BLASTX nr result

ID: Ophiopogon27_contig00045780 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00045780
         (363 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY43338.1| WD40 repeat-like protein [Rhizophagus irregularis]      64   2e-09
gb|EXX56571.1| dynein intermediate chain [Rhizophagus irregulari...    64   2e-09

>gb|PKY43338.1| WD40 repeat-like protein [Rhizophagus irregularis]
          Length = 634

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 30/32 (93%), Positives = 30/32 (93%)
 Frame = +3

Query: 267 RFIPNFATFEAVILDIPPKEIVFYNKEVQTKD 362
           RFIPNF TFEAVILDIPPKEIV YNKEVQTKD
Sbjct: 111 RFIPNFITFEAVILDIPPKEIVHYNKEVQTKD 142


>gb|EXX56571.1| dynein intermediate chain [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC38438.1| Dynein intermediate chain [Rhizophagus irregularis DAOM 181602]
 gb|PKC09517.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|PKC65446.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|PKK69342.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|PKY21679.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|POG60388.1| dynein intermediate chain [Rhizophagus irregularis DAOM 181602=DAOM
           197198]
          Length = 634

 Score = 63.9 bits (154), Expect = 2e-09
 Identities = 30/32 (93%), Positives = 30/32 (93%)
 Frame = +3

Query: 267 RFIPNFATFEAVILDIPPKEIVFYNKEVQTKD 362
           RFIPNF TFEAVILDIPPKEIV YNKEVQTKD
Sbjct: 111 RFIPNFITFEAVILDIPPKEIVHYNKEVQTKD 142


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