BLASTX nr result

ID: Ophiopogon27_contig00042969 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00042969
         (470 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC41542.1| hypothetical protein RIR_2491300 [Rhizophagus ir...    69   2e-12

>dbj|GBC41542.1| hypothetical protein RIR_2491300 [Rhizophagus irregularis DAOM
           181602]
          Length = 92

 Score = 68.9 bits (167), Expect = 2e-12
 Identities = 39/77 (50%), Positives = 41/77 (53%)
 Frame = -3

Query: 360 FCSKPQDIQPSLNCPFYKYMNFSRTSGLRSRLNVL*IDITPFKGLS*KVPRHGFLTL*F* 181
           FCSKPQ IQPSL CP YKYMNFSR +GLRSRLN   + I                     
Sbjct: 41  FCSKPQAIQPSLYCPIYKYMNFSRITGLRSRLNFSRLIINS------------------- 81

Query: 180 SAYH*FPPLKTFYFYYR 130
                 PPLKTF FYYR
Sbjct: 82  ------PPLKTFNFYYR 92


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