BLASTX nr result

ID: Ophiopogon27_contig00045830 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00045830
         (389 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKK56495.1| hypothetical protein RhiirC2_872019, partial [Rhi...    42   1e-07

>gb|PKK56495.1| hypothetical protein RhiirC2_872019, partial [Rhizophagus
           irregularis]
          Length = 202

 Score = 42.4 bits (98), Expect(3) = 1e-07
 Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 21/67 (31%)
 Frame = -1

Query: 290 STNVNIQLSTLKVMSNAATHQENEL---------------------KRQSDNYLERGNQN 174
           +TN++IQLSTL+VMS +AT QE+EL                     KRQSD Y ER  Q 
Sbjct: 102 NTNIDIQLSTLRVMSTSATCQEDELAGQMVASSISGKKNVKHNKNAKRQSDEYPEREKQK 161

Query: 173 HVKLALK 153
             K +++
Sbjct: 162 SRKTSIE 168



 Score = 35.0 bits (79), Expect(3) = 1e-07
 Identities = 16/22 (72%), Positives = 17/22 (77%)
 Frame = -2

Query: 118 KLNNALVAQEDFDENGEEEVIQ 53
           +LNN L  QE FDEN EEEVIQ
Sbjct: 178 RLNNVLNVQESFDENDEEEVIQ 199



 Score = 25.0 bits (53), Expect(3) = 1e-07
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = -3

Query: 165 TSIENSHQAESS 130
           TSIENSHQAE S
Sbjct: 165 TSIENSHQAECS 176


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