BLASTX nr result

ID: Ophiopogon27_contig00045890 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00045890
         (411 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX77893.1| hypothetical protein RirG_019620 [Rhizophagus irr...    69   7e-12
gb|PKK76591.1| hypothetical protein RhiirC2_733887 [Rhizophagus ...    65   4e-10

>gb|EXX77893.1| hypothetical protein RirG_019620 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC42374.1| Mitochondrial 54S ribosomal protein YmL24/YmL14 [Rhizophagus
           irregularis DAOM 181602]
          Length = 185

 Score = 69.3 bits (168), Expect = 7e-12
 Identities = 37/75 (49%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
 Frame = +2

Query: 188 MHSTLCLLAKKHV-KHVKRGLLGGIRGKYMYXXXXXXXXXXXXXXXXXXXXXXITVPWKT 364
           MHSTLCL AKK + +H++RGLLGG R KY Y                       TVPW T
Sbjct: 1   MHSTLCLFAKKQLTQHLRRGLLGGTRAKYFYPIKEPKLTLPSPPKLKTEKVKE-TVPWNT 59

Query: 365 HTTYKQSLEGLYGGK 409
             TYKQ+L+GLYGGK
Sbjct: 60  QATYKQALKGLYGGK 74


>gb|PKK76591.1| hypothetical protein RhiirC2_733887 [Rhizophagus irregularis]
          Length = 185

 Score = 64.7 bits (156), Expect = 4e-10
 Identities = 36/75 (48%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
 Frame = +2

Query: 188 MHSTLCLLAKKHV-KHVKRGLLGGIRGKYMYXXXXXXXXXXXXXXXXXXXXXXITVPWKT 364
           MHSTL L AKK + +H++RGLLGG R KY Y                       TVPW T
Sbjct: 1   MHSTLYLFAKKQLTQHLRRGLLGGTRAKYFYPIKEPKLTLPSPPKLKTEKVKE-TVPWNT 59

Query: 365 HTTYKQSLEGLYGGK 409
             TYKQ+L+GLYGGK
Sbjct: 60  QPTYKQALKGLYGGK 74


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