BLASTX nr result

ID: Ophiopogon27_contig00045189 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00045189
         (644 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX78323.1| hypothetical protein RirG_016020 [Rhizophagus irr...    79   3e-18
dbj|GBC53879.1| hypothetical protein RIR_3498100 [Rhizophagus ir...    46   6e-08

>gb|EXX78323.1| hypothetical protein RirG_016020 [Rhizophagus irregularis DAOM
           197198w]
 gb|POG59487.1| hypothetical protein GLOIN_2v1721672 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 230

 Score = 79.0 bits (193), Expect(2) = 3e-18
 Identities = 47/119 (39%), Positives = 60/119 (50%), Gaps = 19/119 (15%)
 Frame = -2

Query: 499 SHFCFCIGLRTGVIISSILWMIEGFVLSTLLISHRI-------------------VLPEN 377
           SHFCFC+GLR GVIISS+LWMIEG +LSTL I+  +                    +   
Sbjct: 13  SHFCFCLGLRPGVIISSVLWMIEGVILSTLFITSSMKNYKKNKDDIGEVVTSLYYYVAIL 72

Query: 376 XXXXXXXXXXXXXXXXXXXXXXLVYKSAQSLRMYSYISWFFAVFINSVLVIITYINIVI 200
                                 L+YKS   LR+YSY SWFFAVFI  VL I++ + I++
Sbjct: 73  TKTLSVYFIILFLISIIGLASLLIYKSTPLLRVYSYTSWFFAVFIYFVLAIVSIVAIMV 131



 Score = 41.2 bits (95), Expect(2) = 3e-18
 Identities = 25/60 (41%), Positives = 30/60 (50%), Gaps = 16/60 (26%)
 Frame = -1

Query: 149 FFQISLHLYFSIILRAYI----------------KVKNSKHSLNNHGVFNIKVDKTFDVR 18
           FFQ S+H+YFSIIL+ Y+                K  N   S     VF IKVDKT+D R
Sbjct: 167 FFQGSIHVYFSIILQTYVERCEQLEKKKRREASSKRNNLLSSSGTSNVFKIKVDKTYDDR 226


>dbj|GBC53879.1| hypothetical protein RIR_3498100 [Rhizophagus irregularis DAOM
           181602]
          Length = 199

 Score = 46.2 bits (108), Expect(2) = 6e-08
 Identities = 20/36 (55%), Positives = 27/36 (75%)
 Frame = -2

Query: 307 VYKSAQSLRMYSYISWFFAVFINSVLVIITYINIVI 200
           +YKS   LR+YSY SWFFAVFI  VL I++ + I++
Sbjct: 64  IYKSTPLLRVYSYTSWFFAVFIYFVLAIVSIVAIMV 99



 Score = 38.9 bits (89), Expect(2) = 6e-08
 Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 16/59 (27%)
 Frame = -1

Query: 149 FFQISLHLYFSIILRAYI----------------KVKNSKHSLNNHGVFNIKVDKTFDV 21
           FFQ S+H+YFSIIL+ Y+                K  N   S     VF IKVDKT+++
Sbjct: 135 FFQGSIHVYFSIILQTYVERCEQLEKKKRREASSKRNNLLSSSGTSNVFKIKVDKTYNL 193


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