BLASTX nr result

ID: Ophiopogon27_contig00046350 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00046350
         (420 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX76846.1| hypothetical protein RirG_029300 [Rhizophagus irr...    85   2e-16
gb|PKC64552.1| hypothetical protein RhiirA1_421474 [Rhizophagus ...    82   1e-15

>gb|EXX76846.1| hypothetical protein RirG_029300 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC43497.1| hypothetical protein RIR_2649700 [Rhizophagus irregularis DAOM
           181602]
          Length = 548

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 54/118 (45%), Positives = 69/118 (58%), Gaps = 3/118 (2%)
 Frame = -2

Query: 416 YRTMSFDNN-SNGRISPLYGFPLTPSSSPPKTN--DGYFGFNSYSKPXXXXXXXXXXXXX 246
           +R MS DNN SNG+ +    +PLTPS+SPP+TN  DGYF F SY+               
Sbjct: 440 HRAMSSDNNVSNGKFN---SYPLTPSNSPPRTNNNDGYFSFCSYTNSSSANNNIRANNNE 496

Query: 245 XXXXNTLSPTIFTTPSPGYCRAPLYSTPVDEREEDSLFADEYFSNLNDKKKDYYTSYS 72
                 L+P+        Y RAPLY+TPVDEREED LFAD+  +N ND  ++Y+T YS
Sbjct: 497 SNYYKPLTPS-------SYFRAPLYTTPVDEREEDFLFADK-LNNKND-YENYFTDYS 545


>gb|PKC64552.1| hypothetical protein RhiirA1_421474 [Rhizophagus irregularis]
          Length = 526

 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 53/118 (44%), Positives = 68/118 (57%), Gaps = 3/118 (2%)
 Frame = -2

Query: 416 YRTMSFDNN-SNGRISPLYGFPLTPSSSPPKTN--DGYFGFNSYSKPXXXXXXXXXXXXX 246
           +R MS DNN SNG+ +    +PLTPS+SPP+TN  DGYF F SY+               
Sbjct: 418 HRAMSSDNNVSNGKFN---SYPLTPSNSPPRTNNNDGYFSFCSYTNSSSANNNIRANNNE 474

Query: 245 XXXXNTLSPTIFTTPSPGYCRAPLYSTPVDEREEDSLFADEYFSNLNDKKKDYYTSYS 72
                 L+P+        Y RAPLY+TPVDEREED LFAD+  +N ND  ++Y+  YS
Sbjct: 475 SNYYKPLTPS-------SYFRAPLYTTPVDEREEDFLFADK-LNNKND-YENYFIDYS 523


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