BLASTX nr result

ID: Ophiopogon27_contig00043681 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00043681
         (539 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX69497.1| hypothetical protein RirG_095580 [Rhizophagus irr...   265   5e-80
gb|PKC03940.1| hypothetical protein RhiirA5_362806 [Rhizophagus ...   148   3e-43

>gb|EXX69497.1| hypothetical protein RirG_095580 [Rhizophagus irregularis DAOM
            197198w]
 dbj|GBC34582.1| hypothetical protein RIR_1931100 [Rhizophagus irregularis DAOM
            181602]
          Length = 941

 Score =  265 bits (676), Expect = 5e-80
 Identities = 137/157 (87%), Positives = 138/157 (87%)
 Frame = +1

Query: 1    PRPQSIAVGNTSTNNTAKITHSNIASPNSNSGIRSPSVLRAPYYGGRQSTDSLSSHDEYS 180
            PRPQSIAVGNTSTNNT KITHSNIA+PNSNSGIRSPSVLRAPYYGGRQSTDSLSSHDEYS
Sbjct: 786  PRPQSIAVGNTSTNNT-KITHSNIATPNSNSGIRSPSVLRAPYYGGRQSTDSLSSHDEYS 844

Query: 181  ASSMIFTPPESPTGAXXXXXXXXXXXXXXXXXXPGRGTSPIPPHNTSMLATPTRLSKPST 360
            ASSMIFTPPESPTGA                  PGRGTSPIPPHNTSMLATPTRLSKPST
Sbjct: 845  ASSMIFTPPESPTGASETDSLTSLTSSVSYGSSPGRGTSPIPPHNTSMLATPTRLSKPST 904

Query: 361  RTSISKLPASSRMVPSKLATPSGQPVSGLRKPKMTKE 471
            RTSISKLPASSRMVPSKLATPSGQPVSGLRKPKMTKE
Sbjct: 905  RTSISKLPASSRMVPSKLATPSGQPVSGLRKPKMTKE 941


>gb|PKC03940.1| hypothetical protein RhiirA5_362806 [Rhizophagus irregularis]
 gb|PKY17068.1| hypothetical protein RhiirB3_403775 [Rhizophagus irregularis]
          Length = 94

 Score =  148 bits (374), Expect = 3e-43
 Identities = 76/94 (80%), Positives = 76/94 (80%)
 Frame = +1

Query: 190 MIFTPPESPTGAXXXXXXXXXXXXXXXXXXPGRGTSPIPPHNTSMLATPTRLSKPSTRTS 369
           MIFTPPESPTGA                  PGRGTSPIPPHNTSMLATPTRLSKPSTRTS
Sbjct: 1   MIFTPPESPTGASETDSLTSLTSSVSYGSSPGRGTSPIPPHNTSMLATPTRLSKPSTRTS 60

Query: 370 ISKLPASSRMVPSKLATPSGQPVSGLRKPKMTKE 471
           ISKLPASSRMVPSKLATPSGQPVSGLRKPKMTKE
Sbjct: 61  ISKLPASSRMVPSKLATPSGQPVSGLRKPKMTKE 94


Top