BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00042572
         (570 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX57533.1| Rna14p [Rhizophagus irregularis DAOM 197198w] >gi...   207   2e-58
dbj|GBC41048.1| Pre-mRNA 3'-end processing cleavage and polyaden...   118   7e-51
gb|PKK68847.1| hypothetical protein RhiirC2_749440 [Rhizophagus ...   169   4e-45

>gb|EXX57533.1| Rna14p [Rhizophagus irregularis DAOM 197198w]
 gb|PKC18045.1| hypothetical protein RhiirA5_393281 [Rhizophagus irregularis]
 gb|PKC71947.1| hypothetical protein RhiirA1_531625 [Rhizophagus irregularis]
 gb|PKY15444.1| hypothetical protein RhiirB3_466712 [Rhizophagus irregularis]
 gb|PKY55972.1| hypothetical protein RhiirA4_448575 [Rhizophagus irregularis]
 gb|POG63540.1| hypothetical protein GLOIN_2v1685349 [Rhizophagus irregularis DAOM
            181602=DAOM 197198]
          Length = 1050

 Score =  207 bits (526), Expect = 2e-58
 Identities = 109/139 (78%), Positives = 109/139 (78%)
 Frame = -1

Query: 570  MQSSWLLYDQTEAEKEQPTVGSVSGAPPEKIARHLATLTPVSNYKGPIINPAAXXXXXXX 391
            MQSSWLLYDQTEAEKEQPTVGSVSGAPPEKIARHLATLTPVSNYKGPIINPAA       
Sbjct: 911  MQSSWLLYDQTEAEKEQPTVGSVSGAPPEKIARHLATLTPVSNYKGPIINPAALMNVIVK 970

Query: 390  XXXXXVPSVRDRSPARTEGRSRTRQTETFGKQRGGAPKXXXXXXXXXXXXXXXXXXGPGI 211
                 VPSVRDRSPARTEGRSRTRQTETFGKQRGGAPK                  GPGI
Sbjct: 971  NNNILVPSVRDRSPARTEGRSRTRQTETFGKQRGGAPKRRRRDYDGEDDDSSDRGSGPGI 1030

Query: 210  NRPPEFDLFRARQAKRARG 154
            NRPPEFDLFRARQAKRARG
Sbjct: 1031 NRPPEFDLFRARQAKRARG 1049


>dbj|GBC41048.1| Pre-mRNA 3'-end processing cleavage and polyadenylation factor
            [Rhizophagus irregularis DAOM 181602]
          Length = 1007

 Score =  118 bits (295), Expect(2) = 7e-51
 Identities = 60/65 (92%), Positives = 62/65 (95%)
 Frame = -2

Query: 341  LKVEVVLAKLKRLANKEVAHPRGEDEIMMVKTMIPRIGVAAQESIAHQNSTFSGPARPNE 162
            + VEVVLAK KRLANKEVAHPRGEDEIMMVKTMIPRIGVAAQESIAH+NSTFSGPARPNE
Sbjct: 940  MNVEVVLAKPKRLANKEVAHPRGEDEIMMVKTMIPRIGVAAQESIAHRNSTFSGPARPNE 999

Query: 161  LVVID 147
            LVV D
Sbjct: 1000 LVVND 1004



 Score =  110 bits (275), Expect(2) = 7e-51
 Identities = 53/53 (100%), Positives = 53/53 (100%)
 Frame = -1

Query: 570  MQSSWLLYDQTEAEKEQPTVGSVSGAPPEKIARHLATLTPVSNYKGPIINPAA 412
            MQSSWLLYDQTEAEKEQPTVGSVSGAPPEKIARHLATLTPVSNYKGPIINPAA
Sbjct: 886  MQSSWLLYDQTEAEKEQPTVGSVSGAPPEKIARHLATLTPVSNYKGPIINPAA 938


>gb|PKK68847.1| hypothetical protein RhiirC2_749440 [Rhizophagus irregularis]
          Length = 957

 Score =  169 bits (428), Expect = 4e-45
 Identities = 86/98 (87%), Positives = 86/98 (87%)
 Frame = -1

Query: 570  MQSSWLLYDQTEAEKEQPTVGSVSGAPPEKIARHLATLTPVSNYKGPIINPAAXXXXXXX 391
            MQSSWLLYDQTEAEKEQPTVGSVSGAPPEKIARHLATLTPVSNYKGPIINPAA       
Sbjct: 836  MQSSWLLYDQTEAEKEQPTVGSVSGAPPEKIARHLATLTPVSNYKGPIINPAALMNVIVK 895

Query: 390  XXXXXVPSVRDRSPARTEGRSRTRQTETFGKQRGGAPK 277
                 VPSVRDRSPARTEGRSRTRQTETFGKQRGGAPK
Sbjct: 896  NNNILVPSVRDRSPARTEGRSRTRQTETFGKQRGGAPK 933