BLASTX nr result

ID: Ophiopogon27_contig00044339 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00044339
         (731 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC37745.1| CCR4-NOT transcription complex subunit 4 [Rhizop...   362   e-113
gb|EXX69317.1| CCR4-NOT core ubiquitin-protein ligase subunit MO...   362   e-113

>dbj|GBC37745.1| CCR4-NOT transcription complex subunit 4 [Rhizophagus irregularis
            DAOM 181602]
          Length = 1270

 Score =  362 bits (928), Expect = e-113
 Identities = 194/253 (76%), Positives = 203/253 (80%), Gaps = 10/253 (3%)
 Frame = -1

Query: 731  AESSGLKATKKVEPQSVQNSVSASKRKETQIDIEHERPQQLVSEPIQETKLQEQVLPSDS 552
            AESSGLKATKKVEPQ VQNSVSASKRKETQIDIEHE+PQQLVSEPIQETKLQEQVLPSDS
Sbjct: 396  AESSGLKATKKVEPQPVQNSVSASKRKETQIDIEHEKPQQLVSEPIQETKLQEQVLPSDS 455

Query: 551  LTEQSNDKSQQIATKQDNIVADFDQTLSVLSDGSFSFSFNAPLLENSVVSEEKNNDKIST 372
            LTEQSNDK QQIATKQDNIVADFDQTLSVLSDGSFSFSFNAPLLENSVV EEKNNDKIS 
Sbjct: 456  LTEQSNDKFQQIATKQDNIVADFDQTLSVLSDGSFSFSFNAPLLENSVVPEEKNNDKISP 515

Query: 371  TTSNNVMGGGSRIVSPPPGVGFRTDFANSNTNIDYAQSTPTPTLYTGSFNPFATEDDKFD 192
             TS+NV  GGS +VSPPPGVGFRTDF NSNTN DY Q  PTPT YTGSFNPFAT+DDKFD
Sbjct: 516  ITSDNVAVGGSCVVSPPPGVGFRTDFPNSNTNPDYVQ--PTPTQYTGSFNPFATDDDKFD 573

Query: 191  PFSTDNPH----------SXXXXNMADTYTNDXXXXXXXXXXXXXXXXXXXRFGFALEDG 42
            PF+TDN H          +    N+A TYTND                   RFGFALEDG
Sbjct: 574  PFATDNQHPSNIIGLSSLNNNNNNIAGTYTNDSRSHSSHGQSSSSKSRQSSRFGFALEDG 633

Query: 41   DNSHLNASDPLAM 3
            DN+H N+SDPLAM
Sbjct: 634  DNAHFNSSDPLAM 646


>gb|EXX69317.1| CCR4-NOT core ubiquitin-protein ligase subunit MOT2 [Rhizophagus
            irregularis DAOM 197198w]
          Length = 1335

 Score =  362 bits (928), Expect = e-113
 Identities = 194/253 (76%), Positives = 203/253 (80%), Gaps = 10/253 (3%)
 Frame = -1

Query: 731  AESSGLKATKKVEPQSVQNSVSASKRKETQIDIEHERPQQLVSEPIQETKLQEQVLPSDS 552
            AESSGLKATKKVEPQ VQNSVSASKRKETQIDIEHE+PQQLVSEPIQETKLQEQVLPSDS
Sbjct: 396  AESSGLKATKKVEPQPVQNSVSASKRKETQIDIEHEKPQQLVSEPIQETKLQEQVLPSDS 455

Query: 551  LTEQSNDKSQQIATKQDNIVADFDQTLSVLSDGSFSFSFNAPLLENSVVSEEKNNDKIST 372
            LTEQSNDK QQIATKQDNIVADFDQTLSVLSDGSFSFSFNAPLLENSVV EEKNNDKIS 
Sbjct: 456  LTEQSNDKFQQIATKQDNIVADFDQTLSVLSDGSFSFSFNAPLLENSVVPEEKNNDKISP 515

Query: 371  TTSNNVMGGGSRIVSPPPGVGFRTDFANSNTNIDYAQSTPTPTLYTGSFNPFATEDDKFD 192
             TS+NV  GGS +VSPPPGVGFRTDF NSNTN DY Q  PTPT YTGSFNPFAT+DDKFD
Sbjct: 516  ITSDNVAVGGSCVVSPPPGVGFRTDFPNSNTNPDYVQ--PTPTQYTGSFNPFATDDDKFD 573

Query: 191  PFSTDNPH----------SXXXXNMADTYTNDXXXXXXXXXXXXXXXXXXXRFGFALEDG 42
            PF+TDN H          +    N+A TYTND                   RFGFALEDG
Sbjct: 574  PFATDNQHPSNIIGLSSLNNNNNNIAGTYTNDSRSHSSHGQSSSSKSRQSSRFGFALEDG 633

Query: 41   DNSHLNASDPLAM 3
            DN+H N+SDPLAM
Sbjct: 634  DNAHFNSSDPLAM 646


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