BLASTX nr result

ID: Ophiopogon27_contig00046151 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00046151
         (379 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC49273.1| hypothetical protein RIR_3119100 [Rhizophagus ir...   101   2e-25

>dbj|GBC49273.1| hypothetical protein RIR_3119100 [Rhizophagus irregularis DAOM
           181602]
 gb|PKB94685.1| hypothetical protein RhiirA5_368165 [Rhizophagus irregularis]
 gb|PKC53236.1| hypothetical protein RhiirA1_430132 [Rhizophagus irregularis]
 gb|PKK66243.1| hypothetical protein RhiirC2_753757 [Rhizophagus irregularis]
 gb|PKY29627.1| hypothetical protein RhiirB3_418145 [Rhizophagus irregularis]
 gb|POG75545.1| hypothetical protein GLOIN_2v1872703 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 104

 Score =  101 bits (252), Expect = 2e-25
 Identities = 57/102 (55%), Positives = 65/102 (63%), Gaps = 4/102 (3%)
 Frame = +1

Query: 85  MPSA-NGNFSTNVPKTMTEFELLVVXXXXXXXXXXXXXXXXX---LRTKRINCTRTAGTI 252
           MPSA N N  T++PKTM E+E+LV+                    LRTKRINC +T GTI
Sbjct: 1   MPSASNNNIPTSLPKTMREYEVLVIPSSPTSPTGQYHQPQPQQPMLRTKRINCNQTNGTI 60

Query: 253 YWIPDGYRPVLVRTEDLPLLVGTEYNASPTEYNNLPSPSNSS 378
           +WIPDGYRPVLVRT DLPLLVG EY        NLPSPSNS+
Sbjct: 61  FWIPDGYRPVLVRTSDLPLLVGAEY--------NLPSPSNST 94


Top