BLASTX nr result
ID: Ophiopogon27_contig00041764
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon27_contig00041764
(1618 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|GBC41771.1| ankyrin repeat protein [Rhizophagus irregularis ... 796 0.0
gb|PKK78491.1| hypothetical protein RhiirC2_530844 [Rhizophagus ... 738 0.0
gb|PKY39487.1| hypothetical protein RhiirA4_337466 [Rhizophagus ... 488 e-168
gb|PKC75672.1| hypothetical protein RhiirA1_357538 [Rhizophagus ... 487 e-167
gb|PKC10206.1| ankyrin repeat protein, partial [Rhizophagus irre... 199 1e-58
pdb|4HQD|A Chain A, Crystal Structure of Engineered Protein. Nor... 110 1e-24
pdb|4GPM|A Chain A, Crystal Structure of Engineered Protein. Nor... 108 7e-24
pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Nor... 105 9e-23
pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With... 103 1e-22
pdb|5KBA|A Chain A, Computational Design of Self-Assembling Cycl... 104 2e-22
pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Nor... 104 2e-22
pdb|5HS0|A Chain A, Computationally Designed Cyclic Tetramer ank... 104 2e-22
gb|ACP49049.1| Ankyrin [Sulfolobus islandicus Y.N.15.51] 108 3e-22
gb|OZJ05688.1| hypothetical protein BZG36_01438 [Bifiguratus ade... 112 6e-22
pdb|5KWD|A Chain A, Computationally Designed Symmetric Homotetra... 101 2e-21
pdb|5HRY|A Chain A, Computationally Designed Cyclic Dimer Ank3c2... 101 2e-21
pdb|5EIL|A Chain A, Computational Design Of A High-affinity Meta... 100 4e-21
ref|XP_023933027.1| 26S proteasome non-ATPase regulatory subunit... 101 6e-21
pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal... 99 2e-20
pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal... 98 3e-20
>dbj|GBC41771.1| ankyrin repeat protein [Rhizophagus irregularis DAOM 181602]
Length = 1606
Score = 796 bits (2055), Expect = 0.0
Identities = 419/539 (77%), Positives = 422/539 (78%)
Frame = +1
Query: 1 GQLQDKKSKDEGNSRVSDSKLSRTQRKEQQLIRTFQSLQKQEARKQXXXXXXXXXXXXXX 180
GQLQDKKSKDE EARKQ
Sbjct: 1080 GQLQDKKSKDE------------------------------EARKQSSGGKRGRPRIRRD 1109
Query: 181 XXXXXXXXXXIYSSGTRRRSLRDGKRLNGEMHNNGARAFTSANDVLRMDLRFKDPSTGRT 360
IYSSGTRRRSLRDGKRLNGEMHNNGARAFTSANDVLRMDLRFKDPSTGRT
Sbjct: 1110 DNRNDNSGSNIYSSGTRRRSLRDGKRLNGEMHNNGARAFTSANDVLRMDLRFKDPSTGRT 1169
Query: 361 NLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGADVN 540
NLHLNAKRGNSEMVANMIEAGASYLINTKD NNRTALHEAAYEGHTTTVEILIALGADVN
Sbjct: 1170 NLHLNAKRGNSEMVANMIEAGASYLINTKDYNNRTALHEAAYEGHTTTVEILIALGADVN 1229
Query: 541 NKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARKRRDIVELLCDTL 720
+KDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNID KTPLDMARKRRDIVELLCDTL
Sbjct: 1230 SKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDDKTPLDMARKRRDIVELLCDTL 1289
Query: 721 ELDADEYLGSQTVETPNQMQIDSNXXXXXXXXXXXXXXXIPNTKKLKVEHRKNXXXXXXX 900
ELDADEYLG+QTVETPNQMQIDSN IPNTKKLKVEHRKN
Sbjct: 1290 ELDADEYLGNQTVETPNQMQIDSNEETSLSEDEFSDDESIPNTKKLKVEHRKNIELESKE 1349
Query: 901 XXXXXXXXXXXXXXXXXXQKFENTILEISNSDVDLFYTVQLAIDRPGFPITASTDPPSSP 1080
QKFE TILEISNSDVDLFYTVQLAIDRPGFPITASTDPPSSP
Sbjct: 1350 SDESDELIEVEVSESIEVQKFETTILEISNSDVDLFYTVQLAIDRPGFPITASTDPPSSP 1409
Query: 1081 SFVVDFQAELFLRYPLSTLLQKHPNLVRREVTYVEKERLWPCLRSIIWNPPKFKRPSELG 1260
SFVVDFQAELFLRYPLSTLLQKHPNLVRREVTYVEKERLWPCLRSIIWNPPKFKRPSELG
Sbjct: 1410 SFVVDFQAELFLRYPLSTLLQKHPNLVRREVTYVEKERLWPCLRSIIWNPPKFKRPSELG 1469
Query: 1261 ILEAEQREKFLIYKMHFVKFDQILEISNISKEDISTIPLDISDYTNNEMEDSDDLNGDVD 1440
ILEAEQREKFLIYKMHFVKFDQILEISNISK+DISTIPLDISDYTNNEMEDSDDLNGDVD
Sbjct: 1470 ILEAEQREKFLIYKMHFVKFDQILEISNISKDDISTIPLDISDYTNNEMEDSDDLNGDVD 1529
Query: 1441 CHAMEIDDFXXXXXXXXXXXXXXXXXQWVSMTDTNPIQPTIKNSQLKTSSGIIKKSYFK 1617
CHAMEIDDF QWVSMTDTN IQ IKNSQLKTSSGIIKKSYFK
Sbjct: 1530 CHAMEIDDFTSKLPLTPTSPTTPSTTQWVSMTDTNQIQSAIKNSQLKTSSGIIKKSYFK 1588
Score = 95.5 bits (236), Expect = 1e-16
Identities = 62/151 (41%), Positives = 81/151 (53%), Gaps = 1/151 (0%)
Frame = +1
Query: 247 DGKRLNGEMHNNGARAFTSANDVLRMDLRFKDPSTGRTNLHLNAKRGNSEMVANMIEAGA 426
DGK N N RA D+ D+ +D + G+TNLH + GN E V N+I G+
Sbjct: 911 DGKN-NNSTQPNKRRAGNKRKDIDENDVFARDRA-GQTNLHRACQEGNLERVINLINKGS 968
Query: 427 SYLINTKDNNNRTALHEAAYEGHTTTVEILIALGADVNNKDHK-GNTPLHDASHKGHGDV 603
IN +D+ T+LHEAA GH VE L+ GA+VN G+TPLHDAS KGH +V
Sbjct: 969 D--INAQDHAGWTSLHEAALAGHLNIVEFLLEQGAEVNAASFDDGDTPLHDASAKGHAEV 1026
Query: 604 VNILLTNNAKPDDKNIDGKTPLDMARKRRDI 696
V L+ A P+ N+ + P D A R I
Sbjct: 1027 VWALMQYGADPEKTNVKEEKPEDHATDDRVI 1057
>gb|PKK78491.1| hypothetical protein RhiirC2_530844 [Rhizophagus irregularis]
Length = 569
Score = 738 bits (1904), Expect = 0.0
Identities = 398/541 (73%), Positives = 405/541 (74%), Gaps = 2/541 (0%)
Frame = +1
Query: 1 GQLQDKKSKDEGNSRVSDSKLSRTQRKEQQLIRTFQSLQKQEARKQXXXXXXXXXXXXXX 180
GQLQDKKSKDEGNSRVSDSKLSRTQRKEQQLIRTFQSLQKQEARKQ
Sbjct: 50 GQLQDKKSKDEGNSRVSDSKLSRTQRKEQQLIRTFQSLQKQEARKQSSGGKRGRPRIRRD 109
Query: 181 XXXXXXXXXXIYSSGTRRRSLRDGKRLNGEMHNNGARAFTSANDVLRMDLRFKDPSTGRT 360
IYSSGTRRRSLRDGKRLNGEMHNNGARAFTSANDVLRMDLRFKDPSTGRT
Sbjct: 110 DNRNDNSGSNIYSSGTRRRSLRDGKRLNGEMHNNGARAFTSANDVLRMDLRFKDPSTGRT 169
Query: 361 NLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGAD-- 534
NLHLNAKR G++ V +I GA
Sbjct: 170 NLHLNAKR-----------------------------------GNSEMVANMIEAGASYL 194
Query: 535 VNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARKRRDIVELLCD 714
+N KD+ LHDASHKGHGDVVNILLTNNAKPDDKNID KTPLDMARKRRDIVELLCD
Sbjct: 195 INTKDYT----LHDASHKGHGDVVNILLTNNAKPDDKNIDDKTPLDMARKRRDIVELLCD 250
Query: 715 TLELDADEYLGSQTVETPNQMQIDSNXXXXXXXXXXXXXXXIPNTKKLKVEHRKNXXXXX 894
TLELDADEYLG+QTVETPNQMQIDSN IPNTKKLKVEHRKN
Sbjct: 251 TLELDADEYLGNQTVETPNQMQIDSNEETSLSEDEFSDDESIPNTKKLKVEHRKNIELES 310
Query: 895 XXXXXXXXXXXXXXXXXXXXQKFENTILEISNSDVDLFYTVQLAIDRPGFPITASTDPPS 1074
QKFE TILEISNSDVDLFYTVQLAIDRPGFPITASTDPPS
Sbjct: 311 KESDESDELIEVEVSESIEVQKFETTILEISNSDVDLFYTVQLAIDRPGFPITASTDPPS 370
Query: 1075 SPSFVVDFQAELFLRYPLSTLLQKHPNLVRREVTYVEKERLWPCLRSIIWNPPKFKRPSE 1254
SPSFVVDFQAELFLRYPLSTLLQKHPNLVRREVTYVEKERLWPCLRSIIWNPPKFKRPSE
Sbjct: 371 SPSFVVDFQAELFLRYPLSTLLQKHPNLVRREVTYVEKERLWPCLRSIIWNPPKFKRPSE 430
Query: 1255 LGILEAEQREKFLIYKMHFVKFDQILEISNISKEDISTIPLDISDYTNNEMEDSDDLNGD 1434
LGILEAEQREKFLIYKMHFVKFDQILEISNISK+DISTIPLDISDYTNNEMEDSDDLNGD
Sbjct: 431 LGILEAEQREKFLIYKMHFVKFDQILEISNISKDDISTIPLDISDYTNNEMEDSDDLNGD 490
Query: 1435 VDCHAMEIDDFXXXXXXXXXXXXXXXXXQWVSMTDTNPIQPTIKNSQLKTSSGIIKKSYF 1614
VDCHAMEIDDF QWVSMTDTN IQ IKNSQLKTSSGIIKKSYF
Sbjct: 491 VDCHAMEIDDFTSKLPLTPTSPTTPSTTQWVSMTDTNQIQSAIKNSQLKTSSGIIKKSYF 550
Query: 1615 K 1617
K
Sbjct: 551 K 551
>gb|PKY39487.1| hypothetical protein RhiirA4_337466 [Rhizophagus irregularis]
Length = 333
Score = 488 bits (1257), Expect = e-168
Identities = 253/315 (80%), Positives = 254/315 (80%)
Frame = +1
Query: 673 MARKRRDIVELLCDTLELDADEYLGSQTVETPNQMQIDSNXXXXXXXXXXXXXXXIPNTK 852
MARKRRDIVELLCDTLELDADEYLG+QTVETPNQMQIDSN IPNTK
Sbjct: 1 MARKRRDIVELLCDTLELDADEYLGNQTVETPNQMQIDSNEETSLSEDEFSDDESIPNTK 60
Query: 853 KLKVEHRKNXXXXXXXXXXXXXXXXXXXXXXXXXQKFENTILEISNSDVDLFYTVQLAID 1032
KLKVEHRKN QKFE TILEISNSDVDLFYTVQLAID
Sbjct: 61 KLKVEHRKNIELESKESDESDELIEVEVSESIEVQKFETTILEISNSDVDLFYTVQLAID 120
Query: 1033 RPGFPITASTDPPSSPSFVVDFQAELFLRYPLSTLLQKHPNLVRREVTYVEKERLWPCLR 1212
RPGFPITASTDPPSSPSFVVDFQAELFLRYPLSTLLQKHPNLVRREVTYVEKERLWPCLR
Sbjct: 121 RPGFPITASTDPPSSPSFVVDFQAELFLRYPLSTLLQKHPNLVRREVTYVEKERLWPCLR 180
Query: 1213 SIIWNPPKFKRPSELGILEAEQREKFLIYKMHFVKFDQILEISNISKEDISTIPLDISDY 1392
SIIWNPPKFKRPSELGILEAEQREKFLIYKMHFVKFDQILEISNISKEDISTIPLDISDY
Sbjct: 181 SIIWNPPKFKRPSELGILEAEQREKFLIYKMHFVKFDQILEISNISKEDISTIPLDISDY 240
Query: 1393 TNNEMEDSDDLNGDVDCHAMEIDDFXXXXXXXXXXXXXXXXXQWVSMTDTNPIQPTIKNS 1572
TNNEMEDSDDLNGDVDCHAMEIDDF QWVSMTDTN IQ IKNS
Sbjct: 241 TNNEMEDSDDLNGDVDCHAMEIDDFTSKLPLTPTSPTTPSTTQWVSMTDTNQIQSAIKNS 300
Query: 1573 QLKTSSGIIKKSYFK 1617
QLKTSSGIIKKSYFK
Sbjct: 301 QLKTSSGIIKKSYFK 315
>gb|PKC75672.1| hypothetical protein RhiirA1_357538 [Rhizophagus irregularis]
Length = 333
Score = 487 bits (1254), Expect = e-167
Identities = 252/315 (80%), Positives = 254/315 (80%)
Frame = +1
Query: 673 MARKRRDIVELLCDTLELDADEYLGSQTVETPNQMQIDSNXXXXXXXXXXXXXXXIPNTK 852
MARKRRDIVELLCDTLELDADEYLG+QTVETPNQMQIDSN IPNTK
Sbjct: 1 MARKRRDIVELLCDTLELDADEYLGNQTVETPNQMQIDSNEETSLSEDEFSDDESIPNTK 60
Query: 853 KLKVEHRKNXXXXXXXXXXXXXXXXXXXXXXXXXQKFENTILEISNSDVDLFYTVQLAID 1032
KLKVEHRKN QKFE TILEISNSDVDLFYTVQLAID
Sbjct: 61 KLKVEHRKNIELESKESDESDELIEVEVSESIEVQKFETTILEISNSDVDLFYTVQLAID 120
Query: 1033 RPGFPITASTDPPSSPSFVVDFQAELFLRYPLSTLLQKHPNLVRREVTYVEKERLWPCLR 1212
RPGFPITASTDPPSSPSFVVDFQAELFLRYPLSTLLQKHPNLVRREVTYVEKERLWPCLR
Sbjct: 121 RPGFPITASTDPPSSPSFVVDFQAELFLRYPLSTLLQKHPNLVRREVTYVEKERLWPCLR 180
Query: 1213 SIIWNPPKFKRPSELGILEAEQREKFLIYKMHFVKFDQILEISNISKEDISTIPLDISDY 1392
SIIWNPPKFKRPSELGILEAEQREKFLIYKMHFVKFDQILEISNISK+DISTIPLDISDY
Sbjct: 181 SIIWNPPKFKRPSELGILEAEQREKFLIYKMHFVKFDQILEISNISKDDISTIPLDISDY 240
Query: 1393 TNNEMEDSDDLNGDVDCHAMEIDDFXXXXXXXXXXXXXXXXXQWVSMTDTNPIQPTIKNS 1572
TNNEMEDSDDLNGDVDCHAMEIDDF QWVSMTDTN IQ IKNS
Sbjct: 241 TNNEMEDSDDLNGDVDCHAMEIDDFTSKLPLTPTSPTTPSTTQWVSMTDTNQIQSAIKNS 300
Query: 1573 QLKTSSGIIKKSYFK 1617
QLKTSSGIIKKSYFK
Sbjct: 301 QLKTSSGIIKKSYFK 315
>gb|PKC10206.1| ankyrin repeat protein, partial [Rhizophagus irregularis]
Length = 99
Score = 199 bits (505), Expect = 1e-58
Identities = 97/99 (97%), Positives = 98/99 (98%)
Frame = +1
Query: 322 MDLRFKDPSTGRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTT 501
MDLRFKDPSTGRTNLHLNAKRGNSEMVANMIEAGASYLINTKD NNRTALHEAAYEGHTT
Sbjct: 1 MDLRFKDPSTGRTNLHLNAKRGNSEMVANMIEAGASYLINTKDYNNRTALHEAAYEGHTT 60
Query: 502 TVEILIALGADVNNKDHKGNTPLHDASHKGHGDVVNILL 618
TVEILIALGADVN+KDHKGNTPLHDASHKGHGDVVNILL
Sbjct: 61 TVEILIALGADVNSKDHKGNTPLHDASHKGHGDVVNILL 99
>pdb|4HQD|A Chain A, Crystal Structure of Engineered Protein. Northeast
Structural Genomics Consortium Target OR265.
pdb|4HQD|B Chain B, Crystal Structure of Engineered Protein. Northeast
Structural Genomics Consortium Target OR265.
Length = 169
Score = 110 bits (276), Expect = 1e-24
Identities = 59/123 (47%), Positives = 82/123 (66%), Gaps = 2/123 (1%)
Frame = +1
Query: 346 STGRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIAL 525
S GRT LH AK G+ E+V +I GA +N KD++ RT LH AA EGH V++LI+
Sbjct: 35 SDGRTPLHYAAKEGHKEIVKLLISKGAD--VNAKDSDGRTPLHYAAKEGHKEIVKLLISK 92
Query: 526 GADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK--RRDIV 699
GADVN KD G TPLH A+ +GH ++V +L++ A + + DG+TPLD+AR+ +IV
Sbjct: 93 GADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNTSDSDGRTPLDLAREHGNEEIV 152
Query: 700 ELL 708
+LL
Sbjct: 153 KLL 155
Score = 98.2 bits (243), Expect = 4e-20
Identities = 52/113 (46%), Positives = 75/113 (66%), Gaps = 2/113 (1%)
Frame = +1
Query: 376 AKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGADVNNKDHK 555
A+ GN + V ++IE GA +N D++ RT LH AA EGH V++LI+ GADVN KD
Sbjct: 12 AENGNKDRVKDLIENGAD--VNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSD 69
Query: 556 GNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK--RRDIVELL 708
G TPLH A+ +GH ++V +L++ A + K+ DG+TPL A K ++IV+LL
Sbjct: 70 GRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLL 122
Score = 66.2 bits (160), Expect = 5e-09
Identities = 37/82 (45%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Frame = +1
Query: 469 LHEAAYEGHTTTVEILIALGADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKN 648
L EAA G+ V+ LI GADVN D G TPLH A+ +GH ++V +L++ A + K+
Sbjct: 8 LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKD 67
Query: 649 IDGKTPLDMARK--RRDIVELL 708
DG+TPL A K ++IV+LL
Sbjct: 68 SDGRTPLHYAAKEGHKEIVKLL 89
>pdb|4GPM|A Chain A, Crystal Structure of Engineered Protein. Northeast
Structural Genomics Consortium Target OR264.
pdb|4GPM|B Chain B, Crystal Structure of Engineered Protein. Northeast
Structural Genomics Consortium Target OR264.
Length = 169
Score = 108 bits (270), Expect = 7e-24
Identities = 57/123 (46%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
Frame = +1
Query: 346 STGRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIAL 525
S GRT LH A+ G+ E+V +I GA +N KD++ RT LH AA GH V++LI+
Sbjct: 35 SDGRTPLHHAAENGHKEVVKLLISKGAD--VNAKDSDGRTPLHHAAENGHKEVVKLLISK 92
Query: 526 GADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK--RRDIV 699
GADVN KD G TPLH A+ GH +VV +L++ A + + DG+TPLD+AR+ ++V
Sbjct: 93 GADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVV 152
Query: 700 ELL 708
+LL
Sbjct: 153 KLL 155
Score = 96.3 bits (238), Expect = 2e-19
Identities = 50/113 (44%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
Frame = +1
Query: 376 AKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGADVNNKDHK 555
A+ GN + V ++IE GA +N D++ RT LH AA GH V++LI+ GADVN KD
Sbjct: 12 AENGNKDRVKDLIENGAD--VNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSD 69
Query: 556 GNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK--RRDIVELL 708
G TPLH A+ GH +VV +L++ A + K+ DG+TPL A + +++V+LL
Sbjct: 70 GRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLL 122
Score = 65.1 bits (157), Expect = 1e-08
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +1
Query: 469 LHEAAYEGHTTTVEILIALGADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKN 648
L EAA G+ V+ LI GADVN D G TPLH A+ GH +VV +L++ A + K+
Sbjct: 8 LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKD 67
Query: 649 IDGKTPLDMARK--RRDIVELL 708
DG+TPL A + +++V+LL
Sbjct: 68 SDGRTPLHHAAENGHKEVVKLL 89
>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267.
pdb|4HB5|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or267.
Length = 169
Score = 105 bits (262), Expect = 9e-23
Identities = 56/123 (45%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
Frame = +1
Query: 346 STGRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIAL 525
S GRT LH A+ G+ E+V ++ GA N KD++ RT LH AA GH V++L++
Sbjct: 35 SDGRTPLHYAAENGHKEIVKLLLSKGADP--NAKDSDGRTPLHYAAENGHKEIVKLLLSK 92
Query: 526 GADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK--RRDIV 699
GAD N KD G TPLH A+ GH ++V +LL+ A P+ + DG+TPLD+AR+ +IV
Sbjct: 93 GADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIV 152
Query: 700 ELL 708
+LL
Sbjct: 153 KLL 155
Score = 93.2 bits (230), Expect = 2e-18
Identities = 54/133 (40%), Positives = 77/133 (57%), Gaps = 2/133 (1%)
Frame = +1
Query: 376 AKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGADVNNKDHK 555
A+ GN + V +++E GA N D++ RT LH AA GH V++L++ GAD N KD
Sbjct: 12 AENGNKDRVKDLLENGADP--NASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSD 69
Query: 556 GNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK--RRDIVELLCDTLELD 729
G TPLH A+ GH ++V +LL+ A P+ K+ DG+TPL A + ++IV+LL L
Sbjct: 70 GRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLL---LSKG 126
Query: 730 ADEYLGSQTVETP 768
AD TP
Sbjct: 127 ADPNTSDSDGRTP 139
Score = 65.9 bits (159), Expect = 7e-09
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Frame = +1
Query: 469 LHEAAYEGHTTTVEILIALGADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKN 648
L EAA G+ V+ L+ GAD N D G TPLH A+ GH ++V +LL+ A P+ K+
Sbjct: 8 LIEAAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKD 67
Query: 649 IDGKTPLDMARK--RRDIVELL 708
DG+TPL A + ++IV+LL
Sbjct: 68 SDGRTPLHYAAENGHKEIVKLL 89
>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four
Identical Consensus Repeats
Length = 126
Score = 103 bits (258), Expect = 1e-22
Identities = 57/123 (46%), Positives = 79/123 (64%), Gaps = 2/123 (1%)
Frame = +1
Query: 352 GRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGA 531
GRT LHL A+ G+ E+V ++EAGA +N KD N RT LH AA GH V++L+ GA
Sbjct: 2 GRTPLHLAARNGHLEVVKLLLEAGAD--VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 59
Query: 532 DVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK--RRDIVEL 705
DVN KD G TPLH A+ GH +VV +LL A + K+ +G+TPL +A + ++V+L
Sbjct: 60 DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKL 119
Query: 706 LCD 714
L +
Sbjct: 120 LLE 122
Score = 92.4 bits (228), Expect = 1e-18
Identities = 51/102 (50%), Positives = 65/102 (63%)
Frame = +1
Query: 325 DLRFKDPSTGRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTT 504
D+ KD + GRT LHL A+ G+ E+V ++EAGA +N KD N RT LH AA GH
Sbjct: 27 DVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGAD--VNAKDKNGRTPLHLAARNGHLEV 83
Query: 505 VEILIALGADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNA 630
V++L+ GADVN KD G TPLH A+ GH +VV +LL A
Sbjct: 84 VKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125
Score = 77.0 bits (188), Expect = 3e-13
Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
Frame = +1
Query: 454 NNRTALHEAAYEGHTTTVEILIALGADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAK 633
N RT LH AA GH V++L+ GADVN KD G TPLH A+ GH +VV +LL A
Sbjct: 1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 634 PDDKNIDGKTPLDMARK--RRDIVELLCDTLELDADEYLGSQTVETP 768
+ K+ +G+TPL +A + ++V+LL LE AD + TP
Sbjct: 61 VNAKDKNGRTPLHLAARNGHLEVVKLL---LEAGADVNAKDKNGRTP 104
>pdb|5KBA|A Chain A, Computational Design of Self-Assembling Cyclic Protein
Homooligomers
pdb|5KBA|B Chain B, Computational Design of Self-Assembling Cyclic Protein
Homooligomers
pdb|5KBA|C Chain C, Computational Design of Self-Assembling Cyclic Protein
Homooligomers
pdb|5KBA|D Chain D, Computational Design of Self-Assembling Cyclic Protein
Homooligomers
Length = 169
Score = 104 bits (260), Expect = 2e-22
Identities = 56/113 (49%), Positives = 73/113 (64%)
Frame = +1
Query: 346 STGRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIAL 525
S GRT LH A+ G++E+VA +IE GA +N KD++ RT LH AA GH V IL+
Sbjct: 46 SDGRTPLHHAAENGHAEVVALLIEKGAD--VNAKDSDGRTPLHHAAENGHDEVVLILLLK 103
Query: 526 GADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK 684
GADVN KD G TPLH A+ GH VV +L+ A + + DG+TPLD+AR+
Sbjct: 104 GADVNAKDSDGRTPLHHAAENGHKRVVLVLILAGADVNTSDSDGRTPLDLARE 156
Score = 92.4 bits (228), Expect = 4e-18
Identities = 49/101 (48%), Positives = 62/101 (61%)
Frame = +1
Query: 376 AKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGADVNNKDHK 555
A+ GN + V ++IE GA +N D++ RT LH AA GH V +LI GADVN KD
Sbjct: 23 AENGNKDRVKDLIENGAD--VNASDSDGRTPLHHAAENGHAEVVALLIEKGADVNAKDSD 80
Query: 556 GNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMA 678
G TPLH A+ GH +VV ILL A + K+ DG+TPL A
Sbjct: 81 GRTPLHHAAENGHDEVVLILLLKGADVNAKDSDGRTPLHHA 121
Score = 74.3 bits (181), Expect = 8e-12
Identities = 44/97 (45%), Positives = 56/97 (57%)
Frame = +1
Query: 325 DLRFKDPSTGRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTT 504
D+ KD S GRT LH A+ G+ E+V ++ GA +N KD++ RT LH AA GH
Sbjct: 73 DVNAKD-SDGRTPLHHAAENGHDEVVLILLLKGAD--VNAKDSDGRTPLHHAAENGHKRV 129
Query: 505 VEILIALGADVNNKDHKGNTPLHDASHKGHGDVVNIL 615
V +LI GADVN D G TPL A G+ +VV L
Sbjct: 130 VLVLILAGADVNTSDSDGRTPLDLAREHGNEEVVKAL 166
Score = 61.6 bits (148), Expect = 2e-07
Identities = 33/70 (47%), Positives = 42/70 (60%)
Frame = +1
Query: 469 LHEAAYEGHTTTVEILIALGADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKN 648
L EAA G+ V+ LI GADVN D G TPLH A+ GH +VV +L+ A + K+
Sbjct: 19 LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHAEVVALLIEKGADVNAKD 78
Query: 649 IDGKTPLDMA 678
DG+TPL A
Sbjct: 79 SDGRTPLHHA 88
>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266.
pdb|4GMR|B Chain B, Crystal Structure Of Engineered Protein. Northeast
Structural Genomics Consortium Target Or266.
Length = 169
Score = 104 bits (260), Expect = 2e-22
Identities = 55/123 (44%), Positives = 80/123 (65%), Gaps = 2/123 (1%)
Frame = +1
Query: 346 STGRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIAL 525
S G+T LHL A+ G+ E+V ++ GA N KD++ +T LH AA GH V++L++
Sbjct: 35 SDGKTPLHLAAENGHKEVVKLLLSQGADP--NAKDSDGKTPLHLAAENGHKEVVKLLLSQ 92
Query: 526 GADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK--RRDIV 699
GAD N KD G TPLH A+ GH +VV +LL+ A P+ + DG+TPLD+AR+ ++V
Sbjct: 93 GADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNTSDSDGRTPLDLAREHGNEEVV 152
Query: 700 ELL 708
+LL
Sbjct: 153 KLL 155
Score = 96.3 bits (238), Expect = 2e-19
Identities = 54/133 (40%), Positives = 79/133 (59%), Gaps = 2/133 (1%)
Frame = +1
Query: 376 AKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGADVNNKDHK 555
A+ GN + V +++E GA +N D++ +T LH AA GH V++L++ GAD N KD
Sbjct: 12 AENGNKDRVKDLLENGAD--VNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSD 69
Query: 556 GNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK--RRDIVELLCDTLELD 729
G TPLH A+ GH +VV +LL+ A P+ K+ DGKTPL +A + +++V+LL L
Sbjct: 70 GKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVKLL---LSQG 126
Query: 730 ADEYLGSQTVETP 768
AD TP
Sbjct: 127 ADPNTSDSDGRTP 139
Score = 70.1 bits (170), Expect = 2e-10
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Frame = +1
Query: 469 LHEAAYEGHTTTVEILIALGADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKN 648
L EAA G+ V+ L+ GADVN D G TPLH A+ GH +VV +LL+ A P+ K+
Sbjct: 8 LIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKD 67
Query: 649 IDGKTPLDMARK--RRDIVELL 708
DGKTPL +A + +++V+LL
Sbjct: 68 SDGKTPLHLAAENGHKEVVKLL 89
>pdb|5HS0|A Chain A, Computationally Designed Cyclic Tetramer ank1C4_7
pdb|5HS0|B Chain B, Computationally Designed Cyclic Tetramer ank1C4_7
Length = 166
Score = 104 bits (259), Expect = 2e-22
Identities = 57/126 (45%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
Frame = +1
Query: 352 GRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGA 531
GRT LH A+ G+ +V ++ GA +N KD++ RT LH AA GH T V +LI +GA
Sbjct: 37 GRTPLHHAAENGHLAVVLLLLLKGAD--VNAKDSDGRTPLHHAAENGHKTVVLLLILMGA 94
Query: 532 DVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK--RRDIVEL 705
DVN KD G TPLH A+ GH +VV +L+ A + + DG+TPLD+AR+ ++V+L
Sbjct: 95 DVNAKDSDGRTPLHHAAENGHKEVVKLLIRKGADVNTSDSDGRTPLDLAREHGNEEVVKL 154
Query: 706 LCDTLE 723
L LE
Sbjct: 155 LEKQLE 160
Score = 87.4 bits (215), Expect = 2e-16
Identities = 51/117 (43%), Positives = 70/117 (59%), Gaps = 2/117 (1%)
Frame = +1
Query: 364 LHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGADVNN 543
L L A+ G +E V +IE GA +N D++ RT LH AA GH V +L+ GADVN
Sbjct: 8 LILAAELGIAEAVRMLIEQGAD--VNASDDDGRTPLHHAAENGHLAVVLLLLLKGADVNA 65
Query: 544 KDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK--RRDIVELL 708
KD G TPLH A+ GH VV +L+ A + K+ DG+TPL A + +++V+LL
Sbjct: 66 KDSDGRTPLHHAAENGHKTVVLLLILMGADVNAKDSDGRTPLHHAAENGHKEVVKLL 122
>gb|ACP49049.1| Ankyrin [Sulfolobus islandicus Y.N.15.51]
Length = 359
Score = 108 bits (271), Expect = 3e-22
Identities = 70/167 (41%), Positives = 97/167 (58%), Gaps = 7/167 (4%)
Frame = +1
Query: 310 DVLRMDL-RFKDPST----GRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALH 474
DV+R+ L R DP+ G+T LH+ A+ G+ ++V ++E GA N KDNN +T LH
Sbjct: 185 DVVRVLLERGADPNAKDNNGQTPLHMAAQEGDVDVVRVLLERGADP--NAKDNNGQTPLH 242
Query: 475 EAAYEGHTTTVEILIALGADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNID 654
AA++G V +L+ GAD N KD+ G TPLH A+HKGH DVV +LL A P+ K+ +
Sbjct: 243 MAAHKGDVDVVRVLLERGADPNAKDNNGQTPLHMAAHKGHVDVVRVLLERGADPNAKDNN 302
Query: 655 GKTPLDMARKRR--DIVELLCDTLELDADEYLGSQTVETPNQMQIDS 789
G+TPL MA + D+V +L LE AD + P DS
Sbjct: 303 GQTPLHMAAHKGHVDVVRVL---LEHGADPRIADNGRHIPLDYAKDS 346
Score = 101 bits (251), Expect = 1e-19
Identities = 60/144 (41%), Positives = 85/144 (59%)
Frame = +1
Query: 346 STGRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIAL 525
S G T LH+ A+ G+ ++V ++E GA N KDNN +T LH AA++G V +L+
Sbjct: 136 SYGLTPLHMAAQIGDVDVVRVLLERGADP--NAKDNNGQTPLHMAAHKGDVDVVRVLLER 193
Query: 526 GADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARKRRDIVEL 705
GAD N KD+ G TPLH A+ +G DVV +LL A P+ K+ +G+TPL MA + D V++
Sbjct: 194 GADPNAKDNNGQTPLHMAAQEGDVDVVRVLLERGADPNAKDNNGQTPLHMAAHKGD-VDV 252
Query: 706 LCDTLELDADEYLGSQTVETPNQM 777
+ LE AD +TP M
Sbjct: 253 VRVLLERGADPNAKDNNGQTPLHM 276
Score = 60.8 bits (146), Expect = 3e-06
Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Frame = +1
Query: 310 DVLRMDL-RFKDPST----GRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALH 474
DV+R+ L R DP+ G+T LH+ A +G+ ++V ++E GA N KDNN +T LH
Sbjct: 251 DVVRVLLERGADPNAKDNNGQTPLHMAAHKGHVDVVRVLLERGADP--NAKDNNGQTPLH 308
Query: 475 EAAYEGHTTTVEILIALGADVNNKDHKGNTPLHDASHKGHGDVVNILLTNN 627
AA++GH V +L+ GAD D+ + PL A ++ L N+
Sbjct: 309 MAAHKGHVDVVRVLLEHGADPRIADNGRHIPLDYAKDSAIRSLLESALRNS 359
>gb|OZJ05688.1| hypothetical protein BZG36_01438 [Bifiguratus adelaidae]
Length = 3963
Score = 112 bits (279), Expect = 6e-22
Identities = 82/252 (32%), Positives = 122/252 (48%), Gaps = 3/252 (1%)
Frame = +1
Query: 10 QDKKSKDEGNSRVSDSK-LSRTQRKEQQLIRTFQSLQKQEARKQXXXXXXXXXXXXXXXX 186
+D GN S K LSR +RK QQ +RTFQ L++++ +K
Sbjct: 3378 EDSHDSVAGNPTESGEKHLSREERKLQQYMRTFQRLEQRQQKKAVSHTLGGRHRTPSRSK 3437
Query: 187 XXXXXXXXIYSSGTRRRSLRDGKRLNGEMHNNGARAFTSANDVLRMDLRFKDPSTGRTNL 366
S R+ D + E +++ D +R++ + KD TGRT+L
Sbjct: 3438 SSP-------SPAPESRAKEDQE----EDEQKDSKSRNKGLDSVRLNPKRKD-KTGRTDL 3485
Query: 367 HLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGADVNNK 546
H + +GN E V +++ GA +N DN T LHEA +GHT V +L++ GADVN K
Sbjct: 3486 HKYSAKGNLEFVRRLLDDGAD--VNITDNAGWTPLHEAVLKGHTNIVSLLLSRGADVNAK 3543
Query: 547 DHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMA--RKRRDIVELLCDTL 720
G +PLHDA +G ++V LL + A D +N D +T LD+A + ++V LL
Sbjct: 3544 GLGGESPLHDACEEGMVEIVKALLQHGADVDTRNSDARTALDLALEAENDNVVRLLKSHN 3603
Query: 721 ELDADEYLGSQT 756
D D+ QT
Sbjct: 3604 AQDKDDEQKRQT 3615
Score = 72.8 bits (177), Expect = 2e-09
Identities = 43/109 (39%), Positives = 60/109 (55%)
Frame = +1
Query: 352 GRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGA 531
G+T LH ++ +G+ E V +IE GA +N +DN LHEA+ GH VE L+ GA
Sbjct: 3222 GQTALHRSSGQGDLEEVKELIEMGAD--VNVQDNACWAPLHEASLNGHADVVEYLLQHGA 3279
Query: 532 DVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMA 678
DVN + + +TPLHDA H VV LL A + N G+ D++
Sbjct: 3280 DVNIRGYDDDTPLHDACQNEHVAVVRKLLIYGADHNLVNSQGEIAADVS 3328
Score = 63.5 bits (153), Expect = 1e-06
Identities = 34/78 (43%), Positives = 47/78 (60%)
Frame = +1
Query: 436 INTKDNNNRTALHEAAYEGHTTTVEILIALGADVNNKDHKGNTPLHDASHKGHGDVVNIL 615
I+ KD +TALH ++ +G V+ LI +GADVN +D+ PLH+AS GH DVV L
Sbjct: 3215 IDQKDKAGQTALHRSSGQGDLEEVKELIEMGADVNVQDNACWAPLHEASLNGHADVVEYL 3274
Query: 616 LTNNAKPDDKNIDGKTPL 669
L + A + + D TPL
Sbjct: 3275 LQHGADVNIRGYDDDTPL 3292
Score = 60.8 bits (146), Expect = 8e-06
Identities = 40/118 (33%), Positives = 58/118 (49%)
Frame = +1
Query: 322 MDLRFKDPSTGRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTT 501
+D KD S GR L A +G+ E + AGA ++ D+N R+ LHEAA+ G
Sbjct: 3081 IDPNAKDRS-GRPRLFTLASKGDLETFKLYVAAGAD--VHALDSNGRSPLHEAAFYGQKE 3137
Query: 502 TVEILIALGADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDM 675
V L+ G D + G+TPLH+A K VN+L+ + A N + P D+
Sbjct: 3138 IVRYLLERGGDPTPRSRVGDTPLHEACSKSQTACVNLLVEHGANIFAVNNRRRRPYDV 3195
>pdb|5KWD|A Chain A, Computationally Designed Symmetric Homotetramer
pdb|5KWD|B Chain B, Computationally Designed Symmetric Homotetramer
pdb|5KWD|C Chain C, Computationally Designed Symmetric Homotetramer
pdb|5KWD|D Chain D, Computationally Designed Symmetric Homotetramer
Length = 160
Score = 101 bits (252), Expect = 2e-21
Identities = 56/121 (46%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
Frame = +1
Query: 352 GRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGA 531
GRT LH A+ G+ +V ++E GA N KD++ RT LH AA GH VE L+ GA
Sbjct: 36 GRTPLHYAAENGHLIIVLLLLEKGADP--NAKDSDGRTPLHYAAENGHKEIVEALLEHGA 93
Query: 532 DVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK--RRDIVEL 705
D N KD G TPLH A+ GH ++V +LL+ A P+ + DG+TPLD+AR+ +IV+L
Sbjct: 94 DPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKL 153
Query: 706 L 708
L
Sbjct: 154 L 154
Score = 84.3 bits (207), Expect = 2e-15
Identities = 56/143 (39%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
Frame = +1
Query: 346 STGRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIAL 525
ST L + A+ G +V ++E GA N D + RT LH AA GH V +L+
Sbjct: 1 STEGKMLIIAAREGMIIVVIVLLEKGADP--NASDKDGRTPLHYAAENGHLIIVLLLLEK 58
Query: 526 GADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK--RRDIV 699
GAD N KD G TPLH A+ GH ++V LL + A P+ K+ DG+TPL A + ++IV
Sbjct: 59 GADPNAKDSDGRTPLHYAAENGHKEIVEALLEHGADPNAKDSDGRTPLHYAAENGHKEIV 118
Query: 700 ELLCDTLELDADEYLGSQTVETP 768
+LL L AD TP
Sbjct: 119 KLL---LSKGADPNTSDSDGRTP 138
>pdb|5HRY|A Chain A, Computationally Designed Cyclic Dimer Ank3c2_1
pdb|5HRY|B Chain B, Computationally Designed Cyclic Dimer Ank3c2_1
pdb|5HRY|C Chain C, Computationally Designed Cyclic Dimer Ank3c2_1
pdb|5HRY|D Chain D, Computationally Designed Cyclic Dimer Ank3c2_1
pdb|5HRY|E Chain E, Computationally Designed Cyclic Dimer Ank3c2_1
pdb|5HRY|F Chain F, Computationally Designed Cyclic Dimer Ank3c2_1
pdb|5HRY|G Chain G, Computationally Designed Cyclic Dimer Ank3c2_1
pdb|5HRY|H Chain H, Computationally Designed Cyclic Dimer Ank3c2_1
Length = 169
Score = 101 bits (252), Expect = 2e-21
Identities = 55/125 (44%), Positives = 80/125 (64%), Gaps = 2/125 (1%)
Frame = +1
Query: 346 STGRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIAL 525
S G+T LHL A+ G++++V ++E GA N KD++ +T LH AA GH V +L+
Sbjct: 35 SDGKTPLHLAAENGHAKVVLLLLEQGADP--NAKDSDGKTPLHLAAENGHAVVVALLLMH 92
Query: 526 GADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK--RRDIV 699
GAD N KD G TPLH A+ GH +VV +LL A P+ + DG+TPLD+AR+ ++V
Sbjct: 93 GADPNAKDSDGKTPLHLAAENGHEEVVILLLAMGADPNTSDSDGRTPLDLAREHGNEEVV 152
Query: 700 ELLCD 714
++L D
Sbjct: 153 KVLED 157
Score = 90.9 bits (224), Expect = 1e-17
Identities = 54/133 (40%), Positives = 75/133 (56%), Gaps = 2/133 (1%)
Frame = +1
Query: 376 AKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGADVNNKDHK 555
A+ GN + V +++E GA +N D++ +T LH AA GH V +L+ GAD N KD
Sbjct: 12 AENGNKDRVKDLLENGAD--VNASDSDGKTPLHLAAENGHAKVVLLLLEQGADPNAKDSD 69
Query: 556 GNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK--RRDIVELLCDTLELD 729
G TPLH A+ GH VV +LL + A P+ K+ DGKTPL +A + ++V LL L +
Sbjct: 70 GKTPLHLAAENGHAVVVALLLMHGADPNAKDSDGKTPLHLAAENGHEEVVILL---LAMG 126
Query: 730 ADEYLGSQTVETP 768
AD TP
Sbjct: 127 ADPNTSDSDGRTP 139
Score = 65.1 bits (157), Expect = 1e-08
Identities = 35/70 (50%), Positives = 43/70 (61%)
Frame = +1
Query: 469 LHEAAYEGHTTTVEILIALGADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKN 648
L EAA G+ V+ L+ GADVN D G TPLH A+ GH VV +LL A P+ K+
Sbjct: 8 LIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHAKVVLLLLEQGADPNAKD 67
Query: 649 IDGKTPLDMA 678
DGKTPL +A
Sbjct: 68 SDGKTPLHLA 77
>pdb|5EIL|A Chain A, Computational Design Of A High-affinity Metalloprotein
Homotrimer Containing A Metal Chelating Non-canonical
Amino Acid
pdb|5EIL|B Chain B, Computational Design Of A High-affinity Metalloprotein
Homotrimer Containing A Metal Chelating Non-canonical
Amino Acid
pdb|5EIL|C Chain C, Computational Design Of A High-affinity Metalloprotein
Homotrimer Containing A Metal Chelating Non-canonical
Amino Acid
Length = 159
Score = 100 bits (249), Expect = 4e-21
Identities = 54/121 (44%), Positives = 76/121 (62%), Gaps = 2/121 (1%)
Frame = +1
Query: 352 GRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGA 531
G T LH A G+ E+V ++ GA N KD++ RT LH AA GH V++L++ GA
Sbjct: 37 GLTPLHAAAMAGHKEIVKLLLSKGADP--NAKDSDGRTPLHYAAENGHKEIVKLLLSKGA 94
Query: 532 DVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK--RRDIVEL 705
D N KD G TPLH A+ GH ++V +LL+ A P+ + DG+TPLD+AR+ +IV+L
Sbjct: 95 DPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKL 154
Query: 706 L 708
L
Sbjct: 155 L 155
Score = 85.5 bits (210), Expect = 8e-16
Identities = 51/130 (39%), Positives = 72/130 (55%), Gaps = 2/130 (1%)
Frame = +1
Query: 385 GNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGADVNNKDHKGNT 564
G+ E V +++ GA N D + T LH AA GH V++L++ GAD N KD G T
Sbjct: 15 GSKEAVKVLLDLGADP--NASDEDGLTPLHAAAMAGHKEIVKLLLSKGADPNAKDSDGRT 72
Query: 565 PLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK--RRDIVELLCDTLELDADE 738
PLH A+ GH ++V +LL+ A P+ K+ DG+TPL A + ++IV+LL L AD
Sbjct: 73 PLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVKLL---LSKGADP 129
Query: 739 YLGSQTVETP 768
TP
Sbjct: 130 NTSDSDGRTP 139
>ref|XP_023933027.1| 26S proteasome non-ATPase regulatory subunit 10-like [Lingula
anatina]
Length = 200
Score = 101 bits (251), Expect = 6e-21
Identities = 62/140 (44%), Positives = 87/140 (62%), Gaps = 2/140 (1%)
Frame = +1
Query: 352 GRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGA 531
G T LHL A RGN++MV ++++GA +N +D+ T LHEAA +GH V++L+A GA
Sbjct: 35 GLTPLHLAALRGNTDMVKLLLDSGAK--VNAEDSCGSTPLHEAADKGHEDIVKLLLAYGA 92
Query: 532 DVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMAR--KRRDIVEL 705
D N + G TPLH A+ GHGD+V +LL + A P+ N G+TPL MA D V+L
Sbjct: 93 DPNITNKMGLTPLHWAACGGHGDIVKLLLEHGADPNITNKWGRTPLHMAAMYDHEDSVKL 152
Query: 706 LCDTLELDADEYLGSQTVET 765
L LE AD ++ ++ ET
Sbjct: 153 L---LEHGADPHITAEHKET 169
Score = 62.8 bits (151), Expect = 1e-07
Identities = 56/168 (33%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Frame = +1
Query: 223 GTRRRSLRDGKR-LNGE---------MHNNGARAFTSANDVLRMDLRFK---DPSTGRTN 363
G +R LRDG+ +NG+ +H R T +L +D K + S G T
Sbjct: 13 GVVKRLLRDGRYDVNGKYTYVWGLTPLHLAALRGNTDMVKLL-LDSGAKVNAEDSCGSTP 71
Query: 364 LHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGADVNN 543
LH A +G+ ++V ++ GA I K T LH AA GH V++L+ GAD N
Sbjct: 72 LHEAADKGHEDIVKLLLAYGADPNITNK--MGLTPLHWAACGGHGDIVKLLLEHGADPNI 129
Query: 544 KDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARKR 687
+ G TPLH A+ H D V +LL + A P +T D A K+
Sbjct: 130 TNKWGRTPLHMAAMYDHEDSVKLLLEHGADPHITAEHKETAYDKAEKK 177
>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEH|B Chain B, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEH|C Chain C, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
Length = 157
Score = 98.6 bits (244), Expect = 2e-20
Identities = 58/130 (44%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Frame = +1
Query: 325 DLRFKDPSTGRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTT 504
D+ KD G T LHL A+ G+ E+V +++AGA +N KD + T LH AA EGH
Sbjct: 27 DVNAKDKD-GYTPLHLAAREGHLEIVEVLLKAGAD--VNAKDKDGYTPLHLAAREGHLEI 83
Query: 505 VEILIALGADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK 684
VE+L+ GADVN KD G TPLH A+ +GH ++V +LL A + ++ GKTP D+A +
Sbjct: 84 VEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAIR 143
Query: 685 --RRDIVELL 708
DI E+L
Sbjct: 144 EGHEDIAEVL 153
Score = 85.9 bits (211), Expect = 5e-16
Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 2/138 (1%)
Frame = +1
Query: 376 AKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGADVNNKDHK 555
A+ G + V ++ GA +N KD + T LH AA EGH VE+L+ GADVN KD
Sbjct: 10 ARAGQDDEVRILMANGAD--VNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKD 67
Query: 556 GNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK--RRDIVELLCDTLELD 729
G TPLH A+ +GH ++V +LL A + K+ DG TPL +A + +IVE+L L+
Sbjct: 68 GYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVL---LKAG 124
Query: 730 ADEYLGSQTVETPNQMQI 783
AD + +TP + I
Sbjct: 125 ADVNAQDKFGKTPFDLAI 142
Score = 65.9 bits (159), Expect = 5e-09
Identities = 43/97 (44%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Frame = +1
Query: 469 LHEAAYEGHTTTVEILIALGADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKN 648
L EAA G V IL+A GADVN KD G TPLH A+ +GH ++V +LL A + K+
Sbjct: 6 LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 65
Query: 649 IDGKTPLDMARK--RRDIVELL----CDTLELDADEY 741
DG TPL +A + +IVE+L D D D Y
Sbjct: 66 KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGY 102
>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|B Chain B, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|C Chain C, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
pdb|2XEE|D Chain D, Structural Determinants For Improved Thermal Stability Of
Designed Ankyrin Repeat Proteins With A Redesigned C-
Capping Module.
Length = 157
Score = 98.2 bits (243), Expect = 3e-20
Identities = 58/130 (44%), Positives = 79/130 (60%), Gaps = 2/130 (1%)
Frame = +1
Query: 325 DLRFKDPSTGRTNLHLNAKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTT 504
D+ KD G T LHL A+ G+ E+V +++AGA +N KD + T LH AA EGH
Sbjct: 27 DVNAKDKD-GYTPLHLAAREGHLEIVEVLLKAGAD--VNAKDKDGYTPLHLAAREGHLEI 83
Query: 505 VEILIALGADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMA-- 678
VE+L+ GADVN KD G TPLH A+ +GH ++V +LL A + ++ GKTP D+A
Sbjct: 84 VEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFDLAID 143
Query: 679 RKRRDIVELL 708
DI E+L
Sbjct: 144 NGNEDIAEVL 153
Score = 88.6 bits (218), Expect = 6e-17
Identities = 56/140 (40%), Positives = 80/140 (57%), Gaps = 2/140 (1%)
Frame = +1
Query: 376 AKRGNSEMVANMIEAGASYLINTKDNNNRTALHEAAYEGHTTTVEILIALGADVNNKDHK 555
A+ G + V ++ GA +N KD + T LH AA EGH VE+L+ GADVN KD
Sbjct: 10 ARAGQDDEVRILMANGAD--VNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKD 67
Query: 556 GNTPLHDASHKGHGDVVNILLTNNAKPDDKNIDGKTPLDMARK--RRDIVELLCDTLELD 729
G TPLH A+ +GH ++V +LL A + K+ DG TPL +A + +IVE+L L+
Sbjct: 68 GYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVL---LKAG 124
Query: 730 ADEYLGSQTVETPNQMQIDS 789
AD + +TP + ID+
Sbjct: 125 ADVNAQDKFGKTPFDLAIDN 144
Score = 65.9 bits (159), Expect = 5e-09
Identities = 43/97 (44%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Frame = +1
Query: 469 LHEAAYEGHTTTVEILIALGADVNNKDHKGNTPLHDASHKGHGDVVNILLTNNAKPDDKN 648
L EAA G V IL+A GADVN KD G TPLH A+ +GH ++V +LL A + K+
Sbjct: 6 LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKD 65
Query: 649 IDGKTPLDMARK--RRDIVELL----CDTLELDADEY 741
DG TPL +A + +IVE+L D D D Y
Sbjct: 66 KDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGY 102