BLASTX nr result

ID: Ophiopogon27_contig00042157 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00042157
         (1347 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKB92025.1| hypothetical protein RhiirA5_508419, partial [Rhi...   102   8e-23
dbj|GBC12823.1| hypothetical protein RIR_0164600 [Rhizophagus ir...   102   2e-19

>gb|PKB92025.1| hypothetical protein RhiirA5_508419, partial [Rhizophagus
            irregularis]
          Length = 107

 Score =  102 bits (255), Expect = 8e-23
 Identities = 59/89 (66%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
 Frame = -3

Query: 1300 MTQERVSSNNNSFAFVMEDPSKPRKYQLNFHLD---QFKEPTHIQPTMDQSLAXXXXXXX 1130
            M QERV  NNNSFAFVMEDPSKPRKYQLNF L+   QFKE   IQPTMDQSLA       
Sbjct: 1    MNQERV--NNNSFAFVMEDPSKPRKYQLNFQLNDNHQFKESPLIQPTMDQSLASHHLHNP 58

Query: 1129 XXXXXXHVDHNPPSRQPAQITLPSIKELM 1043
                  H+DHNP  RQ + ITLPSIKELM
Sbjct: 59   QHHSLHHIDHNPLPRQTSSITLPSIKELM 87


>dbj|GBC12823.1| hypothetical protein RIR_0164600 [Rhizophagus irregularis DAOM
            181602]
          Length = 1590

 Score =  102 bits (255), Expect = 2e-19
 Identities = 59/89 (66%), Positives = 62/89 (69%), Gaps = 3/89 (3%)
 Frame = -3

Query: 1300 MTQERVSSNNNSFAFVMEDPSKPRKYQLNFHLD---QFKEPTHIQPTMDQSLAXXXXXXX 1130
            M QERV  NNNSFAFVMEDPSKPRKYQLNF L+   QFKE   IQPTMDQSLA       
Sbjct: 1    MNQERV--NNNSFAFVMEDPSKPRKYQLNFQLNDNHQFKESPLIQPTMDQSLASHHLHNP 58

Query: 1129 XXXXXXHVDHNPPSRQPAQITLPSIKELM 1043
                  H+DHNP  RQ + ITLPSIKELM
Sbjct: 59   QHHSLHHIDHNPLPRQTSSITLPSIKELM 87



 Score = 78.2 bits (191), Expect = 2e-11
 Identities = 67/164 (40%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
 Frame = -3

Query: 583 HAHYQQPPLPS--HXXXXXXXXXXXXXQPSQRI---------SXXXXXXXXXXXXXXXXX 437
           H HYQQP LP                 QPSQR+                           
Sbjct: 283 HVHYQQPQLPQSQRSPPHQVQVLPQQMQPSQRMLHQQHQSHHHHLQHSLPMSHHQTTQSQ 342

Query: 436 XXXXQGYHPS--------------HHPHAYNNEA---VIERSQHDHQSSATSVAASRVPY 308
               QGYHP               HH + YNNE    V ER+Q DHQSSATSVA SR PY
Sbjct: 343 QQIQQGYHPPPPPPTHSLPPSSSHHHSNVYNNEVMAVVPERNQLDHQSSATSVA-SRAPY 401

Query: 307 NSHHYYPQVYSNNSVPPIMXXXXXXXXXSHGR--PLTEYPAVRD 182
           NSH+Y  QVY NN  PPI+         SHGR  PLTEY AVRD
Sbjct: 402 NSHYYSSQVYPNN--PPII-STPSHVTSSHGRNAPLTEYQAVRD 442


Top