BLASTX nr result

ID: Ophiopogon27_contig00044597 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00044597
         (534 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY31529.1| hypothetical protein RhiirB3_92399 [Rhizophagus i...   308   e-104
gb|EXX69317.1| CCR4-NOT core ubiquitin-protein ligase subunit MO...   308   3e-94
gb|PKC18065.1| hypothetical protein RhiirA5_345448 [Rhizophagus ...   280   3e-93
dbj|GBC37745.1| CCR4-NOT transcription complex subunit 4 [Rhizop...   193   9e-54

>gb|PKY31529.1| hypothetical protein RhiirB3_92399 [Rhizophagus irregularis]
          Length = 263

 Score =  308 bits (788), Expect = e-104
 Identities = 150/177 (84%), Positives = 150/177 (84%)
 Frame = +3

Query: 3   VNISFGPSDVHQESMWNTSNDSTFGPLRRTLFTTPPGVPITSTLNQTHSLHNTNASVGLD 182
           VNISFGPSDVHQESMWNTSNDSTFGPLRR LFTTPPGVPITSTLNQTHSLHNTNASVGLD
Sbjct: 15  VNISFGPSDVHQESMWNTSNDSTFGPLRRPLFTTPPGVPITSTLNQTHSLHNTNASVGLD 74

Query: 183 SLYHQNMLIHQXXXXXXXXXXXXXXXXXXXXXXXXXXRMDFNMTSGWNPQNVPWNTEEDF 362
           SLYHQNMLIHQ                          RMDFNMTSGWNPQNVPWNTEEDF
Sbjct: 75  SLYHQNMLIHQPIIPTTSTPTIKSPPPGIYTPTPPTPRMDFNMTSGWNPQNVPWNTEEDF 134

Query: 363 IPRHPSHQNQQGSSRSRDEAQDFFGAWLKAAAASSNTQDDIPNEAEPLPNILQDPAI 533
           IPRHPSHQNQQGSSRSRDEAQDFFGAWLKAAAASSNTQDDIPNEAEPLPNILQDPAI
Sbjct: 135 IPRHPSHQNQQGSSRSRDEAQDFFGAWLKAAAASSNTQDDIPNEAEPLPNILQDPAI 191


>gb|EXX69317.1| CCR4-NOT core ubiquitin-protein ligase subunit MOT2 [Rhizophagus
            irregularis DAOM 197198w]
          Length = 1335

 Score =  308 bits (788), Expect = 3e-94
 Identities = 150/177 (84%), Positives = 150/177 (84%)
 Frame = +3

Query: 3    VNISFGPSDVHQESMWNTSNDSTFGPLRRTLFTTPPGVPITSTLNQTHSLHNTNASVGLD 182
            VNISFGPSDVHQESMWNTSNDSTFGPLRR LFTTPPGVPITSTLNQTHSLHNTNASVGLD
Sbjct: 660  VNISFGPSDVHQESMWNTSNDSTFGPLRRPLFTTPPGVPITSTLNQTHSLHNTNASVGLD 719

Query: 183  SLYHQNMLIHQXXXXXXXXXXXXXXXXXXXXXXXXXXRMDFNMTSGWNPQNVPWNTEEDF 362
            SLYHQNMLIHQ                          RMDFNMTSGWNPQNVPWNTEEDF
Sbjct: 720  SLYHQNMLIHQPIIPTTSTPTIKSPPPGIYTPTPPTPRMDFNMTSGWNPQNVPWNTEEDF 779

Query: 363  IPRHPSHQNQQGSSRSRDEAQDFFGAWLKAAAASSNTQDDIPNEAEPLPNILQDPAI 533
            IPRHPSHQNQQGSSRSRDEAQDFFGAWLKAAAASSNTQDDIPNEAEPLPNILQDPAI
Sbjct: 780  IPRHPSHQNQQGSSRSRDEAQDFFGAWLKAAAASSNTQDDIPNEAEPLPNILQDPAI 836


>gb|PKC18065.1| hypothetical protein RhiirA5_345448 [Rhizophagus irregularis]
          Length = 235

 Score =  280 bits (715), Expect = 3e-93
 Identities = 136/163 (83%), Positives = 136/163 (83%)
 Frame = +3

Query: 45  MWNTSNDSTFGPLRRTLFTTPPGVPITSTLNQTHSLHNTNASVGLDSLYHQNMLIHQXXX 224
           MWNTSNDSTFGPLRR LFTTPPGVPITSTLNQTHSLHNTNASVGLDSLYHQNMLIHQ   
Sbjct: 1   MWNTSNDSTFGPLRRPLFTTPPGVPITSTLNQTHSLHNTNASVGLDSLYHQNMLIHQPII 60

Query: 225 XXXXXXXXXXXXXXXXXXXXXXXRMDFNMTSGWNPQNVPWNTEEDFIPRHPSHQNQQGSS 404
                                  RMDFNMTSGWNPQNVPWNTEEDFIPRHPSHQNQQGSS
Sbjct: 61  PTTSTPTIKSPPPGIYTPTPPTPRMDFNMTSGWNPQNVPWNTEEDFIPRHPSHQNQQGSS 120

Query: 405 RSRDEAQDFFGAWLKAAAASSNTQDDIPNEAEPLPNILQDPAI 533
           RSRDEAQDFFGAWLKAAAASSNTQDDIPNEAEPLPNILQDPAI
Sbjct: 121 RSRDEAQDFFGAWLKAAAASSNTQDDIPNEAEPLPNILQDPAI 163


>dbj|GBC37745.1| CCR4-NOT transcription complex subunit 4 [Rhizophagus irregularis
            DAOM 181602]
          Length = 1270

 Score =  193 bits (491), Expect = 9e-54
 Identities = 96/133 (72%), Positives = 98/133 (73%)
 Frame = +3

Query: 135  NQTHSLHNTNASVGLDSLYHQNMLIHQXXXXXXXXXXXXXXXXXXXXXXXXXXRMDFNMT 314
            N +  L   +   GLDSLYHQNMLIHQ                          RMDFNMT
Sbjct: 639  NSSDPLAMKDLQEGLDSLYHQNMLIHQPIIPTTSTPTIKSPPPGIYTPTPPTPRMDFNMT 698

Query: 315  SGWNPQNVPWNTEEDFIPRHPSHQNQQGSSRSRDEAQDFFGAWLKAAAASSNTQDDIPNE 494
            SGWNPQNVPWNTEEDFIPRHPSHQNQQGSSRSRDEAQDFFGAWLKAAAASSNTQDDIPNE
Sbjct: 699  SGWNPQNVPWNTEEDFIPRHPSHQNQQGSSRSRDEAQDFFGAWLKAAAASSNTQDDIPNE 758

Query: 495  AEPLPNILQDPAI 533
            AEPLPNILQDPAI
Sbjct: 759  AEPLPNILQDPAI 771


Top