BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00045835
         (700 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAL00210.1| RNA polymerase II large subunit, partial [Rhizop...   471   e-164
emb|CAL00203.1| RNA polymerase II large subunit, partial [Rhizop...   471   e-164
emb|CAL00208.1| RNA polymerase II large subunit, partial [Rhizop...   471   e-164
emb|CAL00209.1| RNA polymerase II large subunit, partial [Rhizop...   469   e-163
emb|CAL00211.1| RNA polymerase II large subunit, partial [Rhizop...   468   e-163
gb|ABC02858.1| RNA polymerase II largest subunit, partial [Rhizo...   471   e-163
emb|CAL00204.1| RNA polymerase II large subunit, partial [Funnel...   449   e-155
gb|ABC02847.1| RNA polymerase II largest subunit, partial [Funne...   450   e-154
gb|PKY37962.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz...   471   e-151
gb|PKY17591.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz...   471   e-151
gb|PKK78623.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz...   471   e-151
gb|PKC14123.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz...   471   e-151
dbj|GBC35266.1| DNA-directed RNA polymerase II subunit RPB1 [Rhi...   471   e-151
gb|ABM26996.1| RNA polymerase II largest subunit, partial [Funne...   449   e-148
gb|ABC02857.1| RNA polymerase II largest subunit, partial [Parag...   411   e-136
gb|ABC02859.1| RNA polymerase II largest subunit, partial [Denti...   403   e-135
gb|ABM26997.1| RNA polymerase II largest subunit, partial [Gigas...   404   e-131
emb|CAJ75797.1| RNA polymerase I subunit B, partial [Geosiphon p...   387   e-128
gb|AEV21778.1| RPB1, partial [Umbelopsis longicollis]                 373   e-125
gb|AEX16067.1| RPB1, partial [Umbelopsis ramanniana]                  370   e-124

>emb|CAL00210.1| RNA polymerase II large subunit, partial [Rhizophagus proliferus]
          Length = 478

 Score =  471 bits (1211), Expect = e-164
 Identities = 230/233 (98%), Positives = 232/233 (99%)
 Frame = -2

Query: 699 ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
           ETKAEI+EICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD
Sbjct: 243 ETKAEIKEICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 302

Query: 519 WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
           WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED
Sbjct: 303 WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 362

Query: 339 GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
           GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT
Sbjct: 363 GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 422

Query: 159 IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
           IADKDTMESITQTINSAKERVAEVII+AQQN LECQPGMTIRESFENKVNKEL
Sbjct: 423 IADKDTMESITQTINSAKERVAEVIISAQQNNLECQPGMTIRESFENKVNKEL 475


>emb|CAL00203.1| RNA polymerase II large subunit, partial [Rhizophagus intraradices]
          Length = 487

 Score =  471 bits (1211), Expect = e-164
 Identities = 230/233 (98%), Positives = 231/233 (99%)
 Frame = -2

Query: 699 ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
           ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNI+MWVKD
Sbjct: 252 ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNIIMWVKD 311

Query: 519 WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
           WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED
Sbjct: 312 WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 371

Query: 339 GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
           GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT
Sbjct: 372 GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 431

Query: 159 IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
           IADKDTMESITQTINSAKERVAEVII AQQN LECQPGMTIRESFENKVNKEL
Sbjct: 432 IADKDTMESITQTINSAKERVAEVIIAAQQNNLECQPGMTIRESFENKVNKEL 484


>emb|CAL00208.1| RNA polymerase II large subunit, partial [Rhizophagus proliferus]
          Length = 498

 Score =  471 bits (1211), Expect = e-164
 Identities = 230/233 (98%), Positives = 232/233 (99%)
 Frame = -2

Query: 699 ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
           ETKAEI+EICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD
Sbjct: 252 ETKAEIKEICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 311

Query: 519 WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
           WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED
Sbjct: 312 WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 371

Query: 339 GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
           GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT
Sbjct: 372 GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 431

Query: 159 IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
           IADKDTMESITQTINSAKERVAEVII+AQQN LECQPGMTIRESFENKVNKEL
Sbjct: 432 IADKDTMESITQTINSAKERVAEVIISAQQNNLECQPGMTIRESFENKVNKEL 484


>emb|CAL00209.1| RNA polymerase II large subunit, partial [Rhizophagus proliferus]
          Length = 477

 Score =  469 bits (1206), Expect = e-163
 Identities = 229/233 (98%), Positives = 231/233 (99%)
 Frame = -2

Query: 699 ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
           ETKAEI+EICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD
Sbjct: 243 ETKAEIKEICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 302

Query: 519 WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
           WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED
Sbjct: 303 WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 362

Query: 339 GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
           GELLCGIICKKTVGTAQQGL HVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT
Sbjct: 363 GELLCGIICKKTVGTAQQGLTHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 422

Query: 159 IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
           IADKDTMESITQTINSAKERVAEVII+AQQN LECQPGMTIRESFENKVNKEL
Sbjct: 423 IADKDTMESITQTINSAKERVAEVIISAQQNNLECQPGMTIRESFENKVNKEL 475


>emb|CAL00211.1| RNA polymerase II large subunit, partial [Rhizophagus proliferus]
          Length = 478

 Score =  468 bits (1205), Expect = e-163
 Identities = 229/233 (98%), Positives = 231/233 (99%)
 Frame = -2

Query: 699 ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
           ETKAEI+EIC VPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD
Sbjct: 243 ETKAEIKEICTVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 302

Query: 519 WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
           WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED
Sbjct: 303 WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 362

Query: 339 GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
           GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT
Sbjct: 363 GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 422

Query: 159 IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
           IADKDTMESITQTINSAKERVAEVII+AQQN LECQPGMTIRESFENKVNKEL
Sbjct: 423 IADKDTMESITQTINSAKERVAEVIISAQQNNLECQPGMTIRESFENKVNKEL 475


>gb|ABC02858.1| RNA polymerase II largest subunit, partial [Rhizophagus
           intraradices]
          Length = 585

 Score =  471 bits (1213), Expect = e-163
 Identities = 231/233 (99%), Positives = 231/233 (99%)
 Frame = -2

Query: 699 ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
           ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD
Sbjct: 261 ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 320

Query: 519 WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
           WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED
Sbjct: 321 WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 380

Query: 339 GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
           GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT
Sbjct: 381 GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 440

Query: 159 IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
           IADKDTMESITQTINSAKERVAEVII AQQN LECQPGMTIRESFENKVNKEL
Sbjct: 441 IADKDTMESITQTINSAKERVAEVIIAAQQNNLECQPGMTIRESFENKVNKEL 493


>emb|CAL00204.1| RNA polymerase II large subunit, partial [Funneliformis mosseae]
          Length = 496

 Score =  449 bits (1156), Expect = e-155
 Identities = 218/233 (93%), Positives = 226/233 (96%)
 Frame = -2

Query: 699 ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
           ETKAEI+EICMVPKQIVSPQSNKPVMGIVQDTLC IRKFTKRD FLSKDLV NILMWVKD
Sbjct: 252 ETKAEIKEICMVPKQIVSPQSNKPVMGIVQDTLCAIRKFTKRDCFLSKDLVTNILMWVKD 311

Query: 519 WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
           WDGKIP PCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGE TD+SPGDTKVLIED
Sbjct: 312 WDGKIPIPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGENTDMSPGDTKVLIED 371

Query: 339 GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
           GELLCGI+CKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT
Sbjct: 372 GELLCGIVCKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 431

Query: 159 IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
           IADKDTM+SITQTIN+AKERV EVI++AQQN LECQPGMTIRESFEN+VNKEL
Sbjct: 432 IADKDTMDSITQTINNAKERVKEVILSAQQNKLECQPGMTIRESFENQVNKEL 484


>gb|ABC02847.1| RNA polymerase II largest subunit, partial [Funneliformis mosseae]
          Length = 585

 Score =  450 bits (1157), Expect = e-154
 Identities = 218/233 (93%), Positives = 226/233 (96%)
 Frame = -2

Query: 699 ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
           ETKAEI+EICMVPKQIVSPQSNKPVMGIVQDTLC IRKFTKRD F SKDLVMNILMWVKD
Sbjct: 261 ETKAEIKEICMVPKQIVSPQSNKPVMGIVQDTLCAIRKFTKRDCFXSKDLVMNILMWVKD 320

Query: 519 WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
           WDGKIP PCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGE TD+SPGDTKVLIED
Sbjct: 321 WDGKIPIPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGENTDMSPGDTKVLIED 380

Query: 339 GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
           GELLCGI+CKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT
Sbjct: 381 GELLCGIVCKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 440

Query: 159 IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
           IADKDTM+SITQTIN+AKERV EVI++AQQN LECQPGMTIRESFEN+VNKEL
Sbjct: 441 IADKDTMDSITQTINNAKERVKEVILSAQQNKLECQPGMTIRESFENQVNKEL 493


>gb|PKY37962.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
          Length = 1860

 Score =  471 bits (1213), Expect = e-151
 Identities = 231/233 (99%), Positives = 231/233 (99%)
 Frame = -2

Query: 699  ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
            ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD
Sbjct: 532  ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 591

Query: 519  WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
            WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED
Sbjct: 592  WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 651

Query: 339  GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
            GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT
Sbjct: 652  GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 711

Query: 159  IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
            IADKDTMESITQTINSAKERVAEVII AQQN LECQPGMTIRESFENKVNKEL
Sbjct: 712  IADKDTMESITQTINSAKERVAEVIIAAQQNNLECQPGMTIRESFENKVNKEL 764


>gb|PKY17591.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
          Length = 1861

 Score =  471 bits (1213), Expect = e-151
 Identities = 231/233 (99%), Positives = 231/233 (99%)
 Frame = -2

Query: 699  ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
            ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD
Sbjct: 532  ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 591

Query: 519  WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
            WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED
Sbjct: 592  WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 651

Query: 339  GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
            GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT
Sbjct: 652  GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 711

Query: 159  IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
            IADKDTMESITQTINSAKERVAEVII AQQN LECQPGMTIRESFENKVNKEL
Sbjct: 712  IADKDTMESITQTINSAKERVAEVIIAAQQNNLECQPGMTIRESFENKVNKEL 764


>gb|PKK78623.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
          Length = 1861

 Score =  471 bits (1213), Expect = e-151
 Identities = 231/233 (99%), Positives = 231/233 (99%)
 Frame = -2

Query: 699  ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
            ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD
Sbjct: 532  ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 591

Query: 519  WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
            WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED
Sbjct: 592  WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 651

Query: 339  GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
            GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT
Sbjct: 652  GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 711

Query: 159  IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
            IADKDTMESITQTINSAKERVAEVII AQQN LECQPGMTIRESFENKVNKEL
Sbjct: 712  IADKDTMESITQTINSAKERVAEVIIAAQQNNLECQPGMTIRESFENKVNKEL 764


>gb|PKC14123.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
          Length = 1861

 Score =  471 bits (1213), Expect = e-151
 Identities = 231/233 (99%), Positives = 231/233 (99%)
 Frame = -2

Query: 699  ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
            ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD
Sbjct: 532  ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 591

Query: 519  WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
            WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED
Sbjct: 592  WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 651

Query: 339  GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
            GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT
Sbjct: 652  GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 711

Query: 159  IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
            IADKDTMESITQTINSAKERVAEVII AQQN LECQPGMTIRESFENKVNKEL
Sbjct: 712  IADKDTMESITQTINSAKERVAEVIIAAQQNNLECQPGMTIRESFENKVNKEL 764


>dbj|GBC35266.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis
            DAOM 181602]
 gb|PKC73289.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
 gb|POG69694.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis
            DAOM 181602=DAOM 197198]
          Length = 1861

 Score =  471 bits (1213), Expect = e-151
 Identities = 231/233 (99%), Positives = 231/233 (99%)
 Frame = -2

Query: 699  ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
            ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD
Sbjct: 532  ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 591

Query: 519  WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
            WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED
Sbjct: 592  WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 651

Query: 339  GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
            GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT
Sbjct: 652  GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 711

Query: 159  IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
            IADKDTMESITQTINSAKERVAEVII AQQN LECQPGMTIRESFENKVNKEL
Sbjct: 712  IADKDTMESITQTINSAKERVAEVIIAAQQNNLECQPGMTIRESFENKVNKEL 764


>gb|ABM26996.1| RNA polymerase II largest subunit, partial [Funneliformis mosseae]
          Length = 1054

 Score =  449 bits (1155), Expect = e-148
 Identities = 218/233 (93%), Positives = 226/233 (96%)
 Frame = -2

Query: 699  ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
            ETKAEI+EICMVPKQIVSPQSNKPVMGIVQDTLC IRKFTKRD FLSKDLVMNILMWVKD
Sbjct: 447  ETKAEIKEICMVPKQIVSPQSNKPVMGIVQDTLCAIRKFTKRDCFLSKDLVMNILMWVKD 506

Query: 519  WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
            WDGKIP PCILKPIPLWTGKQILSMIIPKGINS NLRHSTHPDGE TD+SPGDTKVLIED
Sbjct: 507  WDGKIPIPCILKPIPLWTGKQILSMIIPKGINSXNLRHSTHPDGENTDMSPGDTKVLIED 566

Query: 339  GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
            GELLCGI+CKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT
Sbjct: 567  GELLCGIVCKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 626

Query: 159  IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
            IADKDTM+SITQTIN+AKERV EVI++AQQN LECQPGMTIRESFEN+VNKEL
Sbjct: 627  IADKDTMDSITQTINNAKERVKEVILSAQQNKLECQPGMTIRESFENQVNKEL 679


>gb|ABC02857.1| RNA polymerase II largest subunit, partial [Paraglomus occultum]
          Length = 847

 Score =  411 bits (1056), Expect = e-136
 Identities = 198/233 (84%), Positives = 215/233 (92%)
 Frame = -2

Query: 699 ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
           ETKAEI EICMVPKQIVSPQSNKPVMGIVQDTLC IRKFTKRD FL++DLVMNILMWV D
Sbjct: 261 ETKAEIMEICMVPKQIVSPQSNKPVMGIVQDTLCAIRKFTKRDCFLTRDLVMNILMWVPD 320

Query: 519 WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
           WDG IP PCILKP+P+WTGKQILS+IIPKG+NSDNLRHSTHPD E +DISPGDTKVLIED
Sbjct: 321 WDGHIPIPCILKPVPMWTGKQILSIIIPKGVNSDNLRHSTHPDNETSDISPGDTKVLIED 380

Query: 339 GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
           GELL GI+CKKTVGT+QQGLIHVIMQELGP  AK+FLNGCQ VVNYWLLQNGFSIGIGDT
Sbjct: 381 GELLSGIVCKKTVGTSQQGLIHVIMQELGPEAAKNFLNGCQGVVNYWLLQNGFSIGIGDT 440

Query: 159 IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
           IADKDT+ESI QTI++AK RV E+II AQQ+ LE QPGMTIR++FENKVNKEL
Sbjct: 441 IADKDTIESIAQTISNAKSRVQEIIIQAQQDKLEPQPGMTIRKTFENKVNKEL 493


>gb|ABC02859.1| RNA polymerase II largest subunit, partial [Dentiscutata
           heterogama]
          Length = 639

 Score =  403 bits (1035), Expect = e-135
 Identities = 191/233 (81%), Positives = 212/233 (90%)
 Frame = -2

Query: 699 ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
           ETKAEI EICMVPKQ+VSPQSNKPVMGIVQDTLC +RKFTKRD FL+KDLVMNILMWV D
Sbjct: 262 ETKAEISEICMVPKQVVSPQSNKPVMGIVQDTLCAVRKFTKRDCFLTKDLVMNILMWVLD 321

Query: 519 WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
           WDG++P PCILKPIPLWTGKQILSMIIPKGINSDNLRHS HP+ E +DISPGDTKVLIED
Sbjct: 322 WDGRLPIPCILKPIPLWTGKQILSMIIPKGINSDNLRHSGHPENEHSDISPGDTKVLIED 381

Query: 339 GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
           GELLCGI+CKKTVG   QGL+HVIM ELG  +AKDFLNGCQAVVN WLLQNGFSIGIGDT
Sbjct: 382 GELLCGIVCKKTVGATHQGLVHVIMNELGAEKAKDFLNGCQAVVNQWLLQNGFSIGIGDT 441

Query: 159 IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
           IAD +TM++IT TI++AK+RVAE+I  AQQ+ LEC PGMTIRE+FE++VNKEL
Sbjct: 442 IADDETMKNITNTISNAKQRVAEIIAEAQQDKLECAPGMTIRETFEHRVNKEL 494


>gb|ABM26997.1| RNA polymerase II largest subunit, partial [Gigaspora gigantea]
          Length = 1039

 Score =  404 bits (1039), Expect = e-131
 Identities = 192/233 (82%), Positives = 212/233 (90%)
 Frame = -2

Query: 699  ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
            ETKAEI EICMVPKQ+VSPQSNKPVMGIVQDTLC +RKFTKRD FL+KDLVMNILMWV D
Sbjct: 441  ETKAEISEICMVPKQVVSPQSNKPVMGIVQDTLCAVRKFTKRDCFLTKDLVMNILMWVLD 500

Query: 519  WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
            WDG++P PCILKPIPLWTGKQILSMIIPKGINSDNLRHS HP+ E +DISPGDTKVLIED
Sbjct: 501  WDGRLPIPCILKPIPLWTGKQILSMIIPKGINSDNLRHSGHPENEHSDISPGDTKVLIED 560

Query: 339  GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
            GELLCGI+CKKTVG   QGL+HVIM E+GP +AKDFLNGCQAVVN WLLQNGFSIGIGDT
Sbjct: 561  GELLCGIVCKKTVGATHQGLVHVIMNEMGPEKAKDFLNGCQAVVNQWLLQNGFSIGIGDT 620

Query: 159  IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
            IAD +TM++IT TI++AK RVAE+I  AQQ+ LEC PGMTIRE+FE+KVNKEL
Sbjct: 621  IADDETMKNITNTISNAKSRVAEIIGEAQQDKLECAPGMTIRETFEHKVNKEL 673


>emb|CAJ75797.1| RNA polymerase I subunit B, partial [Geosiphon pyriformis]
          Length = 649

 Score =  387 bits (993), Expect = e-128
 Identities = 185/233 (79%), Positives = 209/233 (89%)
 Frame = -2

Query: 699 ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
           ET+AEI EICMVPKQIVSPQSNKPVMGIVQDTLC +RKFTKRD FLS+DLVMNILMWV +
Sbjct: 267 ETRAEITEICMVPKQIVSPQSNKPVMGIVQDTLCAVRKFTKRDCFLSRDLVMNILMWVPE 326

Query: 519 WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
           WDG+IP PCI+KPIP+WTGKQILS+IIPKGIN D   HS HP+ E +DISPGDTKVLIED
Sbjct: 327 WDGRIPRPCIIKPIPMWTGKQILSLIIPKGINCDGF-HSGHPENEKSDISPGDTKVLIED 385

Query: 339 GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
           G++LCGIICKKTVGT+QQGL+HVIMQELG   AK FLNGCQ VVN WLLQ+GFSIGIGDT
Sbjct: 386 GQVLCGIICKKTVGTSQQGLVHVIMQELGSEAAKKFLNGCQTVVNNWLLQHGFSIGIGDT 445

Query: 159 IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
           IADKDTME+ITQTI +AK RV E+I+ AQQ+ L+C+PGMTIRESFE+ VN+EL
Sbjct: 446 IADKDTMETITQTIGAAKSRVQEIILKAQQDNLKCEPGMTIRESFEHHVNREL 498


>gb|AEV21778.1| RPB1, partial [Umbelopsis longicollis]
          Length = 464

 Score =  373 bits (957), Expect = e-125
 Identities = 182/233 (78%), Positives = 203/233 (87%)
 Frame = -2

Query: 699 ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
           ET+AEI EICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRD FLSKDLVMNI+MWV D
Sbjct: 148 ETRAEITEICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDCFLSKDLVMNIVMWVPD 207

Query: 519 WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
           WDG +PTP ILKP P+WTGKQ+LS+IIPKGIN     HSTHPDGE T ISPGDT+VLIE+
Sbjct: 208 WDGYLPTPAILKPKPMWTGKQVLSLIIPKGINCLTF-HSTHPDGESTWISPGDTRVLIEN 266

Query: 339 GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
           G+L+CGI+CKKTVGTA  GLIH IM E GP  AK+FLNG Q V+NYWLLQNGFSIGIGDT
Sbjct: 267 GDLICGIVCKKTVGTAGGGLIHTIMNEQGPEAAKNFLNGAQTVINYWLLQNGFSIGIGDT 326

Query: 159 IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
           IAD+DTME+IT  I+SAK+RV E+I+ AQQ+ LE QPGMTIRESFE KVN+ L
Sbjct: 327 IADRDTMENITNLISSAKDRVQEIILAAQQDKLEVQPGMTIRESFEAKVNQTL 379


>gb|AEX16067.1| RPB1, partial [Umbelopsis ramanniana]
          Length = 463

 Score =  370 bits (949), Expect = e-124
 Identities = 182/233 (78%), Positives = 203/233 (87%)
 Frame = -2

Query: 699 ETKAEIREICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDTFLSKDLVMNILMWVKD 520
           ET+AEI EICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRD FLSKDLVMNI+MWV D
Sbjct: 150 ETRAEITEICMVPKQIVSPQSNKPVMGIVQDTLCGIRKFTKRDCFLSKDLVMNIVMWVPD 209

Query: 519 WDGKIPTPCILKPIPLWTGKQILSMIIPKGINSDNLRHSTHPDGEFTDISPGDTKVLIED 340
           WDG +PTP ILKP P+WTGKQI+SMIIPKGIN   + HSTHPDGE T ISPGDT+V+IE+
Sbjct: 210 WDGYLPTPAILKPKPMWTGKQIISMIIPKGINCQTV-HSTHPDGETTWISPGDTRVVIEN 268

Query: 339 GELLCGIICKKTVGTAQQGLIHVIMQELGPNRAKDFLNGCQAVVNYWLLQNGFSIGIGDT 160
           G+L+ GI+CKKTVGTA  GLIH I+ E G   AK+FLNG Q VVNYWLLQNGFSIGIGDT
Sbjct: 269 GDLISGIVCKKTVGTAGGGLIHTILNEQGSEAAKNFLNGAQTVVNYWLLQNGFSIGIGDT 328

Query: 159 IADKDTMESITQTINSAKERVAEVIITAQQNTLECQPGMTIRESFENKVNKEL 1
           IAD+DTMESIT  I+SAK+RV E+I+TAQQ+ LE QPGMTIRESFE KVN+ L
Sbjct: 329 IADRDTMESITSLISSAKDRVQEIILTAQQDKLEVQPGMTIRESFEAKVNQTL 381