4e-29
gb|EXX73257.1| hypothetical protein RirG_061880 [Rhizophagus irr...   115   4e-29
dbj|GBC53175.1| hypothetical protein RIR_3441700 [Rhizophagus ir...    69   1e-11

>gb|PKK74972.1| hypothetical protein RhiirC2_266299 [Rhizophagus irregularis]
 gb|PKY48604.1| hypothetical protein RhiirA4_404580 [Rhizophagus irregularis]
          Length = 157

 Score =  115 bits (287), Expect = 4e-29
 Identities = 65/162 (40%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
 Frame = -3

Query: 516 MFAFWRYXXXXXXXXXXXXXXXXXXXXXVYDVQVPSNLPLKGIKDIPPADTIIPNIFAQI 337
           M  +WR+                     +YD++   NLP KGIKDIPP+D I+PNIFAQI
Sbjct: 1   MLVYWRFTIAFFSIAITFIAFYYLVKISIYDIKFADNLPSKGIKDIPPSDVILPNIFAQI 60

Query: 336 XXXXXXXXXXXXXXXXXXXXXXXXXPFNFQNVTPQQCFDYAKNCRDVQCAFQGFSVLCDN 157
                                      NF +++ QQCFDYAKNCRD+QCAF+ F+  C+N
Sbjct: 61  PLSPPTEQTAQNTRPALSNTGNSTT-LNF-DISAQQCFDYAKNCRDIQCAFKDFNFTCNN 118

Query: 156 NGNGPTCTCGMGQTSGTSSIKSNVHL-VFLTISILIISFYQF 34
           N  GP CTCG  Q S  SSI SN    +F++   L+IS Y +
Sbjct: 119 N-KGPVCTCGASQISSASSILSNAFFPIFIS---LVISVYYY 156


>gb|EXX73257.1| hypothetical protein RirG_061880 [Rhizophagus irregularis DAOM
           197198w]
 gb|PKC11121.1| hypothetical protein RhiirA5_354666 [Rhizophagus irregularis]
 gb|PKC69232.1| hypothetical protein RhiirA1_415901 [Rhizophagus irregularis]
 gb|PKY12637.1| hypothetical protein RhiirB3_397669 [Rhizophagus irregularis]
          Length = 157

 Score =  115 bits (287), Expect = 4e-29
 Identities = 65/162 (40%), Positives = 84/162 (51%), Gaps = 1/162 (0%)
 Frame = -3

Query: 516 MFAFWRYXXXXXXXXXXXXXXXXXXXXXVYDVQVPSNLPLKGIKDIPPADTIIPNIFAQI 337
           M  +WR+                     +YD++   NLP KGIKDIPP+D I+PNIFAQI
Sbjct: 1   MLVYWRFTIAFFSIAITFIAFYYLVKISIYDIKFADNLPSKGIKDIPPSDVILPNIFAQI 60

Query: 336 XXXXXXXXXXXXXXXXXXXXXXXXXPFNFQNVTPQQCFDYAKNCRDVQCAFQGFSVLCDN 157
                                      NF +++ QQCFDYAKNCRD+QCAF+ F+  C+N
Sbjct: 61  PLSPPTEKTAQNTRPALSNTGNSTT-LNF-DISAQQCFDYAKNCRDIQCAFKDFNFTCNN 118

Query: 156 NGNGPTCTCGMGQTSGTSSIKSNVHL-VFLTISILIISFYQF 34
           N  GP CTCG  Q S  SSI SN    +F++   L+IS Y +
Sbjct: 119 N-KGPVCTCGASQISSASSILSNAFFPIFIS---LVISVYYY 156


>dbj|GBC53175.1| hypothetical protein RIR_3441700 [Rhizophagus irregularis DAOM
           181602]
          Length = 127

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 50/162 (30%), Positives = 65/162 (40%), Gaps = 1/162 (0%)
 Frame = -3

Query: 516 MFAFWRYXXXXXXXXXXXXXXXXXXXXXVYDVQVPSNLPLKGIKDIPPADTIIPNIFAQI 337
           M  +WR+                     +YD++   NLP KGIKDIPP+D I+PNIFAQI
Sbjct: 1   MLVYWRFTIAFFSIAITFIAFYYLVKISIYDIKFADNLPSKGIKDIPPSDVILPNIFAQI 60

Query: 336 XXXXXXXXXXXXXXXXXXXXXXXXXPFNFQNVTPQQCFDYAKNCRDVQCAFQGFSVLCDN 157
                                        QN  P               +   F+  C+N
Sbjct: 61  PLSPPTEK-------------------TAQNTRP-------------ALSNTDFNFTCNN 88

Query: 156 NGNGPTCTCGMGQTSGTSSIKSNVHL-VFLTISILIISFYQF 34
           N  GP CTCG  Q S  SSI SN    +F++   L+IS Y +
Sbjct: 89  N-KGPVCTCGASQISSASSILSNAFFPIFIS---LVISVYYY 126


Top