BLASTX nr result

ID: Ophiopogon27_contig00043734 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00043734
         (405 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX61515.1| hypothetical protein RirG_170460 [Rhizophagus irr...   180   7e-53
dbj|GBC53247.1| hypothetical protein RIR_3448100 [Rhizophagus ir...   129   1e-36

>gb|EXX61515.1| hypothetical protein RirG_170460 [Rhizophagus irregularis DAOM
           197198w]
 gb|PKC13546.1| hypothetical protein RhiirA5_396182 [Rhizophagus irregularis]
 gb|PKC68704.1| hypothetical protein RhiirA1_416655 [Rhizophagus irregularis]
 gb|PKK73713.1| hypothetical protein RhiirC2_740278 [Rhizophagus irregularis]
 gb|PKY16685.1| hypothetical protein RhiirB3_521366 [Rhizophagus irregularis]
 gb|PKY53765.1| hypothetical protein RhiirA4_409291 [Rhizophagus irregularis]
 gb|POG59143.1| hypothetical protein GLOIN_2v1724602 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 381

 Score =  180 bits (456), Expect = 7e-53
 Identities = 89/106 (83%), Positives = 90/106 (84%)
 Frame = -2

Query: 365 MSSLGINNXXXXXXXXXXXXXXXPKMPKSNPYVSTHNSSLAKYKYMKEEGVITIYNTKNL 186
           MSSLGINN               PKMPKSNPYVSTHNSSLAKYKY+KEEGVITIYNTKN 
Sbjct: 1   MSSLGINNTIVPTIVTPKPTSSIPKMPKSNPYVSTHNSSLAKYKYIKEEGVITIYNTKNP 60

Query: 185 SNNGSPDLIPKYQIKVPTSSDPNVCIQDYYNNSQIYWNAFPRLNEV 48
           SNNGSPDLIPKYQIKVPTSSDPNVCIQDYYNNSQIYWNAFPRLNEV
Sbjct: 61  SNNGSPDLIPKYQIKVPTSSDPNVCIQDYYNNSQIYWNAFPRLNEV 106


>dbj|GBC53247.1| hypothetical protein RIR_3448100 [Rhizophagus irregularis DAOM
           181602]
          Length = 86

 Score =  129 bits (325), Expect = 1e-36
 Identities = 67/86 (77%), Positives = 68/86 (79%)
 Frame = -2

Query: 365 MSSLGINNXXXXXXXXXXXXXXXPKMPKSNPYVSTHNSSLAKYKYMKEEGVITIYNTKNL 186
           MSSLGINN               PKMPKSNPYVSTHNSSLAKYKY+KEEGVITIYNTKN 
Sbjct: 1   MSSLGINNTIVPTIVTPKPTSSIPKMPKSNPYVSTHNSSLAKYKYIKEEGVITIYNTKNP 60

Query: 185 SNNGSPDLIPKYQIKVPTSSDPNVCI 108
           SNNGSPDLIPKYQIKVPTSSDPN  I
Sbjct: 61  SNNGSPDLIPKYQIKVPTSSDPNETI 86


Top