BLASTX nr result

ID: Ophiopogon27_contig00045260 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00045260
         (391 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX60473.1| hypothetical protein RirG_179580 [Rhizophagus irr...   168   9e-52
gb|PKC74234.1| hypothetical protein RhiirA1_409483, partial [Rhi...   142   1e-41

>gb|EXX60473.1| hypothetical protein RirG_179580 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC37791.1| hypothetical protein RIR_2185500 [Rhizophagus irregularis DAOM
           181602]
 gb|PKC14736.1| hypothetical protein RhiirA5_409095 [Rhizophagus irregularis]
 gb|PKK68980.1| hypothetical protein RhiirC2_781573 [Rhizophagus irregularis]
 gb|PKY55681.1| hypothetical protein RhiirA4_475315 [Rhizophagus irregularis]
 gb|POG58729.1| hypothetical protein GLOIN_2v1789979 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 100

 Score =  168 bits (425), Expect = 9e-52
 Identities = 85/100 (85%), Positives = 87/100 (87%), Gaps = 6/100 (6%)
 Frame = +1

Query: 34  MSRKEQWATTTKDDSIIVNSLFENIVLFFMTVFVLLCGSDNSNDSSTPHEIQIX------ 195
           MSR EQ    TKDDSIIVNSLFENIVLFFMTVFVLLCGSDN+N+SST HEIQI       
Sbjct: 1   MSRNEQSWAATKDDSIIVNSLFENIVLFFMTVFVLLCGSDNNNNSSTQHEIQIHHFFLPQ 60

Query: 196 QHKALYNILKNYSSKQDSHQPHGIMNHNHHGRKNPSIAAN 315
           QHKALYNILKNYSSKQDSHQPHGIMNHNHHGRKNPSIAAN
Sbjct: 61  QHKALYNILKNYSSKQDSHQPHGIMNHNHHGRKNPSIAAN 100


>gb|PKC74234.1| hypothetical protein RhiirA1_409483, partial [Rhizophagus
           irregularis]
 gb|PKY15586.1| hypothetical protein RhiirB3_401819, partial [Rhizophagus
           irregularis]
          Length = 88

 Score =  142 bits (358), Expect = 1e-41
 Identities = 73/88 (82%), Positives = 75/88 (85%), Gaps = 6/88 (6%)
 Frame = +1

Query: 34  MSRKEQWATTTKDDSIIVNSLFENIVLFFMTVFVLLCGSDNSNDSSTPHEIQI------X 195
           MSR EQ    TKDDSIIVNSLFENIVLFFMTVFVLLCGSDN+N+SST HEIQI       
Sbjct: 1   MSRNEQSWAATKDDSIIVNSLFENIVLFFMTVFVLLCGSDNNNNSSTQHEIQIHHFFLPQ 60

Query: 196 QHKALYNILKNYSSKQDSHQPHGIMNHN 279
           QHKALYNILKNYSSKQDSHQPHGIMNHN
Sbjct: 61  QHKALYNILKNYSSKQDSHQPHGIMNHN 88


Top