BLASTX nr result

ID: Ophiopogon27_contig00044217 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00044217
         (484 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC53887.1| DNA-directed RNA polymerase I subunit rpa2 [Rhiz...   108   3e-24
gb|PKY49831.1| hypothetical protein RhiirA4_405869 [Rhizophagus ...   108   3e-24
gb|PKK72186.1| hypothetical protein RhiirC2_743268 [Rhizophagus ...   108   3e-24
gb|EXX68400.1| hypothetical protein RirG_105530 [Rhizophagus irr...   108   3e-24

>dbj|GBC53887.1| DNA-directed RNA polymerase I subunit rpa2 [Rhizophagus irregularis
           DAOM 181602]
          Length = 583

 Score =  108 bits (269), Expect = 3e-24
 Identities = 72/149 (48%), Positives = 73/149 (48%)
 Frame = -3

Query: 449 SANRFTNSMMPTATISXXXXXXXXXXXXQNMSTTNNISDYAMMNASTNSEQSYQVSLPPL 270
           SANRFTNSMMPTATIS            QNMSTT+NISDYAMMNASTNSEQSYQVSLPPL
Sbjct: 356 SANRFTNSMMPTATISTTYQQHHPTPQHQNMSTTSNISDYAMMNASTNSEQSYQVSLPPL 415

Query: 269 VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDQYGMSXXXXXXXXQNVXXXXXXXXX 90
           V                                GDQYGMS        QNV         
Sbjct: 416 VGIGNMSMGNTGAGNGGAGNIQGSGILPSIIGIGDQYGMSQQQQLQQLQNVGYAGYIGGG 475

Query: 89  XXXXXXXXXXXXXXNAYGMMRYSSAGGNG 3
                         NAYGMMRY SAGGNG
Sbjct: 476 GTGAGISGTGFGTTNAYGMMRYPSAGGNG 504


>gb|PKY49831.1| hypothetical protein RhiirA4_405869 [Rhizophagus irregularis]
          Length = 604

 Score =  108 bits (269), Expect = 3e-24
 Identities = 72/149 (48%), Positives = 73/149 (48%)
 Frame = -3

Query: 449 SANRFTNSMMPTATISXXXXXXXXXXXXQNMSTTNNISDYAMMNASTNSEQSYQVSLPPL 270
           SANRFTNSMMPTATIS            QNMSTT+NISDYAMMNASTNSEQSYQVSLPPL
Sbjct: 377 SANRFTNSMMPTATISTTYQQHHPTPQHQNMSTTSNISDYAMMNASTNSEQSYQVSLPPL 436

Query: 269 VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDQYGMSXXXXXXXXQNVXXXXXXXXX 90
           V                                GDQYGMS        QNV         
Sbjct: 437 VGMGNMSMGNTGAGNGGAGNIQGSGILPSIIGIGDQYGMSQQQQLQQLQNVGYAGYIGGG 496

Query: 89  XXXXXXXXXXXXXXNAYGMMRYSSAGGNG 3
                         NAYGMMRY SAGGNG
Sbjct: 497 GTGAGISGTGFGTTNAYGMMRYPSAGGNG 525


>gb|PKK72186.1| hypothetical protein RhiirC2_743268 [Rhizophagus irregularis]
          Length = 604

 Score =  108 bits (269), Expect = 3e-24
 Identities = 72/149 (48%), Positives = 73/149 (48%)
 Frame = -3

Query: 449 SANRFTNSMMPTATISXXXXXXXXXXXXQNMSTTNNISDYAMMNASTNSEQSYQVSLPPL 270
           SANRFTNSMMPTATIS            QNMSTT+NISDYAMMNASTNSEQSYQVSLPPL
Sbjct: 377 SANRFTNSMMPTATISTTYQQHHPTPQHQNMSTTSNISDYAMMNASTNSEQSYQVSLPPL 436

Query: 269 VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDQYGMSXXXXXXXXQNVXXXXXXXXX 90
           V                                GDQYGMS        QNV         
Sbjct: 437 VGIGNMSMGNTGAGNGGAGNIQGSGILPSIIGIGDQYGMSQQQQLQQLQNVGYAGYIGGG 496

Query: 89  XXXXXXXXXXXXXXNAYGMMRYSSAGGNG 3
                         NAYGMMRY SAGGNG
Sbjct: 497 GTGAGISGTGFGTTNAYGMMRYPSAGGNG 525


>gb|EXX68400.1| hypothetical protein RirG_105530 [Rhizophagus irregularis DAOM
           197198w]
 gb|PKC06254.1| hypothetical protein RhiirA5_360458 [Rhizophagus irregularis]
 gb|PKC60431.1| hypothetical protein RhiirA1_425943 [Rhizophagus irregularis]
 gb|PKY26809.1| hypothetical protein RhiirB3_415540 [Rhizophagus irregularis]
 gb|POG59495.1| hypothetical protein GLOIN_2v1721719 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 606

 Score =  108 bits (269), Expect = 3e-24
 Identities = 72/149 (48%), Positives = 73/149 (48%)
 Frame = -3

Query: 449 SANRFTNSMMPTATISXXXXXXXXXXXXQNMSTTNNISDYAMMNASTNSEQSYQVSLPPL 270
           SANRFTNSMMPTATIS            QNMSTT+NISDYAMMNASTNSEQSYQVSLPPL
Sbjct: 379 SANRFTNSMMPTATISTTYQQHHPTPQHQNMSTTSNISDYAMMNASTNSEQSYQVSLPPL 438

Query: 269 VXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDQYGMSXXXXXXXXQNVXXXXXXXXX 90
           V                                GDQYGMS        QNV         
Sbjct: 439 VGIGNMSMGNTGAGNGGAGNIQGSGILPSIIGIGDQYGMSQQQQLQQLQNVGYAGYIGGG 498

Query: 89  XXXXXXXXXXXXXXNAYGMMRYSSAGGNG 3
                         NAYGMMRY SAGGNG
Sbjct: 499 GTGAGISGTGFGTTNAYGMMRYPSAGGNG 527


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