BLASTX nr result

ID: Ophiopogon27_contig00042506 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00042506
         (379 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY30649.1| WD40 repeat-like protein [Rhizophagus irregularis]      94   7e-20
gb|PKK63795.1| WD40 repeat-like protein [Rhizophagus irregularis]      94   7e-20
gb|EXX58517.1| Cdh1p [Rhizophagus irregularis DAOM 197198w] >gi|...    94   7e-20

>gb|PKY30649.1| WD40 repeat-like protein [Rhizophagus irregularis]
          Length = 496

 Score = 94.0 bits (232), Expect = 7e-20
 Identities = 49/64 (76%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
 Frame = +2

Query: 191 MPQQTGNNFDQAHQISSGAQRSEQNSTTVSPVRS-INITTQRNRSVTYDRHIPQRTPDPV 367
           M Q TGN+ DQAHQ S G +RSEQNSTTVSPVR+ IN TTQR    TYDRHIPQRTPDPV
Sbjct: 1   MSQHTGNHSDQAHQNSPGVRRSEQNSTTVSPVRTIINTTTQR---TTYDRHIPQRTPDPV 57

Query: 368 NDYR 379
           NDYR
Sbjct: 58  NDYR 61


>gb|PKK63795.1| WD40 repeat-like protein [Rhizophagus irregularis]
          Length = 496

 Score = 94.0 bits (232), Expect = 7e-20
 Identities = 49/64 (76%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
 Frame = +2

Query: 191 MPQQTGNNFDQAHQISSGAQRSEQNSTTVSPVRS-INITTQRNRSVTYDRHIPQRTPDPV 367
           M Q TGN+ DQAHQ S G +RSEQNSTTVSPVR+ IN TTQR    TYDRHIPQRTPDPV
Sbjct: 1   MSQHTGNHSDQAHQNSPGVRRSEQNSTTVSPVRTIINTTTQR---TTYDRHIPQRTPDPV 57

Query: 368 NDYR 379
           NDYR
Sbjct: 58  NDYR 61


>gb|EXX58517.1| Cdh1p [Rhizophagus irregularis DAOM 197198w]
 gb|EXX58518.1| Cdh1p [Rhizophagus irregularis DAOM 197198w]
 gb|EXX58519.1| Cdh1p [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC17142.1| WD40 domain-containing protein [Rhizophagus irregularis DAOM
           181602]
 gb|PKC00148.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|PKC57838.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|PKY55872.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|POG75350.1| cell cycle regulatory protein [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 496

 Score = 94.0 bits (232), Expect = 7e-20
 Identities = 49/64 (76%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
 Frame = +2

Query: 191 MPQQTGNNFDQAHQISSGAQRSEQNSTTVSPVRS-INITTQRNRSVTYDRHIPQRTPDPV 367
           M Q TGN+ DQAHQ S G +RSEQNSTTVSPVR+ IN TTQR    TYDRHIPQRTPDPV
Sbjct: 1   MSQHTGNHSDQAHQNSPGVRRSEQNSTTVSPVRTIINTTTQR---TTYDRHIPQRTPDPV 57

Query: 368 NDYR 379
           NDYR
Sbjct: 58  NDYR 61


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