BLASTX nr result

ID: Ophiopogon27_contig00046401 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00046401
         (406 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD63191.1| hypothetical protein 20.t00043 [Asparagus officin...    72   2e-12

>gb|ABD63191.1| hypothetical protein 20.t00043 [Asparagus officinalis]
          Length = 316

 Score = 72.4 bits (176), Expect = 2e-12
 Identities = 43/94 (45%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
 Frame = -1

Query: 385 VESLVSEFDQAKFQEYLSLASSRGVTSRKCRKVVHEPNFKQARVVLPECSVWAFTWGSIP 206
           VESL+ EFDQAK++EYLS +SS G  SRKC +VV     + A   +PE S  A   GSI 
Sbjct: 28  VESLIIEFDQAKYKEYLSTSSSNGNASRKCHRVVRVTRPQVAEASMPEDSTRAMAGGSIS 87

Query: 205 PKVVSPSFKA*HTVWKATRWV-AKQPAQAEVSQE 107
           PK+V+       T  K  RW  A+  AQA  S +
Sbjct: 88  PKLVNAKQNTKSTERKTARWAFARSEAQAFASYD 121


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