BLASTX nr result

ID: Ophiopogon27_contig00044008 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00044008
         (440 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKC73545.1| hypothetical protein RhiirA1_410429 [Rhizophagus ...    55   1e-07
dbj|GBC50324.1| Tis13_344283 [Rhizophagus irregularis DAOM 18160...    55   1e-07

>gb|PKC73545.1| hypothetical protein RhiirA1_410429 [Rhizophagus irregularis]
 gb|PKK76366.1| hypothetical protein RhiirC2_734421 [Rhizophagus irregularis]
 gb|PKY20602.1| hypothetical protein RhiirB3_408499 [Rhizophagus irregularis]
          Length = 67

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 35/59 (59%), Positives = 36/59 (61%)
 Frame = -3

Query: 360 MRSSSTIAFLAVLFIAFXXXXXXXXXXXXXXLMYKRQXXXXXXXXXSTIELSFISFAIM 184
           MRSSST+AFLAVLFIAF              LMYKRQ         STIELSFISFAIM
Sbjct: 1   MRSSSTLAFLAVLFIAFTLTLAEETQQLEPTLMYKRQYGSSYSSSSSTIELSFISFAIM 59


>dbj|GBC50324.1| Tis13_344283 [Rhizophagus irregularis DAOM 181602]
 gb|POG73069.1| hypothetical protein GLOIN_2v1590430 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 67

 Score = 55.5 bits (132), Expect = 1e-07
 Identities = 34/59 (57%), Positives = 35/59 (59%)
 Frame = -3

Query: 360 MRSSSTIAFLAVLFIAFXXXXXXXXXXXXXXLMYKRQXXXXXXXXXSTIELSFISFAIM 184
           MRSSST+AFLAVLFIAF               MYKRQ         STIELSFISFAIM
Sbjct: 1   MRSSSTLAFLAVLFIAFTLTLAEETQQLEPTSMYKRQYGSSYSSSSSTIELSFISFAIM 59


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