BLASTX nr result

ID: Ophiopogon27_contig00043940 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00043940
         (531 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY46099.1| RNI-like protein [Rhizophagus irregularis]              71   5e-11

>gb|PKY46099.1| RNI-like protein [Rhizophagus irregularis]
          Length = 484

 Score = 70.9 bits (172), Expect = 5e-11
 Identities = 58/166 (34%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
 Frame = -2

Query: 530 VNPDDISIQNIRSALEENGHADALGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 351
           V+P+DISI+N+R+ALEENG+ADALG                                   
Sbjct: 319 VDPEDISIKNVRNALEENGYADALGELDDMEVEEEEEEEQEEEQEEDDVEKVEKFSAVKN 378

Query: 350 XL--DGQDTTELVASVENLSIRETVQKLDIENKVEQTXXXXXXXXXXXXXXXXXXXXXXX 177
            +  D ++TTEL+ S   + ++ET ++LDIENK E T                       
Sbjct: 379 EVKLDEKNTTELITS-SKIVVKET-KELDIENKKEPTVSKKLEKLPIKELEDKEDLVDP- 435

Query: 176 VQKFEKRSTEIKDVKEEVHRIE-----QSLNSESQVESIAERISKV 54
            QK EKR+ E K V+++   I      Q +NSE QVESI ERI+KV
Sbjct: 436 -QKSEKRTIEAKAVEDKTREINKDQENQLINSEDQVESIRERITKV 480


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