BLASTX nr result

ID: Ophiopogon27_contig00045851 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00045851
         (544 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC43863.1| hypothetical protein RIR_2677600 [Rhizophagus ir...    89   6e-20

>dbj|GBC43863.1| hypothetical protein RIR_2677600 [Rhizophagus irregularis DAOM
           181602]
          Length = 85

 Score = 89.0 bits (219), Expect = 6e-20
 Identities = 43/58 (74%), Positives = 48/58 (82%)
 Frame = -1

Query: 301 KDHSNRITRCGDINDQS*KLKINLLNVFIRHLVIRFL*FWVHWIDLDFLFRMNINSFV 128
           KDHS+ I  CGDINDQ  K KIN+L+VFIR LVI  L FW+HWIDLDFLFRM+INSFV
Sbjct: 28  KDHSDWIITCGDINDQIQKWKINVLDVFIRQLVICTLRFWIHWIDLDFLFRMDINSFV 85


Top