BLASTX nr result
ID: Ophiopogon27_contig00041986
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00041986
(440 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EXX73447.1| Lsm5p [Rhizophagus irregularis DAOM 197198w] >gi|... 177 3e-55
gb|POG61852.1| nucleotide-diphospho-sugar transferase [Rhizophag... 177 3e-50
ref|XP_020905925.1| U6 snRNA-associated Sm-like protein LSm5 [Ex... 148 6e-44
gb|ORX90796.1| like-Sm ribonucleo protein, partial [Basidiobolus... 145 6e-43
gb|KFH64651.1| U6 snRNA-associated Sm-like protein LSm5 [Mortier... 145 1e-42
gb|ORY46126.1| LSM-domain-containing protein [Rhizoclosmatium gl... 145 1e-42
ref|XP_016609035.1| U6 snRNA-associated Sm-like protein LSm5 [Sp... 144 2e-42
gb|OAQ34099.1| LSM-domain-containing protein [Mortierella elonga... 144 3e-42
ref|XP_014804916.1| PREDICTED: U6 snRNA-associated Sm-like prote... 144 3e-42
ref|NP_036454.1| U6 snRNA-associated Sm-like protein LSm5 isofor... 144 5e-42
ref|XP_007500708.1| PREDICTED: U6 snRNA-associated Sm-like prote... 144 5e-42
ref|XP_004652812.1| PREDICTED: U6 snRNA-associated Sm-like prote... 144 5e-42
gb|ERE66738.1| U6 snRNA-associated Sm-like protein LSm5-like pro... 144 5e-42
gb|ORZ00365.1| LSM domain-containing protein [Syncephalastrum ra... 143 8e-42
emb|CDO73501.1| hypothetical protein BN946_scf185013.g136 [Trame... 143 8e-42
ref|XP_020783258.1| U6 snRNA-associated Sm-like protein LSm5 [Bo... 143 9e-42
ref|XP_022071008.1| U6 snRNA-associated Sm-like protein LSm5 [Ac... 143 1e-41
ref|XP_013870733.1| PREDICTED: U6 snRNA-associated Sm-like prote... 143 1e-41
ref|XP_008306040.1| PREDICTED: U6 snRNA-associated Sm-like prote... 143 1e-41
gb|ACQ58054.1| U6 snRNA-associated Sm-like protein LSm5 [Anoplop... 143 1e-41
>gb|EXX73447.1| Lsm5p [Rhizophagus irregularis DAOM 197198w]
dbj|GBC26607.1| Solute carrier family 25 (mitochondrial phosphate transporter),
member 23/24/25/41 [Rhizophagus irregularis DAOM 181602]
gb|PKC13270.1| LSM-domain-containing protein [Rhizophagus irregularis]
gb|PKC76441.1| LSM-domain-containing protein [Rhizophagus irregularis]
gb|PKK79617.1| LSM-domain-containing protein [Rhizophagus irregularis]
gb|PKY16703.1| LSM-domain-containing protein [Rhizophagus irregularis]
gb|PKY42148.1| LSM-domain-containing protein [Rhizophagus irregularis]
Length = 87
Score = 177 bits (448), Expect = 3e-55
Identities = 86/87 (98%), Positives = 87/87 (100%)
Frame = +2
Query: 11 MTTATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGR 190
MTTATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTE+ENTPEGR
Sbjct: 1 MTTATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEYENTPEGR 60
Query: 191 KTTKLDKILLNGNNITMLIPGGEGPES 271
KTTKLDKILLNGNNITMLIPGGEGPES
Sbjct: 61 KTTKLDKILLNGNNITMLIPGGEGPES 87
>gb|POG61852.1| nucleotide-diphospho-sugar transferase [Rhizophagus irregularis
DAOM 181602=DAOM 197198]
Length = 524
Score = 177 bits (448), Expect = 3e-50
Identities = 86/92 (93%), Positives = 90/92 (97%)
Frame = +2
Query: 11 MTTATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGR 190
MTTATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTE+ENTPEGR
Sbjct: 1 MTTATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEYENTPEGR 60
Query: 191 KTTKLDKILLNGNNITMLIPGGEGPES*ENVK 286
KTTKLDKILLNGNNITMLIPGGEGPE+ + +K
Sbjct: 61 KTTKLDKILLNGNNITMLIPGGEGPENKKQMK 92
>ref|XP_020905925.1| U6 snRNA-associated Sm-like protein LSm5 [Exaiptasia pallida]
gb|KXJ25703.1| U6 snRNA-associated Sm-like protein LSm5 [Exaiptasia pallida]
Length = 87
Score = 148 bits (374), Expect = 6e-44
Identities = 70/86 (81%), Positives = 79/86 (91%)
Frame = +2
Query: 11 MTTATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGR 190
M T T QLLPLELIDKCIGS+I ++MKS++E GTLLGFDDYVNMVLEDVTE+ENTPEG+
Sbjct: 1 MATETPQLLPLELIDKCIGSRIHIVMKSDKEIVGTLLGFDDYVNMVLEDVTEYENTPEGQ 60
Query: 191 KTTKLDKILLNGNNITMLIPGGEGPE 268
+ TKLD+ILLNGNNITMLIPGGEGPE
Sbjct: 61 RITKLDQILLNGNNITMLIPGGEGPE 86
>gb|ORX90796.1| like-Sm ribonucleo protein, partial [Basidiobolus meristosporus CBS
931.73]
Length = 83
Score = 145 bits (367), Expect = 6e-43
Identities = 70/82 (85%), Positives = 76/82 (92%)
Frame = +2
Query: 20 ATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGRKTT 199
AT+QLLPLELIDKCIGSKIWV+MKSEREFTG L GFDDYV+MVLEDVTE+E TPEG K+
Sbjct: 2 ATSQLLPLELIDKCIGSKIWVVMKSEREFTGILSGFDDYVSMVLEDVTEYETTPEGVKSM 61
Query: 200 KLDKILLNGNNITMLIPGGEGP 265
KLD+ILLNGNNI MLIPGGEGP
Sbjct: 62 KLDQILLNGNNICMLIPGGEGP 83
>gb|KFH64651.1| U6 snRNA-associated Sm-like protein LSm5 [Mortierella verticillata
NRRL 6337]
Length = 99
Score = 145 bits (367), Expect = 1e-42
Identities = 69/78 (88%), Positives = 74/78 (94%)
Frame = +2
Query: 35 LPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGRKTTKLDKI 214
LPLELID CIGSKIWV+MKSE+EFTGTL FDDYVNMVLEDVTEFENTPEGRKTTKL++I
Sbjct: 22 LPLELIDSCIGSKIWVVMKSEKEFTGTLKYFDDYVNMVLEDVTEFENTPEGRKTTKLEQI 81
Query: 215 LLNGNNITMLIPGGEGPE 268
LLNGNNI MLIPGGEGP+
Sbjct: 82 LLNGNNICMLIPGGEGPQ 99
>gb|ORY46126.1| LSM-domain-containing protein [Rhizoclosmatium globosum]
Length = 89
Score = 145 bits (366), Expect = 1e-42
Identities = 67/80 (83%), Positives = 75/80 (93%)
Frame = +2
Query: 26 NQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGRKTTKL 205
N +LPLEL+D+CIGSKIWVIMKS++EFTGTLLGFDD+VNMVLEDVTE+E TPEGR TKL
Sbjct: 9 NSILPLELVDRCIGSKIWVIMKSDKEFTGTLLGFDDFVNMVLEDVTEYETTPEGRVATKL 68
Query: 206 DKILLNGNNITMLIPGGEGP 265
D+ILLNGNNI MLIPGGEGP
Sbjct: 69 DQILLNGNNICMLIPGGEGP 88
>ref|XP_016609035.1| U6 snRNA-associated Sm-like protein LSm5 [Spizellomyces punctatus
DAOM BR117]
gb|KND00996.1| U6 snRNA-associated Sm-like protein LSm5 [Spizellomyces punctatus
DAOM BR117]
Length = 89
Score = 144 bits (364), Expect = 2e-42
Identities = 67/84 (79%), Positives = 75/84 (89%)
Frame = +2
Query: 14 TTATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGRK 193
TT LLPLEL+D+CIGS+IWV+MKSE+EF GTLLGFDD+VNMVLEDVTE+ENTPEGRK
Sbjct: 4 TTTAPALLPLELVDRCIGSRIWVVMKSEKEFAGTLLGFDDFVNMVLEDVTEYENTPEGRK 63
Query: 194 TTKLDKILLNGNNITMLIPGGEGP 265
TKLD+ILLNGNNI M IPGGE P
Sbjct: 64 VTKLDQILLNGNNICMFIPGGEPP 87
>gb|OAQ34099.1| LSM-domain-containing protein [Mortierella elongata AG-77]
Length = 100
Score = 144 bits (364), Expect = 3e-42
Identities = 68/78 (87%), Positives = 74/78 (94%)
Frame = +2
Query: 35 LPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGRKTTKLDKI 214
LPLELID CIGSKIWV+MKSE+EFTGTL FDDYVNMVLEDVTEFENTPEGRKTTKL++I
Sbjct: 23 LPLELIDSCIGSKIWVVMKSEKEFTGTLKYFDDYVNMVLEDVTEFENTPEGRKTTKLEQI 82
Query: 215 LLNGNNITMLIPGGEGPE 268
LLNGNNI MLIPGG+GP+
Sbjct: 83 LLNGNNICMLIPGGDGPQ 100
>ref|XP_014804916.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Calidris
pugnax]
ref|XP_018424565.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Nanorana
parkeri]
gb|ETE61994.1| U6 snRNA-associated Sm-like protein LSm5 [Ophiophagus hannah]
gb|PKU44077.1| u6 snrna-associated sm-like protein lsm5 [Limosa lapponica baueri]
Length = 91
Score = 144 bits (363), Expect = 3e-42
Identities = 67/86 (77%), Positives = 79/86 (91%)
Frame = +2
Query: 11 MTTATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGR 190
+TT +QLLPLEL+DKCIGS+I ++MKS++E GTLLGFDD+VNMVLEDVTEFE TPEGR
Sbjct: 5 VTTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGR 64
Query: 191 KTTKLDKILLNGNNITMLIPGGEGPE 268
+ TKLD+ILLNGNNITML+PGGEGPE
Sbjct: 65 RITKLDQILLNGNNITMLVPGGEGPE 90
>ref|NP_036454.1| U6 snRNA-associated Sm-like protein LSm5 isoform a [Homo sapiens]
ref|NP_079796.1| U6 snRNA-associated Sm-like protein LSm5 [Mus musculus]
ref|NP_001040018.1| U6 snRNA-associated Sm-like protein LSm5 [Bos taurus]
ref|NP_001100759.1| U6 snRNA-associated Sm-like protein LSm5 [Rattus norvegicus]
ref|NP_001126628.1| U6 snRNA-associated Sm-like protein LSm5 [Pongo abelii]
ref|NP_001244745.1| U6 snRNA-associated Sm-like protein LSm5 [Macaca mulatta]
ref|XP_001500867.1| U6 snRNA-associated Sm-like protein LSm5 [Equus caballus]
ref|XP_002713789.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Oryctolagus
cuniculus]
ref|XP_002751358.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X1
[Callithrix jacchus]
ref|XP_002921890.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Ailuropoda
melanoleuca]
ref|XP_003270553.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X1
[Nomascus leucogenys]
ref|XP_003407031.1| U6 snRNA-associated Sm-like protein LSm5 [Loxodonta africana]
ref|XP_003833447.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Pan paniscus]
ref|XP_003896179.1| U6 snRNA-associated Sm-like protein LSm5 isoform X1 [Papio anubis]
ref|XP_003930776.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Saimiri
boliviensis boliviensis]
ref|XP_003982968.1| U6 snRNA-associated Sm-like protein LSm5 [Felis catus]
ref|XP_004007967.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X1
[Ovis aries]
ref|XP_004045331.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X1
[Gorilla gorilla gorilla]
ref|XP_004269973.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Orcinus orca]
ref|XP_004329002.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Tursiops
truncatus]
ref|XP_004385378.1| U6 snRNA-associated Sm-like protein LSm5 [Trichechus manatus
latirostris]
ref|XP_004414617.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Odobenus
rosmarus divergens]
ref|XP_004418905.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Ceratotherium
simum simum]
ref|XP_004463357.1| U6 snRNA-associated Sm-like protein LSm5 [Dasypus novemcinctus]
ref|XP_004582441.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Ochotona
princeps]
ref|XP_004606960.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Sorex araneus]
ref|XP_004629609.1| U6 snRNA-associated Sm-like protein LSm5 [Octodon degus]
ref|XP_004639434.1| U6 snRNA-associated Sm-like protein LSm5 [Octodon degus]
ref|XP_004676899.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Condylura
cristata]
ref|XP_004762668.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Mustela
putorius furo]
ref|XP_004872266.1| U6 snRNA-associated Sm-like protein LSm5 isoform X2 [Heterocephalus
glaber]
ref|XP_005087473.1| U6 snRNA-associated Sm-like protein LSm5 isoform X1 [Mesocricetus
auratus]
ref|XP_005302784.1| U6 snRNA-associated Sm-like protein LSm5 isoform X1 [Chrysemys
picta bellii]
ref|XP_005360850.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Microtus
ochrogaster]
ref|XP_005319234.1| U6 snRNA-associated Sm-like protein LSm5 [Ictidomys
tridecemlineatus]
ref|XP_005415044.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Chinchilla
lanigera]
ref|XP_005549885.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X2
[Macaca fascicularis]
ref|XP_005673329.1| U6 snRNA-associated Sm-like protein LSm5 isoform X1 [Sus scrofa]
ref|XP_005679266.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Capra hircus]
ref|XP_005862990.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Myotis
brandtii]
ref|XP_005889185.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Bos mutus]
ref|XP_005960129.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Pantholops
hodgsonii]
ref|XP_006020902.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Alligator
sinensis]
ref|XP_006088783.1| U6 snRNA-associated Sm-like protein LSm5 isoform X1 [Myotis
lucifugus]
ref|XP_006187808.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Camelus ferus]
ref|XP_006201935.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Vicugna pacos]
ref|XP_006171552.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X1
[Tupaia chinensis]
ref|XP_006258260.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Alligator
mississippiensis]
ref|XP_006728932.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Leptonychotes
weddellii]
ref|XP_006832214.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Chrysochloris
asiatica]
ref|XP_006912112.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Pteropus
alecto]
ref|XP_007090591.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Panthera
tigris altaica]
ref|XP_006066357.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Bubalus
bubalis]
ref|XP_007175295.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Balaenoptera
acutorostrata scammoni]
ref|XP_007431668.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Python
bivittatus]
ref|XP_007447456.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Lipotes
vexillifer]
ref|XP_007531065.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Erinaceus
europaeus]
ref|XP_007632887.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X2
[Cricetulus griseus]
ref|XP_007943475.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Orycteropus
afer afer]
ref|XP_007979857.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Chlorocebus
sabaeus]
ref|XP_003230850.2| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Anolis
carolinensis]
ref|XP_008055146.1| U6 snRNA-associated Sm-like protein LSm5 isoform X1 [Carlito
syrichta]
ref|XP_008145672.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Eptesicus
fuscus]
ref|XP_008540343.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Equus
przewalskii]
ref|XP_008570666.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X1
[Galeopterus variegatus]
ref|XP_008684688.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Ursus
maritimus]
ref|XP_008825757.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Nannospalax
galili]
ref|XP_009896615.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Picoides
pubescens]
ref|XP_010183814.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Mesitornis
unicolor]
ref|XP_010386790.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Rhinopithecus
roxellana]
ref|XP_010351659.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X1
[Rhinopithecus roxellana]
ref|XP_010358502.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Rhinopithecus
roxellana]
ref|XP_010383213.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Rhinopithecus
roxellana]
ref|XP_010566286.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X1
[Haliaeetus leucocephalus]
ref|XP_010611275.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Fukomys
damarensis]
ref|XP_010827373.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X1
[Bison bison bison]
ref|XP_010969414.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Camelus
bactrianus]
ref|XP_010986365.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Camelus
dromedarius]
ref|XP_011360768.1| U6 snRNA-associated Sm-like protein LSm5 [Pteropus vampyrus]
ref|XP_011598284.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X2
[Aquila chrysaetos canadensis]
ref|XP_011827563.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X1
[Mandrillus leucophaeus]
ref|XP_011794013.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X1
[Colobus angolensis palliatus]
ref|XP_011938803.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X1
[Cercocebus atys]
ref|XP_011729688.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X2
[Macaca nemestrina]
ref|XP_011967577.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X1
[Ovis aries musimon]
ref|XP_012596742.1| U6 snRNA-associated Sm-like protein LSm5 [Microcebus murinus]
ref|XP_012659840.1| U6 snRNA-associated Sm-like protein LSm5 isoform X1 [Otolemur
garnettii]
ref|XP_012890578.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Dipodomys
ordii]
ref|XP_013051493.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Anser
cygnoides domesticus]
ref|XP_013803648.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X1
[Apteryx australis mantelli]
ref|XP_013974691.1| U6 snRNA-associated Sm-like protein LSm5 [Canis lupus familiaris]
ref|XP_014696569.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Equus asinus]
ref|XP_014920530.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Acinonyx
jubatus]
ref|XP_015261229.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Gekko
japonicus]
ref|XP_015345690.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Marmota
marmota marmota]
ref|XP_015667230.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X1
[Protobothrops mucrosquamatus]
ref|XP_016015748.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Rousettus
aegyptiacus]
ref|XP_016077734.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Miniopterus
natalensis]
ref|XP_016812731.1| U6 snRNA-associated Sm-like protein LSm5 isoform X1 [Pan
troglodytes]
ref|XP_017382624.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Cebus
capucinus imitator]
ref|XP_017519886.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X1
[Manis javanica]
ref|XP_017731896.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform X1
[Rhinopithecus bieti]
ref|XP_017721292.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Rhinopithecus
bieti]
ref|XP_017722066.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Rhinopithecus
bieti]
ref|XP_019299300.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Panthera
pardus]
ref|XP_019364554.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Gavialis
gangeticus]
ref|XP_019393822.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Crocodylus
porosus]
ref|XP_019484355.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Hipposideros
armiger]
ref|XP_019814357.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Bos indicus]
ref|XP_020035592.1| U6 snRNA-associated Sm-like protein LSm5 isoform X1 [Castor
canadensis]
ref|XP_020666931.1| U6 snRNA-associated Sm-like protein LSm5 isoform X1 [Pogona
vitticeps]
ref|XP_020764571.1| U6 snRNA-associated Sm-like protein LSm5 [Odocoileus virginianus
texanus]
ref|XP_021047040.1| U6 snRNA-associated Sm-like protein LSm5 [Mus pahari]
ref|XP_021021270.1| U6 snRNA-associated Sm-like protein LSm5 [Mus caroli]
ref|XP_021513555.1| U6 snRNA-associated Sm-like protein LSm5 [Meriones unguiculatus]
ref|XP_021545341.1| U6 snRNA-associated Sm-like protein LSm5 [Neomonachus
schauinslandi]
ref|XP_022359032.1| U6 snRNA-associated Sm-like protein LSm5 [Enhydra lutris kenyoni]
ref|XP_022439614.1| U6 snRNA-associated Sm-like protein LSm5 [Delphinapterus leucas]
ref|XP_023072340.1| U6 snRNA-associated Sm-like protein LSm5 [Piliocolobus
tephrosceles]
ref|XP_023041813.1| U6 snRNA-associated Sm-like protein LSm5 isoform X1 [Piliocolobus
tephrosceles]
ref|XP_024053335.1| U6 snRNA-associated Sm-like protein LSm5 [Terrapene mexicana
triunguis]
sp|Q9Y4Y9.3|LSM5_HUMAN RecName: Full=U6 snRNA-associated Sm-like protein LSm5
sp|P62322.2|LSM5_MOUSE RecName: Full=U6 snRNA-associated Sm-like protein LSm5
sp|Q5R628.3|LSM5_PONAB RecName: Full=U6 snRNA-associated Sm-like protein LSm5
sp|Q2HJH0.3|LSM5_BOVIN RecName: Full=U6 snRNA-associated Sm-like protein LSm5
pdb|3JCR|5 Chain 5, 3d Structure Determination Of The Human*u4/u6.u5*
Tri-snrnp Complex
pdb|5O9Z|RR Chain r, Cryo-em Structure Of A Pre-catalytic Human Spliceosome
Primed For Activation (b Complex)
gb|AAD56229.1|AF182291_1 U6 snRNA-associated Sm-like protein LSm5 [Homo sapiens]
emb|CAB45868.1| Lsm5 protein [Homo sapiens]
dbj|BAB26394.1| unnamed protein product [Mus musculus]
dbj|BAB27475.1| unnamed protein product [Mus musculus]
gb|AAH05938.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Homo
sapiens]
gb|AAH61085.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Mus
musculus]
gb|EAL24440.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Homo
sapiens]
emb|CAH92788.1| hypothetical protein [Pongo abelii]
gb|AAH48459.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Mus
musculus]
gb|AAI05405.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Bos
taurus]
gb|EAW93991.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae),
isoform CRA_b [Homo sapiens]
gb|AAI32627.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Mus
musculus]
gb|AAI32629.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Mus
musculus]
gb|EDL04710.1| mCG13108, isoform CRA_a [Mus musculus]
gb|EDL88056.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae)
(predicted), isoform CRA_c [Rattus norvegicus]
dbj|BAG73356.1| LSM5 homolog, U6 small nuclear RNA associated, partial [synthetic
construct]
tpg|DAA30584.1| TPA: U6 snRNA-associated Sm-like protein LSm5 [Bos taurus]
gb|ADQ33157.1| LSM5 homolog, U6 small nuclear RNA associated (S. cerevisiae),
partial [synthetic construct]
gb|EHH17394.1| U6 snRNA-associated Sm-like protein LSm5 [Macaca mulatta]
gb|ELR61182.1| U6 snRNA-associated Sm-like protein LSm5 [Bos mutus]
gb|AIC56091.1| LSM5, partial [synthetic construct]
gb|KFO19741.1| U6 snRNA-associated Sm-like protein LSm5 [Fukomys damarensis]
gb|KFQ36730.1| U6 snRNA-associated Sm-like LSm5 [Mesitornis unicolor]
gb|KFV65653.1| U6 snRNA-associated Sm-like LSm5 [Picoides pubescens]
gb|KYO43250.1| U6 snRNA-associated Sm-like protein LSm5 [Alligator
mississippiensis]
emb|SJX24492.1| unnamed protein product, partial [Human ORFeome Gateway entry
vector]
gb|PNI35767.1| LSM5 isoform 4 [Pan troglodytes]
gb|PNJ46970.1| LSM5 isoform 4 [Pongo abelii]
Length = 91
Score = 144 bits (362), Expect = 5e-42
Identities = 67/85 (78%), Positives = 78/85 (91%)
Frame = +2
Query: 14 TTATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGRK 193
TT +QLLPLEL+DKCIGS+I ++MKS++E GTLLGFDD+VNMVLEDVTEFE TPEGR+
Sbjct: 6 TTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 65
Query: 194 TTKLDKILLNGNNITMLIPGGEGPE 268
TKLD+ILLNGNNITML+PGGEGPE
Sbjct: 66 ITKLDQILLNGNNITMLVPGGEGPE 90
>ref|XP_007500708.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Monodelphis
domestica]
ref|XP_020824738.1| U6 snRNA-associated Sm-like protein LSm5 [Phascolarctos cinereus]
ref|XP_012399466.2| U6 snRNA-associated Sm-like protein LSm5 [Sarcophilus harrisii]
Length = 91
Score = 144 bits (362), Expect = 5e-42
Identities = 67/85 (78%), Positives = 78/85 (91%)
Frame = +2
Query: 14 TTATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGRK 193
TT +QLLPLEL+DKCIGS+I ++MKS++E GTLLGFDD+VNMVLEDVTEFE TPEGR+
Sbjct: 6 TTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 65
Query: 194 TTKLDKILLNGNNITMLIPGGEGPE 268
TKLD+ILLNGNNITML+PGGEGPE
Sbjct: 66 ITKLDQILLNGNNITMLVPGGEGPE 90
>ref|XP_004652812.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Jaculus
jaculus]
Length = 91
Score = 144 bits (362), Expect = 5e-42
Identities = 67/85 (78%), Positives = 78/85 (91%)
Frame = +2
Query: 14 TTATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGRK 193
TT +QLLPLEL+DKCIGS+I ++MKS++E GTLLGFDD+VNMVLEDVTEFE TPEGR+
Sbjct: 6 TTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 65
Query: 194 TTKLDKILLNGNNITMLIPGGEGPE 268
TKLD+ILLNGNNITML+PGGEGPE
Sbjct: 66 ITKLDQILLNGNNITMLVPGGEGPE 90
>gb|ERE66738.1| U6 snRNA-associated Sm-like protein LSm5-like protein [Cricetulus
griseus]
Length = 94
Score = 144 bits (362), Expect = 5e-42
Identities = 67/85 (78%), Positives = 78/85 (91%)
Frame = +2
Query: 14 TTATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGRK 193
TT +QLLPLEL+DKCIGS+I ++MKS++E GTLLGFDD+VNMVLEDVTEFE TPEGR+
Sbjct: 6 TTNPSQLLPLELVDKCIGSRIHIVMKSDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 65
Query: 194 TTKLDKILLNGNNITMLIPGGEGPE 268
TKLD+ILLNGNNITML+PGGEGPE
Sbjct: 66 ITKLDQILLNGNNITMLVPGGEGPE 90
>gb|ORZ00365.1| LSM domain-containing protein [Syncephalastrum racemosum]
Length = 84
Score = 143 bits (360), Expect = 8e-42
Identities = 66/82 (80%), Positives = 76/82 (92%)
Frame = +2
Query: 20 ATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGRKTT 199
+T+QLLPLELIDKCIGS+IWV+MK+++EFTG LLGFDDYVNMVLEDVTE+ENTPEG KT
Sbjct: 2 STSQLLPLELIDKCIGSRIWVVMKTDKEFTGKLLGFDDYVNMVLEDVTEYENTPEGYKTN 61
Query: 200 KLDKILLNGNNITMLIPGGEGP 265
K+D+ILLNGNNI LIPGG GP
Sbjct: 62 KVDQILLNGNNICTLIPGGTGP 83
>emb|CDO73501.1| hypothetical protein BN946_scf185013.g136 [Trametes cinnabarina]
gb|OSC99482.1| like-Sm ribonucleo protein [Trametes coccinea BRFM310]
Length = 85
Score = 143 bits (360), Expect = 8e-42
Identities = 66/81 (81%), Positives = 76/81 (93%)
Frame = +2
Query: 26 NQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGRKTTKL 205
+Q+LPLELID+CIGS+IWVIMKS+REFTGTLLGFDD+VNMVLEDVTE+ENTP+GRK TKL
Sbjct: 3 SQILPLELIDRCIGSRIWVIMKSDREFTGTLLGFDDFVNMVLEDVTEYENTPQGRKKTKL 62
Query: 206 DKILLNGNNITMLIPGGEGPE 268
++ LLNGNNI MLIPG GPE
Sbjct: 63 NQTLLNGNNICMLIPGSSGPE 83
>ref|XP_020783258.1| U6 snRNA-associated Sm-like protein LSm5 [Boleophthalmus
pectinirostris]
Length = 88
Score = 143 bits (360), Expect = 9e-42
Identities = 67/85 (78%), Positives = 78/85 (91%)
Frame = +2
Query: 14 TTATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGRK 193
TT +QLLPLEL+DKCIGS+I ++MK+++E GTLLGFDD+VNMVLEDVTEFE TPEGR+
Sbjct: 3 TTNPSQLLPLELVDKCIGSRIHIVMKTDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 62
Query: 194 TTKLDKILLNGNNITMLIPGGEGPE 268
TKLD+ILLNGNNITMLIPGGEGPE
Sbjct: 63 ITKLDQILLNGNNITMLIPGGEGPE 87
>ref|XP_022071008.1| U6 snRNA-associated Sm-like protein LSm5 [Acanthochromis
polyacanthus]
ref|XP_022044205.1| U6 snRNA-associated Sm-like protein LSm5 [Acanthochromis
polyacanthus]
ref|XP_023126685.1| U6 snRNA-associated Sm-like protein LSm5 [Amphiprion ocellaris]
Length = 91
Score = 143 bits (360), Expect = 1e-41
Identities = 67/85 (78%), Positives = 78/85 (91%)
Frame = +2
Query: 14 TTATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGRK 193
TT +QLLPLEL+DKCIGS+I ++MK+++E GTLLGFDD+VNMVLEDVTEFE TPEGR+
Sbjct: 6 TTNPSQLLPLELVDKCIGSRIHIVMKTDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 65
Query: 194 TTKLDKILLNGNNITMLIPGGEGPE 268
TKLD+ILLNGNNITMLIPGGEGPE
Sbjct: 66 ITKLDQILLNGNNITMLIPGGEGPE 90
>ref|XP_013870733.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Austrofundulus
limnaeus]
ref|XP_017269541.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Kryptolebias
marmoratus]
Length = 91
Score = 143 bits (360), Expect = 1e-41
Identities = 67/85 (78%), Positives = 78/85 (91%)
Frame = +2
Query: 14 TTATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGRK 193
TT +QLLPLEL+DKCIGS+I ++MK+++E GTLLGFDD+VNMVLEDVTEFE TPEGR+
Sbjct: 6 TTNPSQLLPLELVDKCIGSRIHIVMKTDKEIVGTLLGFDDFVNMVLEDVTEFELTPEGRR 65
Query: 194 TTKLDKILLNGNNITMLIPGGEGPE 268
TKLD+ILLNGNNITMLIPGGEGPE
Sbjct: 66 ITKLDQILLNGNNITMLIPGGEGPE 90
>ref|XP_008306040.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 [Cynoglossus
semilaevis]
Length = 91
Score = 143 bits (360), Expect = 1e-41
Identities = 67/85 (78%), Positives = 78/85 (91%)
Frame = +2
Query: 14 TTATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGRK 193
TT +QLLPLEL+DKCIGS+I ++MK+++E GTLLGFDD+VNMVLEDVTEFE TPEGR+
Sbjct: 6 TTNPSQLLPLELVDKCIGSRIHIVMKTDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 65
Query: 194 TTKLDKILLNGNNITMLIPGGEGPE 268
TKLD+ILLNGNNITMLIPGGEGPE
Sbjct: 66 ITKLDQILLNGNNITMLIPGGEGPE 90
>gb|ACQ58054.1| U6 snRNA-associated Sm-like protein LSm5 [Anoplopoma fimbria]
Length = 91
Score = 143 bits (360), Expect = 1e-41
Identities = 67/85 (78%), Positives = 78/85 (91%)
Frame = +2
Query: 14 TTATNQLLPLELIDKCIGSKIWVIMKSEREFTGTLLGFDDYVNMVLEDVTEFENTPEGRK 193
TT +QLLPLEL+DKCIGS+I ++MK+++E GTLLGFDD+VNMVLEDVTEFE TPEGR+
Sbjct: 6 TTNPSQLLPLELVDKCIGSRIHIVMKTDKEIVGTLLGFDDFVNMVLEDVTEFEITPEGRR 65
Query: 194 TTKLDKILLNGNNITMLIPGGEGPE 268
TKLD+ILLNGNNITMLIPGGEGPE
Sbjct: 66 ITKLDQILLNGNNITMLIPGGEGPE 90