BLASTX nr result

ID: Ophiopogon27_contig00044340 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00044340
         (358 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC37745.1| CCR4-NOT transcription complex subunit 4 [Rhizop...   152   2e-40
gb|EXX69317.1| CCR4-NOT core ubiquitin-protein ligase subunit MO...   152   2e-40

>dbj|GBC37745.1| CCR4-NOT transcription complex subunit 4 [Rhizophagus irregularis
           DAOM 181602]
          Length = 1270

 Score =  152 bits (385), Expect = 2e-40
 Identities = 78/118 (66%), Positives = 79/118 (66%)
 Frame = -3

Query: 356 VSPPPGVGFRTDFPNSNTNSDYVQPTPTQYTGSFNPFATDDDKFDPFATDNQHPXXXXXX 177
           VSPPPGVGFRTDFPNSNTN DYVQPTPTQYTGSFNPFATDDDKFDPFATDNQHP      
Sbjct: 529 VSPPPGVGFRTDFPNSNTNPDYVQPTPTQYTGSFNPFATDDDKFDPFATDNQHPSNIIGL 588

Query: 176 XXXXXXXXXIAGTYTNDXXXXXXXXXXXXXXXXXXXXXXFALEDGDNAYLNSSDPLAM 3
                    IAGTYTND                      FALEDGDNA+ NSSDPLAM
Sbjct: 589 SSLNNNNNNIAGTYTNDSRSHSSHGQSSSSKSRQSSRFGFALEDGDNAHFNSSDPLAM 646


>gb|EXX69317.1| CCR4-NOT core ubiquitin-protein ligase subunit MOT2 [Rhizophagus
           irregularis DAOM 197198w]
          Length = 1335

 Score =  152 bits (385), Expect = 2e-40
 Identities = 78/118 (66%), Positives = 79/118 (66%)
 Frame = -3

Query: 356 VSPPPGVGFRTDFPNSNTNSDYVQPTPTQYTGSFNPFATDDDKFDPFATDNQHPXXXXXX 177
           VSPPPGVGFRTDFPNSNTN DYVQPTPTQYTGSFNPFATDDDKFDPFATDNQHP      
Sbjct: 529 VSPPPGVGFRTDFPNSNTNPDYVQPTPTQYTGSFNPFATDDDKFDPFATDNQHPSNIIGL 588

Query: 176 XXXXXXXXXIAGTYTNDXXXXXXXXXXXXXXXXXXXXXXFALEDGDNAYLNSSDPLAM 3
                    IAGTYTND                      FALEDGDNA+ NSSDPLAM
Sbjct: 589 SSLNNNNNNIAGTYTNDSRSHSSHGQSSSSKSRQSSRFGFALEDGDNAHFNSSDPLAM 646


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