BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00046412
         (1411 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY44653.1| hypothetical protein RhiirA4_400167, partial [Rhi...    68   1e-08
gb|EXX55284.1| hypothetical protein RirG_226720 [Rhizophagus irr...    67   2e-08
ref|XP_012687401.1| PREDICTED: transcription intermediary factor...    61   5e-06
ref|XP_012687400.1| PREDICTED: transcription intermediary factor...    61   5e-06

>gb|PKY44653.1| hypothetical protein RhiirA4_400167, partial [Rhizophagus
            irregularis]
          Length = 433

 Score = 68.2 bits (165), Expect = 1e-08
 Identities = 75/239 (31%), Positives = 107/239 (44%), Gaps = 6/239 (2%)
 Frame = -2

Query: 1275 KESASDIDRVETLPSGVESVEKSPKDVDRA--ERLSNDLFVGISSNNISVKKSDKVELSN 1102
            KE+AS    +  L   V     S K++  +  + L    F+ I S +++  ++      N
Sbjct: 106  KEAASATTDISGLQENV-----SQKNIVSSTNQELQEPQFIEIDSRDLTENETSNKTDEN 160

Query: 1101 FIDRVENSSTKKISRVNLLDDDFFESFNSLSF-EPKSLLQRXXXXXXXXXXXXXTLSLSN 925
                 E   T++   VNLLDD+FFES NSL   +P + ++                  S 
Sbjct: 161  SEKEDEKEKTRQ---VNLLDDEFFESLNSLKLTKPINEIEAIETIETIE---------ST 208

Query: 924  PSAFSPFLELGRPKRRQDQNTVEQLKDMIEQYEDTIKENPILAAS---IMDQIRSSVDSE 754
            PS      E  +P +      ++Q + +IEQ +D IKENP L AS   IMDQIR      
Sbjct: 209  PS------EQDQP-QEDSAVDLQQFQMIIEQNQDAIKENPQLIASIKDIMDQIR------ 255

Query: 753  RLDPFPRPTQSKEDKHNSYFRQHPITSPVSGRSRSATPPRFVDYNRSPMPEHTRSSTPP 577
            +LD F  P   K  K N  F   PIT P+ G +R++       +N  P  E  RS TPP
Sbjct: 256  QLDSFREPIM-KSRKRNKNFLNRPITPPIPGCTRNS-------FNVFPTSEF-RSLTPP 305


>gb|EXX55284.1| hypothetical protein RirG_226720 [Rhizophagus irregularis DAOM
            197198w]
 dbj|GBC38457.1| hypothetical protein RIR_2237800 [Rhizophagus irregularis DAOM
            181602]
          Length = 431

 Score = 67.4 bits (163), Expect = 2e-08
 Identities = 75/239 (31%), Positives = 106/239 (44%), Gaps = 6/239 (2%)
 Frame = -2

Query: 1275 KESASDIDRVETLPSGVESVEKSPKDVDRA--ERLSNDLFVGISSNNISVKKSDKVELSN 1102
            KE+AS    +  L   V     S K++  +  + L    F+ I S +++  ++      N
Sbjct: 106  KEAASATTDISGLQENV-----SQKNIVSSTNQELQEPQFIEIDSRDLTENETSNKTDEN 160

Query: 1101 FIDRVENSSTKKISRVNLLDDDFFESFNSLSF-EPKSLLQRXXXXXXXXXXXXXTLSLSN 925
                 E   T++   VNLLDD+FFES NSL   +P + ++                  S 
Sbjct: 161  SEKEDEKEKTRQ---VNLLDDEFFESLNSLKLTKPINEIEAIETIE------------ST 205

Query: 924  PSAFSPFLELGRPKRRQDQNTVEQLKDMIEQYEDTIKENPILAAS---IMDQIRSSVDSE 754
            PS      E  +P +      ++Q + +IEQ +D IKENP L AS   IMDQIR      
Sbjct: 206  PS------EQDQP-QEDSAVDLQQFQMIIEQNQDAIKENPQLIASIKDIMDQIR------ 252

Query: 753  RLDPFPRPTQSKEDKHNSYFRQHPITSPVSGRSRSATPPRFVDYNRSPMPEHTRSSTPP 577
            +LD F  P   K  K N  F   PIT P+ G +R +       +N  P  E  RS TPP
Sbjct: 253  QLDSFREPIM-KSRKRNKNFLNRPITPPIPGCTRHS-------FNVFPTSEF-RSLTPP 302


>ref|XP_012687401.1| PREDICTED: transcription intermediary factor 1-alpha-like isoform X2
            [Clupea harengus]
          Length = 1187

 Score = 60.8 bits (146), Expect = 5e-06
 Identities = 38/114 (33%), Positives = 59/114 (51%)
 Frame = -2

Query: 1410 DAEREKELPSDVESEKESQNDVEREKESQNDDNIVEESPKDADRVKESASDIDRVETLPS 1231
            DAE +++ P D + +++S  D E +++S  D  + E+SPKDAD  ++SA D D  E  P 
Sbjct: 1046 DAEVQEDSPKDADVQEDSHMDAEGQEDSHMDAEVQEDSPKDADVQEDSAMDADVQEDSPK 1105

Query: 1230 GVESVEKSPKDVDRAERLSNDLFVGISSNNISVKKSDKVELSNFIDRVENSSTK 1069
              ++ E SPK+ +  E  + D  V       S K +D  E S     V+  S K
Sbjct: 1106 DADAQEDSPKEAEGQEDSAKDADV----QEDSAKDADVQEDSAKEAEVQEDSPK 1155


>ref|XP_012687400.1| PREDICTED: transcription intermediary factor 1-alpha-like isoform X1
            [Clupea harengus]
          Length = 1192

 Score = 60.8 bits (146), Expect = 5e-06
 Identities = 38/114 (33%), Positives = 59/114 (51%)
 Frame = -2

Query: 1410 DAEREKELPSDVESEKESQNDVEREKESQNDDNIVEESPKDADRVKESASDIDRVETLPS 1231
            DAE +++ P D + +++S  D E +++S  D  + E+SPKDAD  ++SA D D  E  P 
Sbjct: 1051 DAEVQEDSPKDADVQEDSHMDAEGQEDSHMDAEVQEDSPKDADVQEDSAMDADVQEDSPK 1110

Query: 1230 GVESVEKSPKDVDRAERLSNDLFVGISSNNISVKKSDKVELSNFIDRVENSSTK 1069
              ++ E SPK+ +  E  + D  V       S K +D  E S     V+  S K
Sbjct: 1111 DADAQEDSPKEAEGQEDSAKDADV----QEDSAKDADVQEDSAKEAEVQEDSPK 1160