BLASTX nr result
ID: Ophiopogon27_contig00043541
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00043541
(582 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKY55971.1| replication factor-a protein [Rhizophagus irregul... 258 1e-79
gb|EXX63367.1| Rfa1p [Rhizophagus irregularis DAOM 197198w] >gi|... 257 3e-79
ref|XP_019012666.1| replication factor A1 [Kwoniella pini CBS 10... 70 2e-10
gb|ODN99929.1| replication factor A1 [Cryptococcus depauperatus ... 64 1e-08
gb|OBZ81736.1| Replication factor A protein 1, partial [Choaneph... 63 2e-08
gb|ODN94027.1| replication factor A1 [Cryptococcus depauperatus ... 63 3e-08
gb|EPB81205.1| hypothetical protein HMPREF1544_12091 [Mucor circ... 58 2e-06
ref|XP_017992570.1| replication factor-a protein 1 [Malassezia p... 58 2e-06
emb|CRK88089.1| CLUMA_CG001874, isoform A [Clunio marinus] 57 4e-06
>gb|PKY55971.1| replication factor-a protein [Rhizophagus irregularis]
Length = 619
Score = 258 bits (659), Expect = 1e-79
Identities = 138/197 (70%), Positives = 153/197 (77%), Gaps = 5/197 (2%)
Frame = -3
Query: 577 TKPKNPVLQLVRVNPGNSGEQGGSRYKIGLSDGFDLIQGIIPEHLIKTVCNGKKLDRGMI 398
++PKNPVLQLVRVNPG +GEQGGSRYKIGLSDGF+LIQGIIPEHLIKTVCNGKKLDRGMI
Sbjct: 25 SRPKNPVLQLVRVNPG-AGEQGGSRYKIGLSDGFELIQGIIPEHLIKTVCNGKKLDRGMI 83
Query: 397 IRLTNYSLSNSVPLQASRSNSRYLVILGFELVKDTPLELYGHLN-NDDSERSRAGTSR-- 227
I+LTNY+LSNS+PLQAS++ S+YLVILGFELVKD PLELYGH + +DD+ERSR G SR
Sbjct: 84 IKLTNYNLSNSIPLQASKNTSKYLVILGFELVKDVPLELYGHGHLSDDTERSRTGISRPN 143
Query: 226 --XXXXXXXXXXXXXXXPSAYGLXXXXXXXXXXXXXXXXNLDEGICSIDNISPYHNKWKL 53
PS +G+ N DEGICSIDNISPYHNKWKL
Sbjct: 144 PIQPQQPPQPPQLRPPVPSNFGINSSHNNNITPQRSSNKNSDEGICSIDNISPYHNKWKL 203
Query: 52 KAMVVQKSDLKTWTNSR 2
KAMVVQKSDLKTWTNSR
Sbjct: 204 KAMVVQKSDLKTWTNSR 220
>gb|EXX63367.1| Rfa1p [Rhizophagus irregularis DAOM 197198w]
dbj|GBC41046.1| DNA replication factor A protein1 [Rhizophagus irregularis DAOM
181602]
gb|PKC18044.1| replication factor-a protein [Rhizophagus irregularis]
gb|PKC71946.1| replication factor-a protein [Rhizophagus irregularis]
gb|PKK68846.1| replication factor-a protein [Rhizophagus irregularis]
gb|PKY15445.1| replication factor-a protein [Rhizophagus irregularis]
gb|POG63539.1| hypothetical protein GLOIN_2v1685334 [Rhizophagus irregularis DAOM
181602=DAOM 197198]
Length = 619
Score = 257 bits (656), Expect = 3e-79
Identities = 138/197 (70%), Positives = 152/197 (77%), Gaps = 5/197 (2%)
Frame = -3
Query: 577 TKPKNPVLQLVRVNPGNSGEQGGSRYKIGLSDGFDLIQGIIPEHLIKTVCNGKKLDRGMI 398
++PKNPVLQLVRVNPG GEQGGSRYKIGLSDGF+LIQGIIPEHLIKTVCNGKKLDRGMI
Sbjct: 25 SRPKNPVLQLVRVNPG-VGEQGGSRYKIGLSDGFELIQGIIPEHLIKTVCNGKKLDRGMI 83
Query: 397 IRLTNYSLSNSVPLQASRSNSRYLVILGFELVKDTPLELYGHLN-NDDSERSRAGTSR-- 227
I+LTNY+LSNS+PLQAS++ S+YLVILGFELVKD PLELYGH + +DD+ERSR G SR
Sbjct: 84 IKLTNYNLSNSIPLQASKNTSKYLVILGFELVKDVPLELYGHGHLSDDTERSRTGISRPN 143
Query: 226 --XXXXXXXXXXXXXXXPSAYGLXXXXXXXXXXXXXXXXNLDEGICSIDNISPYHNKWKL 53
PS +G+ N DEGICSIDNISPYHNKWKL
Sbjct: 144 PIQPQQPPQPPQLRPPVPSNFGINSSHNNNITPQRSSNKNSDEGICSIDNISPYHNKWKL 203
Query: 52 KAMVVQKSDLKTWTNSR 2
KAMVVQKSDLKTWTNSR
Sbjct: 204 KAMVVQKSDLKTWTNSR 220
>ref|XP_019012666.1| replication factor A1 [Kwoniella pini CBS 10737]
gb|OCF51447.1| replication factor A1 [Kwoniella pini CBS 10737]
Length = 610
Score = 69.7 bits (169), Expect = 2e-10
Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 2/189 (1%)
Frame = -3
Query: 562 PVLQLVRVNPGNS-GEQGGSRYKIGLSDGFDLIQGIIPEHLIKTVCNGKKLDRGMIIRLT 386
P+LQ++ V N+ G G RY++ LSDG IQ +I L V + K+LD+ +II+LT
Sbjct: 25 PILQVLSVKKINAPGAAGQDRYRLILSDGKHFIQAMIATQLNHLV-DSKELDKNVIIKLT 83
Query: 385 NYSLSNSVPLQASRSNSRYLVILGFELVKDTPLELYGHLNNDDSERSRAGTSRXXXXXXX 206
Y ++N+V + ++IL E V+ ++ N + + + G S
Sbjct: 84 GY-VTNAV------QGRKLVIILNLETVQWNGEKIGNPTNLEQQQSAGGGASTSAPAQAA 136
Query: 205 XXXXXXXXPSAYGLXXXXXXXXXXXXXXXXNLDEG-ICSIDNISPYHNKWKLKAMVVQKS 29
+ L D G + I+ +SPY NKW +KA V QKS
Sbjct: 137 PKQEVGGFQARQQLTAGRGGPQAKAGGVKGKQDVGPLYPIEGLSPYQNKWTIKARVTQKS 196
Query: 28 DLKTWTNSR 2
D+K ++N R
Sbjct: 197 DIKHYSNQR 205
>gb|ODN99929.1| replication factor A1 [Cryptococcus depauperatus CBS 7855]
Length = 610
Score = 64.3 bits (155), Expect = 1e-08
Identities = 54/195 (27%), Positives = 92/195 (47%), Gaps = 2/195 (1%)
Frame = -3
Query: 580 ITKPKNPVLQLVRVNP-GNSGEQGGSRYKIGLSDGFDLIQGIIPEHLIKTVCNGKKLDRG 404
+++ N V Q++ V + + RY++ LSDG +Q ++ L V K+LD+
Sbjct: 19 VSEAFNSVAQVLNVKKIAAANDSSVDRYRVILSDGQFFLQAMLATQLNHFV-ESKELDKH 77
Query: 403 MIIRLTNYSLSNSVPLQASRSNSRYLVILGFELVKDTPLELYGHLNNDDSERSRAGTSRX 224
++++TN+S+ NSV S+ + L+ILG E+V T E G+ + +S +S S
Sbjct: 78 SLVKVTNFSV-NSV------SSRKLLIILGLEIVPWTD-EKIGNPVSIESAKSNGTASVG 129
Query: 223 XXXXXXXXXXXXXXPSAYGLXXXXXXXXXXXXXXXXNLDEG-ICSIDNISPYHNKWKLKA 47
GL D G + I+ +SPY N+W +KA
Sbjct: 130 NNSGSAKPAVASNVAPPQGLSTSRGGHPNRGGDQKPKNDLGPLYPIEGLSPYQNRWTIKA 189
Query: 46 MVVQKSDLKTWTNSR 2
V+QKS++K ++N R
Sbjct: 190 RVIQKSEIKHYSNQR 204
>gb|OBZ81736.1| Replication factor A protein 1, partial [Choanephora cucurbitarum]
Length = 323
Score = 63.2 bits (152), Expect = 2e-08
Identities = 50/192 (26%), Positives = 89/192 (46%), Gaps = 4/192 (2%)
Frame = -3
Query: 565 NPVLQLVRVNPGNSGEQGGSRYKIGLSDGFDLIQGIIPEHLIKTVCNGKKLDRGMIIRLT 386
NPV+QL+ + P N G R+++ +SDG +QG++ H V +G + + I+RLT
Sbjct: 24 NPVVQLINIKPVNVN--GSIRHRVIVSDGDHFMQGMLAVHHASAVDDGT-IKKMCILRLT 80
Query: 385 NYSLSNSVPLQASRSNSRYLVILGFELVK-DTPLELYGHLNNDD---SERSRAGTSRXXX 218
S+ N + +N + LV+L F++++ D ++ ++ D ++ + TS
Sbjct: 81 E-SVCNPL------NNRKILVVLNFDVLQSDVDAKIGSPVSIDTIPTNDNTSTATSAPAS 133
Query: 217 XXXXXXXXXXXXPSAYGLXXXXXXXXXXXXXXXXNLDEGICSIDNISPYHNKWKLKAMVV 38
S YG L+ + I N++PY +W +KA V
Sbjct: 134 NFSTTRPETSSSSSGYG------NQAGFSSSANLQLEANLTPIRNLNPYQTRWHIKARVS 187
Query: 37 QKSDLKTWTNSR 2
QKS +K W N++
Sbjct: 188 QKSPIKEWQNAK 199
>gb|ODN94027.1| replication factor A1 [Cryptococcus depauperatus CBS 7841]
Length = 610
Score = 63.2 bits (152), Expect = 3e-08
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 2/195 (1%)
Frame = -3
Query: 580 ITKPKNPVLQLVRVNP-GNSGEQGGSRYKIGLSDGFDLIQGIIPEHLIKTVCNGKKLDRG 404
+++ N V Q++ V + + RY++ LSDG +Q ++ L V K+LD+
Sbjct: 19 VSEAFNSVAQVLNVKKIAAANDSSVDRYRVILSDGQFFLQAMLATQLNHFV-ESKELDKH 77
Query: 403 MIIRLTNYSLSNSVPLQASRSNSRYLVILGFELVKDTPLELYGHLNNDDSERSRAGTSRX 224
++++TN+S+ NSV S+ + L+ILG E+V T E G+ + +S ++ S
Sbjct: 78 SLVKVTNFSV-NSV------SSRKLLIILGLEIVPWTD-EKIGNPVSIESAKNNGTASVG 129
Query: 223 XXXXXXXXXXXXXXPSAYGLXXXXXXXXXXXXXXXXNLDEG-ICSIDNISPYHNKWKLKA 47
GL D G + I+ +SPY N+W +KA
Sbjct: 130 NNAGSAKPAVASNVAPPQGLSTSRGGHPNRGGDQKPKNDLGPLYPIEGLSPYQNRWTIKA 189
Query: 46 MVVQKSDLKTWTNSR 2
V+QKS++K ++N R
Sbjct: 190 RVIQKSEIKHYSNQR 204
>gb|EPB81205.1| hypothetical protein HMPREF1544_12091 [Mucor circinelloides f.
circinelloides 1006PhL]
Length = 597
Score = 58.2 bits (139), Expect = 2e-06
Identities = 47/191 (24%), Positives = 83/191 (43%), Gaps = 3/191 (1%)
Frame = -3
Query: 565 NPVLQLVRVNPGNSGEQGGSRYKIGLSDGFDLIQGIIPEHLIKTVCNGKKLDRGMIIRLT 386
+P +Q++ + QGG R+++ +SDG + +Q ++ + V + +++ R II L
Sbjct: 23 DPTVQIINIKAVTV--QGGIRHRVIISDGVNFMQAMLAQQHSPLV-DQEQIKRHSIITLK 79
Query: 385 NYSLSNSVPLQASRSNSRYLVILGFELVK---DTPLELYGHLNNDDSERSRAGTSRXXXX 215
+ + PLQ N + L++L F++V+ D + L N S A T+
Sbjct: 80 EWVCN---PLQ----NRKILILLNFDVVQVDVDAKIGAPASLENSSS----AATASNSNS 128
Query: 214 XXXXXXXXXXXPSAYGLXXXXXXXXXXXXXXXXNLDEGICSIDNISPYHNKWKLKAMVVQ 35
+ LD + I N++PY +W +KA V Q
Sbjct: 129 PSSPASSSVKQETKQEPRNDHSSNFSSGTAANMALDANVTGISNLNPYQTRWHIKARVTQ 188
Query: 34 KSDLKTWTNSR 2
KSD+K W NS+
Sbjct: 189 KSDIKKWHNSK 199
>ref|XP_017992570.1| replication factor-a protein 1 [Malassezia pachydermatis]
gb|KOS14938.1| replication factor-a protein 1 [Malassezia pachydermatis]
Length = 617
Score = 58.2 bits (139), Expect = 2e-06
Identities = 42/190 (22%), Positives = 79/190 (41%)
Frame = -3
Query: 571 PKNPVLQLVRVNPGNSGEQGGSRYKIGLSDGFDLIQGIIPEHLIKTVCNGKKLDRGMIIR 392
P +L L ++ RY++ LSDG Q ++ L K + + L+R +++R
Sbjct: 25 PVCQILSLKKLQTSAGSAAVSDRYRVVLSDGVYYTQAMLATQL-KPLVDAGSLERNVVVR 83
Query: 391 LTNYSLSNSVPLQASRSNSRYLVILGFELVKDTPLELYGHLNNDDSERSRAGTSRXXXXX 212
+ ++ +NSV N + L++L E++ G+ N ++ + + +
Sbjct: 84 VNQFT-ANSV------QNRKILILLSLEVLSSPLPHRVGNPQNIEAAKPESAMTSVPAPV 136
Query: 211 XXXXXXXXXXPSAYGLXXXXXXXXXXXXXXXXNLDEGICSIDNISPYHNKWKLKAMVVQK 32
A L + + I+ +SPY NKW +KA V K
Sbjct: 137 DTKPAASVPSVGAQALSGSHGMASASRGVTKSSSGMPVYPIEALSPYQNKWTIKARVTLK 196
Query: 31 SDLKTWTNSR 2
+D+K W+N+R
Sbjct: 197 TDIKHWSNAR 206
>emb|CRK88089.1| CLUMA_CG001874, isoform A [Clunio marinus]
Length = 615
Score = 57.0 bits (136), Expect = 4e-06
Identities = 46/192 (23%), Positives = 82/192 (42%), Gaps = 6/192 (3%)
Frame = -3
Query: 559 VLQLVRVNPGNSGEQGGSRYKIGLSDGFDLIQGIIPEHLIKTVCNGKKLDRGMIIRLTNY 380
VLQ++ N + +RY++ +SDG + + + + +L + IIR+T +
Sbjct: 28 VLQVIDSRRVNQQKSDLNRYRLLISDGVHIASFAMLAIDLNPIYESGQLSKNTIIRVTKH 87
Query: 379 SLSNSVPLQASRSNSRYLVILGFELVKDTPLELYGHLNNDD------SERSRAGTSRXXX 218
+ S V + S+ R LV++G +++ E+ + N D S + AGT +
Sbjct: 88 NCS-VVSRGSVGSDRRVLVLMGIDILHSGE-EVGSKIGNPDLYDPKGSTLNAAGTQKENY 145
Query: 217 XXXXXXXXXXXXPSAYGLXXXXXXXXXXXXXXXXNLDEGICSIDNISPYHNKWKLKAMVV 38
+AY + ID++SPY NKW +KA V
Sbjct: 146 NDNAGASSYNNQSNAYQKRENSYGNQSMNASSSNLNEHLTMPIDSLSPYQNKWVIKARVT 205
Query: 37 QKSDLKTWTNSR 2
KS ++TW+N +
Sbjct: 206 AKSQVRTWSNQK 217