BLASTX nr result

ID: Ophiopogon27_contig00042115 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon27_contig00042115
         (819 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC28330.1| ribonuclease p protein component [Rhizophagus ir...   119   6e-40
gb|POG78117.1| hypothetical protein GLOIN_2v1542117 [Rhizophagus...   140   2e-37

>dbj|GBC28330.1| ribonuclease p protein component [Rhizophagus irregularis DAOM
           181602]
          Length = 166

 Score =  119 bits (297), Expect(2) = 6e-40
 Identities = 62/111 (55%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
 Frame = +1

Query: 163 VKKTERXXXXXXXXXKKDTHSIDVDTIQKMITDRRNNIHGITYNSYFNLVVRRWHENDTY 342
           +KK ER         KKDTHSID DTIQKMITD++NNI GITY  YF L  R+W END Y
Sbjct: 1   MKKAERNLNLPPLLPKKDTHSIDTDTIQKMITDKKNNITGITYTDYFKLAARKWRENDAY 60

Query: 343 FTKKTREPIKNFRLQI-XXXXXXXXXXXXXXXXXXXXXESARFGLPIVGRE 492
           FTKKT+EPIKNFRLQI                      ESAR  LP+VGRE
Sbjct: 61  FTKKTKEPIKNFRLQIVVSKKNVSKLAVVRARIRRRIRESARLALPVVGRE 111



 Score = 74.7 bits (182), Expect(2) = 6e-40
 Identities = 41/58 (70%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
 Frame = +3

Query: 564 YDYLFFANLKVYSAPWPLLCSAVESAIGNPKLYNIEKSCVRSGASVGY-GSYAFKKGQ 734
           +DYLFFANLK Y+APW  LCSAVESAIGNPKLYNI KS        GY G YA KKGQ
Sbjct: 113 HDYLFFANLKSYNAPWLRLCSAVESAIGNPKLYNIGKS-----QGGGYAGKYAPKKGQ 165


>gb|POG78117.1| hypothetical protein GLOIN_2v1542117 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 213

 Score =  140 bits (354), Expect = 2e-37
 Identities = 74/120 (61%), Positives = 87/120 (72%), Gaps = 2/120 (1%)
 Frame = +1

Query: 37  MNKVKIL--MPFDMFRVIRTQCRFAFFSNTSKNKTNEPKEKIFHVKKTERXXXXXXXXXK 210
           M  VKIL  +PFD FR+I+ Q  FA  S+T++  TNE K+K F++KK ER         K
Sbjct: 1   MYNVKILKRIPFDNFRIIQIQRCFA--SDTNEIITNENKKKAFNMKKAERNLNLPPLLPK 58

Query: 211 KDTHSIDVDTIQKMITDRRNNIHGITYNSYFNLVVRRWHENDTYFTKKTREPIKNFRLQI 390
           KDTHSID DTIQKMITD++NNI GITY  YF L  R+W END YFTKKT+EPIKNFRLQI
Sbjct: 59  KDTHSIDTDTIQKMITDKKNNITGITYTDYFKLAARKWRENDAYFTKKTKEPIKNFRLQI 118



 Score = 83.2 bits (204), Expect = 2e-15
 Identities = 45/67 (67%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
 Frame = +3

Query: 537 LIFSGRKLGYDYLFFANLKVYSAPWPLLCSAVESAIGNPKLYNIEKSCVRSGASVGY-GS 713
           +++  RKLG+DYLFFANLK Y+APW  LCSAVESAIGNPKLYNI KS        GY G 
Sbjct: 151 VLWLNRKLGHDYLFFANLKSYNAPWLRLCSAVESAIGNPKLYNIGKS-----QGGGYAGK 205

Query: 714 YAFKKGQ 734
           YA KKGQ
Sbjct: 206 YAPKKGQ 212


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