BLASTX nr result

ID: Ophiopogon27_contig00042318 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00042318
         (822 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC35062.1| double-strand break DNA repair protein [Rhizopha...   400   e-131
gb|EXX63045.1| Mre11p [Rhizophagus irregularis DAOM 197198w] >gi...   400   e-131
gb|PKC17322.1| DNA repair exonuclease [Rhizophagus irregularis] ...   334   e-107
gb|PKY38327.1| DNA repair exonuclease [Rhizophagus irregularis]       332   e-107
gb|PKK77355.1| double-strand break repair protein MRE11, partial...    71   2e-10

>dbj|GBC35062.1| double-strand break DNA repair protein [Rhizophagus irregularis DAOM
            181602]
          Length = 814

 Score =  400 bits (1029), Expect = e-131
 Identities = 208/274 (75%), Positives = 211/274 (77%)
 Frame = +1

Query: 1    REYNRIRTSLFEQEFKNRIANSDRNGQKIVTYHYKEAERSQNQQFVAPLDFGDEEISQKN 180
            REYNRIRTSLFEQEFKNRIANSD NGQKIVTYHYKEAERSQNQ+FVAPLDFGDEEISQKN
Sbjct: 365  REYNRIRTSLFEQEFKNRIANSDSNGQKIVTYHYKEAERSQNQRFVAPLDFGDEEISQKN 424

Query: 181  ATYFVIGQLAKTLKEKPSHFFPENGILNSIDLYVNKNDENAVRDFFESTREHMKNHLINH 360
            ATYFVIGQLAKTLKEKPSHFFPENGILNSIDLYVNKNDENAVRDFFESTREHMKNHLINH
Sbjct: 425  ATYFVIGQLAKTLKEKPSHFFPENGILNSIDLYVNKNDENAVRDFFESTREHMKNHLINH 484

Query: 361  GIPENSLPGESEIKNVITLEKERLNQEWSTQFDPEHYLEKSRTEQSIXXXXXXXXXXHXX 540
            GIPE+SLPGESEIKNVITLEK+RLNQEWSTQFDPEHYLEKSRTEQSI          H  
Sbjct: 485  GIPEHSLPGESEIKNVITLEKDRLNQEWSTQFDPEHYLEKSRTEQSITSVAAVSTTSHGR 544

Query: 541  XXXXXXXXXXXXXXXXXXXXTAVXXXXXXXXXXXXXGTTVNSQTKFSTSRGSQQVTIDEQ 720
                                TAV             GT VNSQ KFSTSRGSQQVTIDEQ
Sbjct: 545  GRGRGRGRGRGRGRGRGSRSTAVEELDEDEDMDLDSGTRVNSQNKFSTSRGSQQVTIDEQ 604

Query: 721  DEYVEDVHFDLPXXXXXXXXXXXXXXDRMIAIDE 822
            DEYVEDVHFDLP              DRMI IDE
Sbjct: 605  DEYVEDVHFDLPKSSVTTRSRNSRARDRMIVIDE 638


>gb|EXX63045.1| Mre11p [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC35061.1| Double-strand break repair protein MRE11 [Rhizophagus irregularis
            DAOM 181602]
 gb|POG57902.1| Metallo-dependent phosphatase-like protein [Rhizophagus irregularis
            DAOM 181602=DAOM 197198]
          Length = 869

 Score =  400 bits (1029), Expect = e-131
 Identities = 208/274 (75%), Positives = 211/274 (77%)
 Frame = +1

Query: 1    REYNRIRTSLFEQEFKNRIANSDRNGQKIVTYHYKEAERSQNQQFVAPLDFGDEEISQKN 180
            REYNRIRTSLFEQEFKNRIANSD NGQKIVTYHYKEAERSQNQ+FVAPLDFGDEEISQKN
Sbjct: 365  REYNRIRTSLFEQEFKNRIANSDSNGQKIVTYHYKEAERSQNQRFVAPLDFGDEEISQKN 424

Query: 181  ATYFVIGQLAKTLKEKPSHFFPENGILNSIDLYVNKNDENAVRDFFESTREHMKNHLINH 360
            ATYFVIGQLAKTLKEKPSHFFPENGILNSIDLYVNKNDENAVRDFFESTREHMKNHLINH
Sbjct: 425  ATYFVIGQLAKTLKEKPSHFFPENGILNSIDLYVNKNDENAVRDFFESTREHMKNHLINH 484

Query: 361  GIPENSLPGESEIKNVITLEKERLNQEWSTQFDPEHYLEKSRTEQSIXXXXXXXXXXHXX 540
            GIPE+SLPGESEIKNVITLEK+RLNQEWSTQFDPEHYLEKSRTEQSI          H  
Sbjct: 485  GIPEHSLPGESEIKNVITLEKDRLNQEWSTQFDPEHYLEKSRTEQSITSVAAVSTTSHGR 544

Query: 541  XXXXXXXXXXXXXXXXXXXXTAVXXXXXXXXXXXXXGTTVNSQTKFSTSRGSQQVTIDEQ 720
                                TAV             GT VNSQ KFSTSRGSQQVTIDEQ
Sbjct: 545  GRGRGRGRGRGRGRGRGSRSTAVEELDEDEDMDLDSGTRVNSQNKFSTSRGSQQVTIDEQ 604

Query: 721  DEYVEDVHFDLPXXXXXXXXXXXXXXDRMIAIDE 822
            DEYVEDVHFDLP              DRMI IDE
Sbjct: 605  DEYVEDVHFDLPKSSVTTRSRNSRARDRMIVIDE 638


>gb|PKC17322.1| DNA repair exonuclease [Rhizophagus irregularis]
 gb|PKC71173.1| DNA repair exonuclease [Rhizophagus irregularis]
 gb|PKY13653.1| DNA repair exonuclease [Rhizophagus irregularis]
          Length = 653

 Score =  334 bits (857), Expect = e-107
 Identities = 163/167 (97%), Positives = 166/167 (99%)
 Frame = +1

Query: 1   REYNRIRTSLFEQEFKNRIANSDRNGQKIVTYHYKEAERSQNQQFVAPLDFGDEEISQKN 180
           REYNRIRTSLFEQEFKNRIANSD NGQKIVTYHYKEAERSQNQ+FVAPLDFGDEEISQKN
Sbjct: 365 REYNRIRTSLFEQEFKNRIANSDSNGQKIVTYHYKEAERSQNQRFVAPLDFGDEEISQKN 424

Query: 181 ATYFVIGQLAKTLKEKPSHFFPENGILNSIDLYVNKNDENAVRDFFESTREHMKNHLINH 360
           ATYFVIGQLAKTLKEKPSHFFPENGILNSIDLYVNKNDENAVRDFFESTREHMKNHLINH
Sbjct: 425 ATYFVIGQLAKTLKEKPSHFFPENGILNSIDLYVNKNDENAVRDFFESTREHMKNHLINH 484

Query: 361 GIPENSLPGESEIKNVITLEKERLNQEWSTQFDPEHYLEKSRTEQSI 501
           GIPE+SLPGESEIKNVITLEK+RLNQEWSTQFDPEHYLEKSRTEQSI
Sbjct: 485 GIPEHSLPGESEIKNVITLEKDRLNQEWSTQFDPEHYLEKSRTEQSI 531


>gb|PKY38327.1| DNA repair exonuclease [Rhizophagus irregularis]
          Length = 653

 Score =  332 bits (852), Expect = e-107
 Identities = 161/167 (96%), Positives = 166/167 (99%)
 Frame = +1

Query: 1   REYNRIRTSLFEQEFKNRIANSDRNGQKIVTYHYKEAERSQNQQFVAPLDFGDEEISQKN 180
           REYNRIRTSLFEQEFKNRIANSD NGQKIVTYHYKEAERSQNQ+FVAPLDFGDEEISQKN
Sbjct: 365 REYNRIRTSLFEQEFKNRIANSDSNGQKIVTYHYKEAERSQNQRFVAPLDFGDEEISQKN 424

Query: 181 ATYFVIGQLAKTLKEKPSHFFPENGILNSIDLYVNKNDENAVRDFFESTREHMKNHLINH 360
           ATYFVIGQLAKTLKEKPSHFFPENGILNSIDLYVNKNDENAVRDFFESTREHMKNHLINH
Sbjct: 425 ATYFVIGQLAKTLKEKPSHFFPENGILNSIDLYVNKNDENAVRDFFESTREHMKNHLINH 484

Query: 361 GIPENSLPGESEIKNVITLEKERLNQEWSTQFDPEHYLEKSRTEQSI 501
           GIPE+SLPGESEIKNVIT+EK+RLNQEWSTQFDPEHYLE+SRTEQSI
Sbjct: 485 GIPEHSLPGESEIKNVITMEKDRLNQEWSTQFDPEHYLERSRTEQSI 531


>gb|PKK77355.1| double-strand break repair protein MRE11, partial [Rhizophagus
           irregularis]
          Length = 398

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 33/34 (97%), Positives = 33/34 (97%)
 Frame = +1

Query: 1   REYNRIRTSLFEQEFKNRIANSDRNGQKIVTYHY 102
           REYNRIRTSLFEQEFKNRIANSD NGQKIVTYHY
Sbjct: 365 REYNRIRTSLFEQEFKNRIANSDSNGQKIVTYHY 398


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