BLASTX nr result

ID: Ophiopogon27_contig00044034 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00044034
         (788 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC41802.1| multidomain vesicle coat component sec16 [Rhizop...   442   e-140

>dbj|GBC41802.1| multidomain vesicle coat component sec16 [Rhizophagus irregularis
            DAOM 181602]
          Length = 1832

 Score =  442 bits (1138), Expect = e-140
 Identities = 232/263 (88%), Positives = 236/263 (89%), Gaps = 1/263 (0%)
 Frame = -1

Query: 788  AVALVETIETNQESGTVTSSKVENDFIEKDGKSNDLENEDQEVNIIHGDDHDIFEYQPQE 609
            AVALVETIETNQES TVTSSKVENDFIEKDGKSNDLENEDQEVNIIHGDDHDIFEYQP E
Sbjct: 338  AVALVETIETNQESVTVTSSKVENDFIEKDGKSNDLENEDQEVNIIHGDDHDIFEYQPHE 397

Query: 608  LESHPKLELSQVEPPVSSLTDESKITSEISDANEIEEINDKSKDEQTKLDDLDDLVLGST 429
            LESHPK E SQVEPP+SSL D+SKITSEISDANEIEEINDKSKDEQTKLDDLDDLVLGST
Sbjct: 398  LESHPKSEPSQVEPPISSLQDKSKITSEISDANEIEEINDKSKDEQTKLDDLDDLVLGST 457

Query: 428  SKSGTSKVLSYIELEGVANIQERYSISAQDSDSTALXXXXXXXXXSGQDHQYNGQYNGQW 249
            +KSGTSKVLSYIELEGVAN QERYSISAQDSD TAL         S QDH    QYNGQW
Sbjct: 458  NKSGTSKVLSYIELEGVANTQERYSISAQDSDLTALNSSSYQYNYSDQDH----QYNGQW 513

Query: 248  VSNDVNYQYQ-YDANQIIGDTTPSSEQVDYKYKENDFDQTTRDIVNYHYELPTTEKEQSI 72
            VSNDVNYQYQ YDANQIIGDTT SSEQVDYKYKEND DQTTRDIVNYHYE  TTEKEQSI
Sbjct: 514  VSNDVNYQYQEYDANQIIGDTTTSSEQVDYKYKENDSDQTTRDIVNYHYEPATTEKEQSI 573

Query: 71   GQYSNQAGVDDINQSNYQYDSSQ 3
             QYSN+AGVDDINQSNYQYDSSQ
Sbjct: 574  EQYSNRAGVDDINQSNYQYDSSQ 596


Top