BLASTX nr result

ID: Ophiopogon27_contig00045210 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00045210
         (784 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY40453.1| WD40 repeat-like protein [Rhizophagus irregularis]      61   5e-07
dbj|GBC37821.1| putative Prolactin regulatory element-binding pr...    61   5e-07
gb|PKC13842.1| WD40 repeat-like protein [Rhizophagus irregularis...    61   6e-07

>gb|PKY40453.1| WD40 repeat-like protein [Rhizophagus irregularis]
          Length = 317

 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 31/55 (56%), Positives = 37/55 (67%)
 Frame = -1

Query: 784 IAFSHDSTLIVSGSADNSVHIISLPEKFNTGETKXXXXXXXXIGALVAMFYQLYL 620
           IAFSHDSTL VSGSADN+VHI+ LPE FN G  +        + A +A+FYQ  L
Sbjct: 261 IAFSHDSTLFVSGSADNTVHILQLPENFNPGIFQLVLILIGILIAFIAVFYQFNL 315


>dbj|GBC37821.1| putative Prolactin regulatory element-binding protein [Rhizophagus
           irregularis DAOM 181602]
          Length = 363

 Score = 60.8 bits (146), Expect = 5e-07
 Identities = 31/55 (56%), Positives = 37/55 (67%)
 Frame = -1

Query: 784 IAFSHDSTLIVSGSADNSVHIISLPEKFNTGETKXXXXXXXXIGALVAMFYQLYL 620
           IAFSHDSTL VSGSADN+VHI+ LPE FN G  +        + A +A+FYQ  L
Sbjct: 307 IAFSHDSTLFVSGSADNTVHILQLPENFNPGIFQLVLILIGILIAFIAVFYQFNL 361


>gb|PKC13842.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|PKC67469.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|PKY12871.1| WD40 repeat-like protein [Rhizophagus irregularis]
          Length = 393

 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 31/55 (56%), Positives = 37/55 (67%)
 Frame = -1

Query: 784 IAFSHDSTLIVSGSADNSVHIISLPEKFNTGETKXXXXXXXXIGALVAMFYQLYL 620
           IAFSHDSTL VSGSADN+VHI+ LPE FN G  +        + A +A+FYQ  L
Sbjct: 337 IAFSHDSTLFVSGSADNTVHILQLPENFNPGIFQLVLILIGILIAFIAVFYQFNL 391


Top