BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00044225
         (512 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC12777.1| DNA-directed RNA polymerase II subunit RPB2 [Rhi...   235   3e-78
gb|EXX69835.1| Rpb2p [Rhizophagus irregularis DAOM 197198w] >gi|...   235   3e-78
gb|PKY44798.1| DNA-directed RNA polymerase II subunit RPB2 [Rhiz...   235   3e-78
gb|PKK76623.1| DNA-directed RNA polymerase II subunit RPB2 [Rhiz...   235   3e-78
gb|ABM27011.1| RNA polymerase II second largest subunit, partial...   231   2e-76
gb|ABM27012.1| RNA polymerase II second largest subunit, partial...   231   2e-76
gb|ABM27013.1| RNA polymerase II second largest subunit, partial...   226   2e-74
emb|CDS06523.1| Putative DNA-directed RNA polymerase(Fragment) [...   208   4e-63
dbj|GAN00868.1| DNA-dependent RNA polymerase II second largest s...   206   4e-63
gb|EPB87906.1| DNA-directed RNA polymerase II subunit RPB2 [Muco...   206   4e-63
gb|AEX16088.1| RPB2, partial [Mucor circinelloides f. lusitanicu...   206   4e-63
emb|CEI96996.1| Putative DNA-directed RNA polymerase (Fragment) ...   207   6e-63
gb|OBZ86727.1| DNA-directed RNA polymerase II subunit RPB2 [Choa...   206   6e-63
gb|ORE15691.1| DNA-directed RNA polymerase II subunit RPB2 [Rhiz...   207   6e-63
ref|XP_023463302.1| DNA-dependent RNA polymerase II second large...   207   6e-63
emb|CEG69567.1| Putative DNA-directed RNA polymerase (Fragment) ...   207   6e-63
emb|CEG69568.1| Putative DNA-directed RNA polymerase [Rhizopus m...   207   6e-63
emb|CEP11859.1| hypothetical protein [Parasitella parasitica]         206   6e-63
emb|CEG69569.1| Putative DNA-directed RNA polymerase [Rhizopus m...   207   6e-63
emb|CEG83450.1| Putative DNA-directed RNA polymerase [Rhizopus m...   207   6e-63

>dbj|GBC12777.1| DNA-directed RNA polymerase II subunit RPB2 [Rhizophagus irregularis
            DAOM 181602]
          Length = 1650

 Score =  235 bits (600), Expect(2) = 3e-78
 Identities = 118/135 (87%), Positives = 119/135 (88%)
 Frame = +2

Query: 107  KKRKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSA 286
            +KRKAFFLGYMVH                HYGKKRMDLAGPLLASLFRMLFKKLTKDVSA
Sbjct: 797  EKRKAFFLGYMVHRLLLAALGRRELDDRDHYGKKRMDLAGPLLASLFRMLFKKLTKDVSA 856

Query: 287  YLRKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS 466
            YLRKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS
Sbjct: 857  YLRKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS 916

Query: 467  TLSHLRRCNTPMGRD 511
            TLSHLRRCNTPMGRD
Sbjct: 917  TLSHLRRCNTPMGRD 931



 Score = 84.3 bits (207), Expect(2) = 3e-78
 Identities = 39/42 (92%), Positives = 41/42 (97%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEK+K+ F
Sbjct: 762 RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKRKAFF 803


>gb|EXX69835.1| Rpb2p [Rhizophagus irregularis DAOM 197198w]
 gb|PKC15990.1| DNA-directed RNA polymerase II subunit RPB2 [Rhizophagus
           irregularis]
 gb|PKC73782.1| DNA-directed RNA polymerase II subunit RPB2 [Rhizophagus
           irregularis]
 gb|PKY18013.1| DNA-directed RNA polymerase II subunit RPB2 [Rhizophagus
           irregularis]
 gb|POG79284.1| DNA-directed RNA polymerase II subunit RPB2 [Rhizophagus
           irregularis DAOM 181602=DAOM 197198]
          Length = 1287

 Score =  235 bits (600), Expect(2) = 3e-78
 Identities = 118/135 (87%), Positives = 119/135 (88%)
 Frame = +2

Query: 107 KKRKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSA 286
           +KRKAFFLGYMVH                HYGKKRMDLAGPLLASLFRMLFKKLTKDVSA
Sbjct: 401 EKRKAFFLGYMVHRLLLAALGRRELDDRDHYGKKRMDLAGPLLASLFRMLFKKLTKDVSA 460

Query: 287 YLRKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS 466
           YLRKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS
Sbjct: 461 YLRKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS 520

Query: 467 TLSHLRRCNTPMGRD 511
           TLSHLRRCNTPMGRD
Sbjct: 521 TLSHLRRCNTPMGRD 535



 Score = 84.3 bits (207), Expect(2) = 3e-78
 Identities = 39/42 (92%), Positives = 41/42 (97%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEK+K+ F
Sbjct: 366 RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKRKAFF 407


>gb|PKY44798.1| DNA-directed RNA polymerase II subunit RPB2 [Rhizophagus
           irregularis]
          Length = 1284

 Score =  235 bits (600), Expect(2) = 3e-78
 Identities = 118/135 (87%), Positives = 119/135 (88%)
 Frame = +2

Query: 107 KKRKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSA 286
           +KRKAFFLGYMVH                HYGKKRMDLAGPLLASLFRMLFKKLTKDVSA
Sbjct: 398 EKRKAFFLGYMVHRLLLAALGRRELDDRDHYGKKRMDLAGPLLASLFRMLFKKLTKDVSA 457

Query: 287 YLRKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS 466
           YLRKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS
Sbjct: 458 YLRKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS 517

Query: 467 TLSHLRRCNTPMGRD 511
           TLSHLRRCNTPMGRD
Sbjct: 518 TLSHLRRCNTPMGRD 532



 Score = 84.3 bits (207), Expect(2) = 3e-78
 Identities = 39/42 (92%), Positives = 41/42 (97%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEK+K+ F
Sbjct: 363 RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKRKAFF 404


>gb|PKK76623.1| DNA-directed RNA polymerase II subunit RPB2 [Rhizophagus
           irregularis]
          Length = 1284

 Score =  235 bits (600), Expect(2) = 3e-78
 Identities = 118/135 (87%), Positives = 119/135 (88%)
 Frame = +2

Query: 107 KKRKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSA 286
           +KRKAFFLGYMVH                HYGKKRMDLAGPLLASLFRMLFKKLTKDVSA
Sbjct: 398 EKRKAFFLGYMVHRLLLAALGRRELDDRDHYGKKRMDLAGPLLASLFRMLFKKLTKDVSA 457

Query: 287 YLRKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS 466
           YLRKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS
Sbjct: 458 YLRKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS 517

Query: 467 TLSHLRRCNTPMGRD 511
           TLSHLRRCNTPMGRD
Sbjct: 518 TLSHLRRCNTPMGRD 532



 Score = 84.3 bits (207), Expect(2) = 3e-78
 Identities = 39/42 (92%), Positives = 41/42 (97%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEK+K+ F
Sbjct: 363 RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKRKAFF 404


>gb|ABM27011.1| RNA polymerase II second largest subunit, partial [Funneliformis
           mosseae]
          Length = 883

 Score =  231 bits (589), Expect(2) = 2e-76
 Identities = 116/135 (85%), Positives = 117/135 (86%)
 Frame = +2

Query: 107 KKRKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSA 286
           +KRKAFFLGYMVH                HYGKKRMDLAGPLLASLFRMLFKKLTKDVS 
Sbjct: 159 EKRKAFFLGYMVHRLLLAALGRRELDDRDHYGKKRMDLAGPLLASLFRMLFKKLTKDVSI 218

Query: 287 YLRKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS 466
           YLRKCID NREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS
Sbjct: 219 YLRKCIDSNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS 278

Query: 467 TLSHLRRCNTPMGRD 511
           TLSHLRRCNTPMGRD
Sbjct: 279 TLSHLRRCNTPMGRD 293



 Score = 82.8 bits (203), Expect(2) = 2e-76
 Identities = 38/42 (90%), Positives = 40/42 (95%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           RRGT TGATRDKRIKYAKDILQKELLPHVSTEYGCEK+K+ F
Sbjct: 124 RRGTTTGATRDKRIKYAKDILQKELLPHVSTEYGCEKRKAFF 165


>gb|ABM27012.1| RNA polymerase II second largest subunit, partial [Funneliformis
           mosseae]
          Length = 883

 Score =  231 bits (589), Expect(2) = 2e-76
 Identities = 116/135 (85%), Positives = 117/135 (86%)
 Frame = +2

Query: 107 KKRKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSA 286
           +KRKAFFLGYMVH                HYGKKRMDLAGPLLASLFRMLFKKLTKDVS 
Sbjct: 159 EKRKAFFLGYMVHRLLLAALGRRELDDRDHYGKKRMDLAGPLLASLFRMLFKKLTKDVSI 218

Query: 287 YLRKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS 466
           YLRKCID NREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS
Sbjct: 219 YLRKCIDSNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS 278

Query: 467 TLSHLRRCNTPMGRD 511
           TLSHLRRCNTPMGRD
Sbjct: 279 TLSHLRRCNTPMGRD 293



 Score = 82.8 bits (203), Expect(2) = 2e-76
 Identities = 38/42 (90%), Positives = 40/42 (95%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           RRGT TGATRDKRIKYAKDILQKELLPHVSTEYGCEK+K+ F
Sbjct: 124 RRGTTTGATRDKRIKYAKDILQKELLPHVSTEYGCEKRKAFF 165


>gb|ABM27013.1| RNA polymerase II second largest subunit, partial [Gigaspora
           gigantea]
          Length = 894

 Score =  226 bits (576), Expect(2) = 2e-74
 Identities = 113/135 (83%), Positives = 117/135 (86%)
 Frame = +2

Query: 107 KKRKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSA 286
           +KRKAFFLGYMVH                HYGKKRMDLAGPLLASLFRMLFKKLTKD+S 
Sbjct: 159 EKRKAFFLGYMVHRLLLAALGRRELDDRDHYGKKRMDLAGPLLASLFRMLFKKLTKDISI 218

Query: 287 YLRKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS 466
           YLRKCID +REFNL+LAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS
Sbjct: 219 YLRKCIDTSREFNLHLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFAS 278

Query: 467 TLSHLRRCNTPMGRD 511
           TLSHLRRCNTPMGRD
Sbjct: 279 TLSHLRRCNTPMGRD 293



 Score = 81.3 bits (199), Expect(2) = 2e-74
 Identities = 37/42 (88%), Positives = 40/42 (95%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           RRGT TGATRDKRIKYAK+ILQKELLPHVSTEYGCEK+K+ F
Sbjct: 124 RRGTTTGATRDKRIKYAKEILQKELLPHVSTEYGCEKRKAFF 165


>emb|CDS06523.1| Putative DNA-directed RNA polymerase(Fragment) [Lichtheimia ramosa]
          Length = 1221

 Score =  208 bits (530), Expect(2) = 4e-63
 Identities = 100/133 (75%), Positives = 110/133 (82%)
 Frame = +2

Query: 113 RKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSAYL 292
           RKA+F GYM+H                HYGKKRMDLAGPL+A LFR+LF+KLTKDVS YL
Sbjct: 385 RKAYFFGYMIHRLLLAALERRELDDRDHYGKKRMDLAGPLMAGLFRLLFRKLTKDVSKYL 444

Query: 293 RKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 472
           +KCI+  REFNL LA+K+ TITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL
Sbjct: 445 QKCIESGREFNLTLAVKSNTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 504

Query: 473 SHLRRCNTPMGRD 511
           SHLRRCNTP+GRD
Sbjct: 505 SHLRRCNTPIGRD 517



 Score = 60.8 bits (146), Expect(2) = 4e-63
 Identities = 28/42 (66%), Positives = 34/42 (80%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           +RG+  GATR+KRIKYA +ILQKELLPHV TEY  E +K+ F
Sbjct: 348 KRGSTVGATREKRIKYATEILQKELLPHVGTEYRNETRKAYF 389


>dbj|GAN00868.1| DNA-dependent RNA polymerase II second largest subunit [Mucor
           ambiguus]
          Length = 1217

 Score =  206 bits (525), Expect(2) = 4e-63
 Identities = 98/133 (73%), Positives = 111/133 (83%)
 Frame = +2

Query: 113 RKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSAYL 292
           RK++F GYM+H                HYGKKRMDLAGPL+ASLFR+LFKKLTKDV+ YL
Sbjct: 381 RKSYFFGYMIHRLLLAALERRELDDRDHYGKKRMDLAGPLMASLFRLLFKKLTKDVAKYL 440

Query: 293 RKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 472
           +KCI+ +REFNL LA+K+ TITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYT+ STL
Sbjct: 441 QKCIESSREFNLTLAVKSNTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTYTSTL 500

Query: 473 SHLRRCNTPMGRD 511
           SHLRRCNTP+GRD
Sbjct: 501 SHLRRCNTPIGRD 513



 Score = 62.8 bits (151), Expect(2) = 4e-63
 Identities = 29/42 (69%), Positives = 33/42 (78%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           +RGT  GAT+DKRIKYA +ILQKELLPHV T Y  E +KS F
Sbjct: 344 KRGTTVGATKDKRIKYASEILQKELLPHVGTAYKTETRKSYF 385


>gb|EPB87906.1| DNA-directed RNA polymerase II subunit RPB2 [Mucor circinelloides
           f. circinelloides 1006PhL]
          Length = 1217

 Score =  206 bits (525), Expect(2) = 4e-63
 Identities = 98/133 (73%), Positives = 111/133 (83%)
 Frame = +2

Query: 113 RKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSAYL 292
           RK++F GYM+H                HYGKKRMDLAGPL+ASLFR+LFKKLTKDV+ YL
Sbjct: 381 RKSYFFGYMIHRLLLAALERRELDDRDHYGKKRMDLAGPLMASLFRLLFKKLTKDVAKYL 440

Query: 293 RKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 472
           +KCI+ +REFNL LA+K+ TITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYT+ STL
Sbjct: 441 QKCIESSREFNLTLAVKSNTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTYTSTL 500

Query: 473 SHLRRCNTPMGRD 511
           SHLRRCNTP+GRD
Sbjct: 501 SHLRRCNTPIGRD 513



 Score = 62.8 bits (151), Expect(2) = 4e-63
 Identities = 29/42 (69%), Positives = 33/42 (78%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           +RGT  GAT+DKRIKYA +ILQKELLPHV T Y  E +KS F
Sbjct: 344 KRGTTVGATKDKRIKYASEILQKELLPHVGTAYKTETRKSYF 385


>gb|AEX16088.1| RPB2, partial [Mucor circinelloides f. lusitanicus]
 gb|OAC98965.1| hypothetical protein MUCCIDRAFT_149398 [Mucor circinelloides f.
           lusitanicus CBS 277.49]
          Length = 931

 Score =  206 bits (525), Expect(2) = 4e-63
 Identities = 98/133 (73%), Positives = 111/133 (83%)
 Frame = +2

Query: 113 RKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSAYL 292
           RK++F GYM+H                HYGKKRMDLAGPL+ASLFR+LFKKLTKDV+ YL
Sbjct: 178 RKSYFFGYMIHRLLLAALERRELDDRDHYGKKRMDLAGPLMASLFRLLFKKLTKDVAKYL 237

Query: 293 RKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 472
           +KCI+ +REFNL LA+K+ TITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYT+ STL
Sbjct: 238 QKCIESSREFNLTLAVKSNTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTYTSTL 297

Query: 473 SHLRRCNTPMGRD 511
           SHLRRCNTP+GRD
Sbjct: 298 SHLRRCNTPIGRD 310



 Score = 62.8 bits (151), Expect(2) = 4e-63
 Identities = 29/42 (69%), Positives = 33/42 (78%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           +RGT  GAT+DKRIKYA +ILQKELLPHV T Y  E +KS F
Sbjct: 141 KRGTTVGATKDKRIKYASEILQKELLPHVGTAYKTETRKSYF 182


>emb|CEI96996.1| Putative DNA-directed RNA polymerase (Fragment) [Rhizopus
           microsporus]
          Length = 1319

 Score =  207 bits (528), Expect(2) = 6e-63
 Identities = 99/133 (74%), Positives = 112/133 (84%)
 Frame = +2

Query: 113 RKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSAYL 292
           RK++F GYM+H                HYGKKRMDLAGPL+A LFR+LFKKLTKDV+ YL
Sbjct: 370 RKSYFFGYMIHRLLLAALERRELDDRDHYGKKRMDLAGPLMAGLFRILFKKLTKDVAKYL 429

Query: 293 RKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 472
           +KCI+ +REFNL+LA+K+ TITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL
Sbjct: 430 QKCIESSREFNLSLAVKSNTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 489

Query: 473 SHLRRCNTPMGRD 511
           SHLRRCNTP+GRD
Sbjct: 490 SHLRRCNTPIGRD 502



 Score = 61.2 bits (147), Expect(2) = 6e-63
 Identities = 28/42 (66%), Positives = 33/42 (78%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           +RGT  GATR++RIKYA +ILQKELLPHV T Y  E +KS F
Sbjct: 333 KRGTTVGATRERRIKYASEILQKELLPHVGTAYKTETRKSYF 374



 Score =  153 bits (386), Expect = 9e-40
 Identities = 72/83 (86%), Positives = 80/83 (96%)
 Frame = +2

Query: 263 KLTKDVSAYLRKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQV 442
           KLTKDV+ YL+KCI+ +REFNL+LA+K+ TITNGLKYSLATGNWGDQKKAMQSRAGVSQV
Sbjct: 533 KLTKDVAKYLQKCIESSREFNLSLAVKSNTITNGLKYSLATGNWGDQKKAMQSRAGVSQV 592

Query: 443 LNRYTFASTLSHLRRCNTPMGRD 511
           LNRYTFASTLSHLRRCNTP+GRD
Sbjct: 593 LNRYTFASTLSHLRRCNTPIGRD 615


>gb|OBZ86727.1| DNA-directed RNA polymerase II subunit RPB2 [Choanephora
           cucurbitarum]
          Length = 1217

 Score =  206 bits (525), Expect(2) = 6e-63
 Identities = 98/133 (73%), Positives = 111/133 (83%)
 Frame = +2

Query: 113 RKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSAYL 292
           RK++F GYM+H                HYGKKRMDLAGPL+A LFR+LFKKLTKDV+ YL
Sbjct: 381 RKSYFFGYMIHRLLLAALERRELDDRDHYGKKRMDLAGPLMAGLFRLLFKKLTKDVAKYL 440

Query: 293 RKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 472
           +KCI+ +REFNL LA+K+ TITNGLKYSLATGNWGDQKKAMQ+RAGVSQVLNRYTFASTL
Sbjct: 441 QKCIESSREFNLTLAVKSNTITNGLKYSLATGNWGDQKKAMQARAGVSQVLNRYTFASTL 500

Query: 473 SHLRRCNTPMGRD 511
           SHLRRCNTP+GRD
Sbjct: 501 SHLRRCNTPIGRD 513



 Score = 62.4 bits (150), Expect(2) = 6e-63
 Identities = 29/42 (69%), Positives = 33/42 (78%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           +RGT  GATR+KRIKYA +ILQKELLPHV T Y  E +KS F
Sbjct: 344 KRGTTVGATREKRIKYASEILQKELLPHVGTAYKTETRKSYF 385


>gb|ORE15691.1| DNA-directed RNA polymerase II subunit RPB2 [Rhizopus microsporus]
          Length = 1215

 Score =  207 bits (528), Expect(2) = 6e-63
 Identities = 99/133 (74%), Positives = 112/133 (84%)
 Frame = +2

Query: 113 RKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSAYL 292
           RK++F GYM+H                HYGKKRMDLAGPL+A LFR+LFKKLTKDV+ YL
Sbjct: 379 RKSYFFGYMIHRLLLAALERRELDDRDHYGKKRMDLAGPLMAGLFRILFKKLTKDVAKYL 438

Query: 293 RKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 472
           +KCI+ +REFNL+LA+K+ TITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL
Sbjct: 439 QKCIESSREFNLSLAVKSNTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 498

Query: 473 SHLRRCNTPMGRD 511
           SHLRRCNTP+GRD
Sbjct: 499 SHLRRCNTPIGRD 511



 Score = 61.2 bits (147), Expect(2) = 6e-63
 Identities = 28/42 (66%), Positives = 33/42 (78%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           +RGT  GATR++RIKYA +ILQKELLPHV T Y  E +KS F
Sbjct: 342 KRGTTVGATRERRIKYASEILQKELLPHVGTAYKTETRKSYF 383


>ref|XP_023463302.1| DNA-dependent RNA polymerase II second largest subunit [Rhizopus
           microsporus ATCC 52813]
 gb|ORE05682.1| DNA-directed RNA polymerase II subunit RPB2 [Rhizopus microsporus
           var. microsporus]
 gb|PHZ09594.1| DNA-dependent RNA polymerase II second largest subunit [Rhizopus
           microsporus ATCC 52813]
          Length = 1215

 Score =  207 bits (528), Expect(2) = 6e-63
 Identities = 99/133 (74%), Positives = 112/133 (84%)
 Frame = +2

Query: 113 RKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSAYL 292
           RK++F GYM+H                HYGKKRMDLAGPL+A LFR+LFKKLTKDV+ YL
Sbjct: 379 RKSYFFGYMIHRLLLAALERRELDDRDHYGKKRMDLAGPLMAGLFRILFKKLTKDVAKYL 438

Query: 293 RKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 472
           +KCI+ +REFNL+LA+K+ TITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL
Sbjct: 439 QKCIESSREFNLSLAVKSNTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 498

Query: 473 SHLRRCNTPMGRD 511
           SHLRRCNTP+GRD
Sbjct: 499 SHLRRCNTPIGRD 511



 Score = 61.2 bits (147), Expect(2) = 6e-63
 Identities = 28/42 (66%), Positives = 33/42 (78%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           +RGT  GATR++RIKYA +ILQKELLPHV T Y  E +KS F
Sbjct: 342 KRGTTVGATRERRIKYASEILQKELLPHVGTAYKTETRKSYF 383


>emb|CEG69567.1| Putative DNA-directed RNA polymerase (Fragment) [Rhizopus
           microsporus]
          Length = 1215

 Score =  207 bits (528), Expect(2) = 6e-63
 Identities = 99/133 (74%), Positives = 112/133 (84%)
 Frame = +2

Query: 113 RKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSAYL 292
           RK++F GYM+H                HYGKKRMDLAGPL+A LFR+LFKKLTKDV+ YL
Sbjct: 379 RKSYFFGYMIHRLLLAALERRELDDRDHYGKKRMDLAGPLMAGLFRILFKKLTKDVAKYL 438

Query: 293 RKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 472
           +KCI+ +REFNL+LA+K+ TITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL
Sbjct: 439 QKCIESSREFNLSLAVKSNTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 498

Query: 473 SHLRRCNTPMGRD 511
           SHLRRCNTP+GRD
Sbjct: 499 SHLRRCNTPIGRD 511



 Score = 61.2 bits (147), Expect(2) = 6e-63
 Identities = 28/42 (66%), Positives = 33/42 (78%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           +RGT  GATR++RIKYA +ILQKELLPHV T Y  E +KS F
Sbjct: 342 KRGTTVGATRERRIKYASEILQKELLPHVGTAYKTETRKSYF 383


>emb|CEG69568.1| Putative DNA-directed RNA polymerase [Rhizopus microsporus]
          Length = 1201

 Score =  207 bits (528), Expect(2) = 6e-63
 Identities = 99/133 (74%), Positives = 112/133 (84%)
 Frame = +2

Query: 113 RKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSAYL 292
           RK++F GYM+H                HYGKKRMDLAGPL+A LFR+LFKKLTKDV+ YL
Sbjct: 365 RKSYFFGYMIHRLLLAALERRELDDRDHYGKKRMDLAGPLMAGLFRILFKKLTKDVAKYL 424

Query: 293 RKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 472
           +KCI+ +REFNL+LA+K+ TITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL
Sbjct: 425 QKCIESSREFNLSLAVKSNTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 484

Query: 473 SHLRRCNTPMGRD 511
           SHLRRCNTP+GRD
Sbjct: 485 SHLRRCNTPIGRD 497



 Score = 61.2 bits (147), Expect(2) = 6e-63
 Identities = 28/42 (66%), Positives = 33/42 (78%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           +RGT  GATR++RIKYA +ILQKELLPHV T Y  E +KS F
Sbjct: 328 KRGTTVGATRERRIKYASEILQKELLPHVGTAYKTETRKSYF 369


>emb|CEP11859.1| hypothetical protein [Parasitella parasitica]
          Length = 1188

 Score =  206 bits (524), Expect(2) = 6e-63
 Identities = 98/133 (73%), Positives = 111/133 (83%)
 Frame = +2

Query: 113 RKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSAYL 292
           RK++F GYM+H                HYGKKRMDLAGPL+ASLFR+LFKKLTKDV+ YL
Sbjct: 352 RKSYFFGYMIHRLLLAALERRELDDRDHYGKKRMDLAGPLMASLFRILFKKLTKDVAKYL 411

Query: 293 RKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 472
           +KCI+ +REFNL LA+K+ TITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYT+ STL
Sbjct: 412 QKCIESSREFNLTLAVKSNTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTYTSTL 471

Query: 473 SHLRRCNTPMGRD 511
           SHLRRCNTP+GRD
Sbjct: 472 SHLRRCNTPIGRD 484



 Score = 62.8 bits (151), Expect(2) = 6e-63
 Identities = 29/42 (69%), Positives = 33/42 (78%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           +RGT  GAT+DKRIKYA +ILQKELLPHV T Y  E +KS F
Sbjct: 315 KRGTTVGATKDKRIKYASEILQKELLPHVGTAYKTETRKSYF 356


>emb|CEG69569.1| Putative DNA-directed RNA polymerase [Rhizopus microsporus]
          Length = 1114

 Score =  207 bits (528), Expect(2) = 6e-63
 Identities = 99/133 (74%), Positives = 112/133 (84%)
 Frame = +2

Query: 113 RKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSAYL 292
           RK++F GYM+H                HYGKKRMDLAGPL+A LFR+LFKKLTKDV+ YL
Sbjct: 278 RKSYFFGYMIHRLLLAALERRELDDRDHYGKKRMDLAGPLMAGLFRILFKKLTKDVAKYL 337

Query: 293 RKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 472
           +KCI+ +REFNL+LA+K+ TITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL
Sbjct: 338 QKCIESSREFNLSLAVKSNTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 397

Query: 473 SHLRRCNTPMGRD 511
           SHLRRCNTP+GRD
Sbjct: 398 SHLRRCNTPIGRD 410



 Score = 61.2 bits (147), Expect(2) = 6e-63
 Identities = 28/42 (66%), Positives = 33/42 (78%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           +RGT  GATR++RIKYA +ILQKELLPHV T Y  E +KS F
Sbjct: 241 KRGTTVGATRERRIKYASEILQKELLPHVGTAYKTETRKSYF 282


>emb|CEG83450.1| Putative DNA-directed RNA polymerase [Rhizopus microsporus]
          Length = 896

 Score =  207 bits (528), Expect(2) = 6e-63
 Identities = 99/133 (74%), Positives = 112/133 (84%)
 Frame = +2

Query: 113 RKAFFLGYMVHXXXXXXXXXXXXXXXXHYGKKRMDLAGPLLASLFRMLFKKLTKDVSAYL 292
           RK++F GYM+H                HYGKKRMDLAGPL+A LFR+LFKKLTKDV+ YL
Sbjct: 64  RKSYFFGYMIHRLLLAALERRELDDRDHYGKKRMDLAGPLMAGLFRILFKKLTKDVAKYL 123

Query: 293 RKCIDGNREFNLNLAIKAQTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 472
           +KCI+ +REFNL+LA+K+ TITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL
Sbjct: 124 QKCIESSREFNLSLAVKSNTITNGLKYSLATGNWGDQKKAMQSRAGVSQVLNRYTFASTL 183

Query: 473 SHLRRCNTPMGRD 511
           SHLRRCNTP+GRD
Sbjct: 184 SHLRRCNTPIGRD 196



 Score = 61.2 bits (147), Expect(2) = 6e-63
 Identities = 28/42 (66%), Positives = 33/42 (78%)
 Frame = +1

Query: 1   RRGTATGATRDKRIKYAKDILQKELLPHVSTEYGCEKKKSIF 126
           +RGT  GATR++RIKYA +ILQKELLPHV T Y  E +KS F
Sbjct: 27  KRGTTVGATRERRIKYASEILQKELLPHVGTAYKTETRKSYF 68