BLASTX nr result

ID: Ophiopogon27_contig00042951 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00042951
         (564 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX74100.1| hypothetical protein RirG_054280 [Rhizophagus irr...    57   3e-07

>gb|EXX74100.1| hypothetical protein RirG_054280 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC35304.1| hypothetical protein RIR_1989700 [Rhizophagus irregularis DAOM
           181602]
 gb|PKC60288.1| hypothetical protein RhiirA1_426080 [Rhizophagus irregularis]
 gb|PKY29216.1| hypothetical protein RhiirB3_417805 [Rhizophagus irregularis]
          Length = 135

 Score = 57.4 bits (137), Expect = 3e-07
 Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
 Frame = +2

Query: 332 NMQRRASES-TSITEFKKIPIMRRYTLPSRINVFTPMIGSENNMRSPFAMFWEAGAGRDS 508
           N+QRRASES T   +FKK+P+ RRYTLP ++ +               + FWEAG  RDS
Sbjct: 81  NLQRRASESITEAVQFKKLPV-RRYTLPGKLGL---------------SKFWEAG--RDS 122

Query: 509 SVRAAMDNVQFG 544
           SV+ AMD+ QFG
Sbjct: 123 SVQVAMDHCQFG 134


Top